| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317460
Identifier: 74317460
GI number: 74317460
Start: 1529144
End: 1529713
Strand: Direct
Name: 74317460
Synonym: Tbd_1442
Alternate gene names: NA
Gene position: 1529144-1529713 (Clockwise)
Preceding gene: 74317459
Following gene: 74317461
Centisome position: 52.55
GC content: 71.4
Gene sequence:
>570_bases ATGCCGACTGGTGAGCGCGGCCAACGCGGCTTCACCTATCTCTACGTGCTGCTGATGATCGCGCTCGTCAGCCTCGGCCT GGCTGCGGCGGGCACGGTCTGGCGCACCGAGGCACGGCGGGCGAACGAAGCCGAATTGCTGTTCGTCGGCGCGCAGTACC GCCAGGCCATCGAGAGCTACTACACGCTCGACCCGGGCCTGCCGCGGCTGCCGCAAAGCGTCGCCGACCTGCTCGAGGAC CGGCGCCGGCCCGAGCCGGTACGCCATCTGCGGCGGGCCTACCGCGATCCGATCACCGGCAGGGAAATGCAGTCCATCGT GGCGGAGGGCGAAGGCATCGTCGGCATGATGAGCGCAGCGCCCGGCCGTCCACTCAAGCAGGCGGGCTTCCCGCCCGAAG AGCAGGACTTCAGCGATGCCGAAAGCTACGCCGAGTGGCGCTTCGTCTTCGTCCCGCCGACCGCGCCGCGTGCCGACGGC GCATTCCCCGACGCGGCGGGCGCGCCCGGCCCGGCGCTGGACGGCTCAGGGCGCATGGACGCCCCCATCGAGCCCGGATA CCCGCGATGA
Upstream 100 bases:
>100_bases GCCGACACCTGGCAACCGCTGCCCCCCCCGGACCCCGAATCGGGCGGCGTGTACGACGTCAGGAGCGGCGCCCCCGGCAC GGCGCGCGACGGGAGCAGCT
Downstream 100 bases:
>100_bases AACGCAGCCCCTTCCTGCAGCCGCTTTCCCGCGAACACCATGCCGCGCTCGTGCTGGCGCGCGCCTGCGAGCGGGCAGGC CGTTCGGGAAACGCCGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MPTGERGQRGFTYLYVLLMIALVSLGLAAAGTVWRTEARRANEAELLFVGAQYRQAIESYYTLDPGLPRLPQSVADLLED RRRPEPVRHLRRAYRDPITGREMQSIVAEGEGIVGMMSAAPGRPLKQAGFPPEEQDFSDAESYAEWRFVFVPPTAPRADG AFPDAAGAPGPALDGSGRMDAPIEPGYPR
Sequences:
>Translated_189_residues MPTGERGQRGFTYLYVLLMIALVSLGLAAAGTVWRTEARRANEAELLFVGAQYRQAIESYYTLDPGLPRLPQSVADLLED RRRPEPVRHLRRAYRDPITGREMQSIVAEGEGIVGMMSAAPGRPLKQAGFPPEEQDFSDAESYAEWRFVFVPPTAPRADG AFPDAAGAPGPALDGSGRMDAPIEPGYPR >Mature_188_residues PTGERGQRGFTYLYVLLMIALVSLGLAAAGTVWRTEARRANEAELLFVGAQYRQAIESYYTLDPGLPRLPQSVADLLEDR RRPEPVRHLRRAYRDPITGREMQSIVAEGEGIVGMMSAAPGRPLKQAGFPPEEQDFSDAESYAEWRFVFVPPTAPRADGA FPDAAGAPGPALDGSGRMDAPIEPGYPR
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20690; Mature: 20558
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTGERGQRGFTYLYVLLMIALVSLGLAAAGTVWRTEARRANEAELLFVGAQYRQAIESY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEECHHHHHHHHHH YTLDPGLPRLPQSVADLLEDRRRPEPVRHLRRAYRDPITGREMQSIVAEGEGIVGMMSAA HCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEECCCC PGRPLKQAGFPPEEQDFSDAESYAEWRFVFVPPTAPRADGAFPDAAGAPGPALDGSGRMD CCCCHHHCCCCCCCCCCHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC APIEPGYPR CCCCCCCCC >Mature Secondary Structure PTGERGQRGFTYLYVLLMIALVSLGLAAAGTVWRTEARRANEAELLFVGAQYRQAIESY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEECHHHHHHHHHH YTLDPGLPRLPQSVADLLEDRRRPEPVRHLRRAYRDPITGREMQSIVAEGEGIVGMMSAA HCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEECCCC PGRPLKQAGFPPEEQDFSDAESYAEWRFVFVPPTAPRADGAFPDAAGAPGPALDGSGRMD CCCCHHHCCCCCCCCCCHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC APIEPGYPR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA