| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317441
Identifier: 74317441
GI number: 74317441
Start: 1513147
End: 1514475
Strand: Reverse
Name: 74317441
Synonym: Tbd_1423
Alternate gene names: NA
Gene position: 1514475-1513147 (Counterclockwise)
Preceding gene: 74317448
Following gene: 74317438
Centisome position: 52.05
GC content: 66.89
Gene sequence:
>1329_bases ATGAAGTATTCCGCCCTCGTCCTGACGCTGGCAGCCGCTTTCGCGGCACAGGTCCACGCCGGTTCCGCCGTCGAAGGACC CATGGCCTTCACCCCCATCGCCGCGTCCGCCTATGGCATGGACGCCGATCCCAACATCGCGACCGAACCCTGGCTTATCC CTGAGGGCTACGTCCAGTCCATCGTCTCTGACGAAAGCGCGCTCGACCTCTATCTGGCGAACGACTGGAATGACATGAAC ACGGCCAACGAAACCGGCAAGCACGCAGGCCGCTACCTGTATCGCACCCACGAGGTCCGCGGCGCGAACTCGGCGCGTGT CGACGGCGGGAGCGGCGGCGCGGTGTCGGTGGTCGATCTGAAGACCGGCGTCGCCAAGGAAGTGGTCGGACGCGCCGACT GGGAAGCGCTCGACGGCATCCTGTGGACGCCGTGGCAGACCCTCCTGTTCGCCGAGGAAACTGGCGCGGCCGCGCTGCCC GACCCAGCGCACCCGGCGGCGACGGCCGGCCTCGTCTATGAGCTCAAGCTCGATTCCCATAACCCTGCCGTCGCCGAGCG CGTGACCGTGCGGCCGCTGCTCGGTGCGCTCGCCCATGAGGGCATCGAAACCGACGCCGAGGGCAACGTGTACGTCATCG ACGAGGACCGCAAGGGCGCGATCTACAAGTTCGTGCCGACGAGCTACGGGGACCTCTCGGCCGGCCAGCTGTACGCCTTG CGCGTCCGGAACGGCGCGAAGACCGGCGAGGCCGACTGGGTCGCGCTCGACATGAACCAGGTGCAGATCAAGGCGAACGT CGCGGCGCGCGCGGTCGGCGCCACCGAGTACTGCCGTCCCGAAGACCTCGAACGCATCGCCGGCACGCTCTACGTCGCAC TGACCTGCGAAGACGTCGATGACGCGGCGAACACCAACGGTCGGGGCGCGGTCATGGCGATCGAGCTCGGCGACAAACCG CGCACCAGCTATGTCGTTTCCGCCGGCAAGAATGCGCCGATCGAGGATCAGACCACGGGCCTCACCGGCTTCAAGGGCCC GGACAACCTGGCGAACGGGCCGGACGGCAAGCTCTGGATCGTCGAGGACAACGCCCACAGCGACATCTGGGTCTACGACC CGCGCTCGAAGGATGCCAACCGCGACGGCTACCGTGATGGCGTGCATCTCTTCGCATCGCTGAAAGACAAGCCCGCCGAA GGCTCGGGCATCTACTTCGGCAAGGACCCGCACACGCTCTATGTCAGCGTGCAGCACTCCGGCACCGGCAACGACAAGAC CGTCGCGATCACGCGCCAGATCGGCAAGGGGCAGCAGCACCAGGACTGA
Upstream 100 bases:
>100_bases TCATCAAACCATCACAGGGGCGACACACAAGCCGGGAAGAATGCGCGGGCGGTACGCAGATGCCGCCTCATCATTGAAAC CAACCCGGGAGATCCGACCC
Downstream 100 bases:
>100_bases AGATACGCAGCCCGGCAAAAGCCCCCGCCGCGGCGGGGGCTTTTTTGTTTGTGCAAGATTGACGATCTAGTGGAGGTGCG TGGGCCCCGCGTTGTGCAGG
Product: putative phosphatase
Products: NA
Alternate protein names: Phosphatase-Like
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MKYSALVLTLAAAFAAQVHAGSAVEGPMAFTPIAASAYGMDADPNIATEPWLIPEGYVQSIVSDESALDLYLANDWNDMN TANETGKHAGRYLYRTHEVRGANSARVDGGSGGAVSVVDLKTGVAKEVVGRADWEALDGILWTPWQTLLFAEETGAAALP DPAHPAATAGLVYELKLDSHNPAVAERVTVRPLLGALAHEGIETDAEGNVYVIDEDRKGAIYKFVPTSYGDLSAGQLYAL RVRNGAKTGEADWVALDMNQVQIKANVAARAVGATEYCRPEDLERIAGTLYVALTCEDVDDAANTNGRGAVMAIELGDKP RTSYVVSAGKNAPIEDQTTGLTGFKGPDNLANGPDGKLWIVEDNAHSDIWVYDPRSKDANRDGYRDGVHLFASLKDKPAE GSGIYFGKDPHTLYVSVQHSGTGNDKTVAITRQIGKGQQHQD
Sequences:
>Translated_442_residues MKYSALVLTLAAAFAAQVHAGSAVEGPMAFTPIAASAYGMDADPNIATEPWLIPEGYVQSIVSDESALDLYLANDWNDMN TANETGKHAGRYLYRTHEVRGANSARVDGGSGGAVSVVDLKTGVAKEVVGRADWEALDGILWTPWQTLLFAEETGAAALP DPAHPAATAGLVYELKLDSHNPAVAERVTVRPLLGALAHEGIETDAEGNVYVIDEDRKGAIYKFVPTSYGDLSAGQLYAL RVRNGAKTGEADWVALDMNQVQIKANVAARAVGATEYCRPEDLERIAGTLYVALTCEDVDDAANTNGRGAVMAIELGDKP RTSYVVSAGKNAPIEDQTTGLTGFKGPDNLANGPDGKLWIVEDNAHSDIWVYDPRSKDANRDGYRDGVHLFASLKDKPAE GSGIYFGKDPHTLYVSVQHSGTGNDKTVAITRQIGKGQQHQD >Mature_442_residues MKYSALVLTLAAAFAAQVHAGSAVEGPMAFTPIAASAYGMDADPNIATEPWLIPEGYVQSIVSDESALDLYLANDWNDMN TANETGKHAGRYLYRTHEVRGANSARVDGGSGGAVSVVDLKTGVAKEVVGRADWEALDGILWTPWQTLLFAEETGAAALP DPAHPAATAGLVYELKLDSHNPAVAERVTVRPLLGALAHEGIETDAEGNVYVIDEDRKGAIYKFVPTSYGDLSAGQLYAL RVRNGAKTGEADWVALDMNQVQIKANVAARAVGATEYCRPEDLERIAGTLYVALTCEDVDDAANTNGRGAVMAIELGDKP RTSYVVSAGKNAPIEDQTTGLTGFKGPDNLANGPDGKLWIVEDNAHSDIWVYDPRSKDANRDGYRDGVHLFASLKDKPAE GSGIYFGKDPHTLYVSVQHSGTGNDKTVAITRQIGKGQQHQD
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47128; Mature: 47128
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYSALVLTLAAAFAAQVHAGSAVEGPMAFTPIAASAYGMDADPNIATEPWLIPEGYVQS CCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCEECCHHHHHH IVSDESALDLYLANDWNDMNTANETGKHAGRYLYRTHEVRGANSARVDGGSGGAVSVVDL HHCCCCEEEEEEECCCCCCCCCHHHHHHHCCEEEEEEEECCCCCCEECCCCCCEEEEEEE KTGVAKEVVGRADWEALDGILWTPWQTLLFAEETGAAALPDPAHPAATAGLVYELKLDSH CCCHHHHHHCCCCHHHHCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCC NPAVAERVTVRPLLGALAHEGIETDAEGNVYVIDEDRKGAIYKFVPTSYGDLSAGQLYAL CCHHHHHEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCEEEE RVRNGAKTGEADWVALDMNQVQIKANVAARAVGATEYCRPEDLERIAGTLYVALTCEDVD EECCCCCCCCCCEEEEECCEEEEEEEEEEEECCCCCCCCHHHHHHHCCEEEEEEEECCCC DAANTNGRGAVMAIELGDKPRTSYVVSAGKNAPIEDQTTGLTGFKGPDNLANGPDGKLWI CCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE VEDNAHSDIWVYDPRSKDANRDGYRDGVHLFASLKDKPAEGSGIYFGKDPHTLYVSVQHS EECCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEC GTGNDKTVAITRQIGKGQQHQD CCCCCEEEEEEEECCCCCCCCC >Mature Secondary Structure MKYSALVLTLAAAFAAQVHAGSAVEGPMAFTPIAASAYGMDADPNIATEPWLIPEGYVQS CCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCEECCHHHHHH IVSDESALDLYLANDWNDMNTANETGKHAGRYLYRTHEVRGANSARVDGGSGGAVSVVDL HHCCCCEEEEEEECCCCCCCCCHHHHHHHCCEEEEEEEECCCCCCEECCCCCCEEEEEEE KTGVAKEVVGRADWEALDGILWTPWQTLLFAEETGAAALPDPAHPAATAGLVYELKLDSH CCCHHHHHHCCCCHHHHCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCC NPAVAERVTVRPLLGALAHEGIETDAEGNVYVIDEDRKGAIYKFVPTSYGDLSAGQLYAL CCHHHHHEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCEEEE RVRNGAKTGEADWVALDMNQVQIKANVAARAVGATEYCRPEDLERIAGTLYVALTCEDVD EECCCCCCCCCCEEEEECCEEEEEEEEEEEECCCCCCCCHHHHHHHCCEEEEEEEECCCC DAANTNGRGAVMAIELGDKPRTSYVVSAGKNAPIEDQTTGLTGFKGPDNLANGPDGKLWI CCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE VEDNAHSDIWVYDPRSKDANRDGYRDGVHLFASLKDKPAEGSGIYFGKDPHTLYVSVQHS EECCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEC GTGNDKTVAITRQIGKGQQHQD CCCCCEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA