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The map label for this gene is hupE [H]

Identifier: 74317392

GI number: 74317392

Start: 1454356

End: 1454940

Strand: Reverse

Name: hupE [H]

Synonym: Tbd_1374

Alternate gene names: 74317392

Gene position: 1454940-1454356 (Counterclockwise)

Preceding gene: 74317393

Following gene: 74317386

Centisome position: 50.0

GC content: 71.97

Gene sequence:

>585_bases
ATGTACCGAAATACGATCAGCCGCTGTATCGCGCCCGTCCTCGCGCTGCTCTCCGGTAGCGCCGCCGCACACAGCCTCGA
TGCGCCAGCGGGCGGCCTGGCCGCCGGCCTCGCGCATCCTTTCCTCGGCCTCGACCACCTGCTCGCGTTGCTCGCCGTCG
GCCTGTGGGCCACCCAGCATAGCGGGCGCGCGCGCTGGGCGATCCCCGGCGCTTTCGCCGGCGCTTTCGCCGGCGCCACG
GCGGTCGGCACCGCGCTCGCCGCGGCCGGGATCGTGCTTCCGGCTGCCGAAGCGGCGATTGCCGTTTCGGTCGTGATACT
CGGCCTGCTCGTCGCCGCCCGGCACGCGCAGTCATTGCCTGCCGCAATGGCGCTCGCAGGCGCGTTTGCCGTCTTCCACG
GTTTCGCGCACGGCATCGAGATGCAACAGGCCGCTTCGCCTTTAGCCGCAGGTGCCGGCTTCGTGTTGGGCACCGCGCTC
CTGCACGCGGCAGGTTTTCTCGGCGGGGTGGCGGGGCGGCGCGCAGTCCCTTACGCGGGTGCTGCGATCGCGGCGAGCGG
CCTTGCCCTCATCCTCGGGCTGTGA

Upstream 100 bases:

>100_bases
CTTCGACCCCTGCATCGCCTGCGCCGTCCACGTGGTCGATCCGGACGGTGAGGAACTCGTGCAGGTGAAGGTCAAATAAC
CGAATCCCCTGGAGCCACCC

Downstream 100 bases:

>100_bases
GCCGGCGCCGCGCCCGGCCCTAGGAAAACCAGCGCAGAAACGCCGCGGCAGCGAGTGCCGTCACGCCAAGGATGATGAGG
GCCCGAAAGGTCGCGCGTAG

Product: membrane-bound hydrogenase component hupE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MYRNTISRCIAPVLALLSGSAAAHSLDAPAGGLAAGLAHPFLGLDHLLALLAVGLWATQHSGRARWAIPGAFAGAFAGAT
AVGTALAAAGIVLPAAEAAIAVSVVILGLLVAARHAQSLPAAMALAGAFAVFHGFAHGIEMQQAASPLAAGAGFVLGTAL
LHAAGFLGGVAGRRAVPYAGAAIAASGLALILGL

Sequences:

>Translated_194_residues
MYRNTISRCIAPVLALLSGSAAAHSLDAPAGGLAAGLAHPFLGLDHLLALLAVGLWATQHSGRARWAIPGAFAGAFAGAT
AVGTALAAAGIVLPAAEAAIAVSVVILGLLVAARHAQSLPAAMALAGAFAVFHGFAHGIEMQQAASPLAAGAGFVLGTAL
LHAAGFLGGVAGRRAVPYAGAAIAASGLALILGL
>Mature_194_residues
MYRNTISRCIAPVLALLSGSAAAHSLDAPAGGLAAGLAHPFLGLDHLLALLAVGLWATQHSGRARWAIPGAFAGAFAGAT
AVGTALAAAGIVLPAAEAAIAVSVVILGLLVAARHAQSLPAAMALAGAFAVFHGFAHGIEMQQAASPLAAGAGFVLGTAL
LHAAGFLGGVAGRRAVPYAGAAIAASGLALILGL

Specific function: Needed for full hydrogenase activity [H]

COG id: COG2370

COG function: function code O; Hydrogenase/urease accessory protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007038 [H]

Pfam domain/function: PF04955 HupE_UreJ [H]

EC number: NA

Molecular weight: Translated: 18716; Mature: 18716

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRNTISRCIAPVLALLSGSAAAHSLDAPAGGLAAGLAHPFLGLDHLLALLAVGLWATQH
CCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SGRARWAIPGAFAGAFAGATAVGTALAAAGIVLPAAEAAIAVSVVILGLLVAARHAQSLP
CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAMALAGAFAVFHGFAHGIEMQQAASPLAAGAGFVLGTALLHAAGFLGGVAGRRAVPYAG
HHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AAIAASGLALILGL
HHHHHHHHHHHHCC
>Mature Secondary Structure
MYRNTISRCIAPVLALLSGSAAAHSLDAPAGGLAAGLAHPFLGLDHLLALLAVGLWATQH
CCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SGRARWAIPGAFAGAFAGATAVGTALAAAGIVLPAAEAAIAVSVVILGLLVAARHAQSLP
CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAMALAGAFAVFHGFAHGIEMQQAASPLAAGAGFVLGTALLHAAGFLGGVAGRRAVPYAG
HHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AAIAASGLALILGL
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597428 [H]