| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317380
Identifier: 74317380
GI number: 74317380
Start: 1441852
End: 1442271
Strand: Reverse
Name: 74317380
Synonym: Tbd_1362
Alternate gene names: NA
Gene position: 1442271-1441852 (Counterclockwise)
Preceding gene: 74317382
Following gene: 74317379
Centisome position: 49.57
GC content: 68.57
Gene sequence:
>420_bases ATGACCTGGGTCGCCGAGCGCCTGCTTTCGCGGGTCGACAAGGCAGCCGACGGCATCGCCTCGCCGCTCGCGGCGTTGGA GGCGATCTTCATGACCCACATCGATTTCGTCGCGCAGCACCCGGGGGCGCCGCGGATGATATTCGGCGAGCTACAGCGCG GCGGGGACACGGCGCCCAAGCGCATGGTTCAGACCCTCATCCGGCAATACGGCGAACGCCTGCACCGCCTGCTCGAAGCC GGCAAGACGCAGGGCGAACTCGATCCCGCGCTCGACACCGAGGCGGCCGCGACGCTCTTCATCGGCACGATCCAGGGTCT GGTCATGCAGTCCCTGCTTGCCGGTGATGTCGCGGGCATCCGCCGCGACGCGCCGCGGGTGTTCGCCATCTACCGGCGCG GCATCGGGAGAACGCTATGA
Upstream 100 bases:
>100_bases CCAACGACATCACGACCTCGGCGATCGCCAAGCGCATGGGCTGACCCAGGGCGCGCTGTTCCGGCATTTTCCGAGCAAGG ATGCGATCCTCGAGGCGGTC
Downstream 100 bases:
>100_bases AACGGCTCCCTGTGCAACGGCGCACGCTCATGCTCGTCGCCGTGATCCTTCCGCTGCTCGCGCTCTTCGTCTACGTCGGG CTGCGCTCGGGGCCGCTAGC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator Of TetR Family Protein; Regulatory Protein TetR
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MTWVAERLLSRVDKAADGIASPLAALEAIFMTHIDFVAQHPGAPRMIFGELQRGGDTAPKRMVQTLIRQYGERLHRLLEA GKTQGELDPALDTEAAATLFIGTIQGLVMQSLLAGDVAGIRRDAPRVFAIYRRGIGRTL
Sequences:
>Translated_139_residues MTWVAERLLSRVDKAADGIASPLAALEAIFMTHIDFVAQHPGAPRMIFGELQRGGDTAPKRMVQTLIRQYGERLHRLLEA GKTQGELDPALDTEAAATLFIGTIQGLVMQSLLAGDVAGIRRDAPRVFAIYRRGIGRTL >Mature_138_residues TWVAERLLSRVDKAADGIASPLAALEAIFMTHIDFVAQHPGAPRMIFGELQRGGDTAPKRMVQTLIRQYGERLHRLLEAG KTQGELDPALDTEAAATLFIGTIQGLVMQSLLAGDVAGIRRDAPRVFAIYRRGIGRTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15166; Mature: 15035
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWVAERLLSRVDKAADGIASPLAALEAIFMTHIDFVAQHPGAPRMIFGELQRGGDTAPK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHH RMVQTLIRQYGERLHRLLEAGKTQGELDPALDTEAAATLFIGTIQGLVMQSLLAGDVAGI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRDAPRVFAIYRRGIGRTL HHCCHHHHHHHHHHCCCCC >Mature Secondary Structure TWVAERLLSRVDKAADGIASPLAALEAIFMTHIDFVAQHPGAPRMIFGELQRGGDTAPK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHH RMVQTLIRQYGERLHRLLEAGKTQGELDPALDTEAAATLFIGTIQGLVMQSLLAGDVAGI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRDAPRVFAIYRRGIGRTL HHCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA