| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317360
Identifier: 74317360
GI number: 74317360
Start: 1424272
End: 1424688
Strand: Reverse
Name: 74317360
Synonym: Tbd_1342
Alternate gene names: NA
Gene position: 1424688-1424272 (Counterclockwise)
Preceding gene: 74317361
Following gene: 74317356
Centisome position: 48.96
GC content: 55.64
Gene sequence:
>417_bases TTGGCTTCTCTGCTGGGAAGAATGACGGCCGACGACCAGAAACCGATCGTGCCGACGGATTGGCTATTCGCGATACGCAA AGGTTTCTCTTCCCGAGCCTTGGACTCGTTCGGCCAAAATATCAATGCGACGGATGCAGAGCTAGCAAAAATGCTTGGCC TTTCGGTAAGGACATTGGCGCGGCGCCGGCGTATGCTAATTCTCACCCCCAACGAGTCCGACCGGCTATACCGATTAGCA CGGGTGGTCGTACGTGCCGGGGACGTTTTCGATCATCGAGCTAACGGTCTCGTCTGGTTGAGATCCCCAAACGCCGCTCT CGGCGGGCTGACCCCTATGTCAATGCTCGATACGGACATCGGGACGGAGATTGTTAAAGACCTGCTCGGCAGGATCGAAT ACGGCGTATTTTCCTAA
Upstream 100 bases:
>100_bases CAGTAGTGACGAAGGACACATGGTCGCGATCACGAAACGTCAAGGCATAAGAAACAGCCACGCTACGAAGAAGGCCGATA CCCAGGATAGTGCGGCGGAG
Downstream 100 bases:
>100_bases AGCCTACTGGCTTTTTTTTTGCCCACTCTGGGCTTTCTCAAACGGGAAGTTTGAGGCGCCTTCTCCAGAAGTAAGGCACC TACCTTGGCCTGTCCCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MASLLGRMTADDQKPIVPTDWLFAIRKGFSSRALDSFGQNINATDAELAKMLGLSVRTLARRRRMLILTPNESDRLYRLA RVVVRAGDVFDHRANGLVWLRSPNAALGGLTPMSMLDTDIGTEIVKDLLGRIEYGVFS
Sequences:
>Translated_138_residues MASLLGRMTADDQKPIVPTDWLFAIRKGFSSRALDSFGQNINATDAELAKMLGLSVRTLARRRRMLILTPNESDRLYRLA RVVVRAGDVFDHRANGLVWLRSPNAALGGLTPMSMLDTDIGTEIVKDLLGRIEYGVFS >Mature_137_residues ASLLGRMTADDQKPIVPTDWLFAIRKGFSSRALDSFGQNINATDAELAKMLGLSVRTLARRRRMLILTPNESDRLYRLAR VVVRAGDVFDHRANGLVWLRSPNAALGGLTPMSMLDTDIGTEIVKDLLGRIEYGVFS
Specific function: Unknown
COG id: COG5642
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15306; Mature: 15175
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLLGRMTADDQKPIVPTDWLFAIRKGFSSRALDSFGQNINATDAELAKMLGLSVRTLA CCCHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH RRRRMLILTPNESDRLYRLARVVVRAGDVFDHRANGLVWLRSPNAALGGLTPMSMLDTDI HHCCEEEECCCCCHHHHHHHHHHHHHCHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHH GTEIVKDLLGRIEYGVFS HHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASLLGRMTADDQKPIVPTDWLFAIRKGFSSRALDSFGQNINATDAELAKMLGLSVRTLA CCHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH RRRRMLILTPNESDRLYRLARVVVRAGDVFDHRANGLVWLRSPNAALGGLTPMSMLDTDI HHCCEEEECCCCCHHHHHHHHHHHHHCHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHH GTEIVKDLLGRIEYGVFS HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA