| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is ynfA [C]
Identifier: 74317355
GI number: 74317355
Start: 1421023
End: 1421256
Strand: Reverse
Name: ynfA [C]
Synonym: Tbd_1337
Alternate gene names: 74317355
Gene position: 1421256-1421023 (Counterclockwise)
Preceding gene: 74317356
Following gene: 74317354
Centisome position: 48.84
GC content: 63.25
Gene sequence:
>234_bases TTGCTGTTCGCCATCACCGCGGCGGCGGAAATCGTCGGCTGCTACCTGCCGTGGCTGGTGCTTAGGCAGGACAAGCTCGC GTGGTTGCTCACACCACATCCGGCTGCCACGGGGCTCCGCCTATATCACGGTGGCGCTTGCGAAGCTCACGGGCGGTGGG ATGCCTTAATCGGCGTGCGCTTGCTTGACCCGGCCGCGCACGTTAAAGTCAAATCATGCGTCGACTTCGGGTAG
Upstream 100 bases:
>100_bases ACTGGCCGACCTGATCCAGCGCTGCTGCGCTATTAGCGGAGATGTTCGGTGTCCGCTCATTGCATCGCTGAAAGGGAGCT GACGACGGATCAAAGTCTCC
Downstream 100 bases:
>100_bases TTCTCTTCCTGCTGCTTTCTCTTGCGGTTCCGCTGCAGGGATATGCGCACTTTGCGCAGCCGCTGGTACCCTGCCCCATG GAGGGCTCCGGCATGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MLFAITAAAEIVGCYLPWLVLRQDKLAWLLTPHPAATGLRLYHGGACEAHGRWDALIGVRLLDPAAHVKVKSCVDFG
Sequences:
>Translated_77_residues MLFAITAAAEIVGCYLPWLVLRQDKLAWLLTPHPAATGLRLYHGGACEAHGRWDALIGVRLLDPAAHVKVKSCVDFG >Mature_77_residues MLFAITAAAEIVGCYLPWLVLRQDKLAWLLTPHPAATGLRLYHGGACEAHGRWDALIGVRLLDPAAHVKVKSCVDFG
Specific function: Unknown
COG id: COG1742
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8366; Mature: 8366
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFAITAAAEIVGCYLPWLVLRQDKLAWLLTPHPAATGLRLYHGGACEAHGRWDALIGVR CEEEEHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEE LLDPAAHVKVKSCVDFG EECCCCCEEEEEEECCC >Mature Secondary Structure MLFAITAAAEIVGCYLPWLVLRQDKLAWLLTPHPAATGLRLYHGGACEAHGRWDALIGVR CEEEEHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEE LLDPAAHVKVKSCVDFG EECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA