Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is ynfA [C]

Identifier: 74317355

GI number: 74317355

Start: 1421023

End: 1421256

Strand: Reverse

Name: ynfA [C]

Synonym: Tbd_1337

Alternate gene names: 74317355

Gene position: 1421256-1421023 (Counterclockwise)

Preceding gene: 74317356

Following gene: 74317354

Centisome position: 48.84

GC content: 63.25

Gene sequence:

>234_bases
TTGCTGTTCGCCATCACCGCGGCGGCGGAAATCGTCGGCTGCTACCTGCCGTGGCTGGTGCTTAGGCAGGACAAGCTCGC
GTGGTTGCTCACACCACATCCGGCTGCCACGGGGCTCCGCCTATATCACGGTGGCGCTTGCGAAGCTCACGGGCGGTGGG
ATGCCTTAATCGGCGTGCGCTTGCTTGACCCGGCCGCGCACGTTAAAGTCAAATCATGCGTCGACTTCGGGTAG

Upstream 100 bases:

>100_bases
ACTGGCCGACCTGATCCAGCGCTGCTGCGCTATTAGCGGAGATGTTCGGTGTCCGCTCATTGCATCGCTGAAAGGGAGCT
GACGACGGATCAAAGTCTCC

Downstream 100 bases:

>100_bases
TTCTCTTCCTGCTGCTTTCTCTTGCGGTTCCGCTGCAGGGATATGCGCACTTTGCGCAGCCGCTGGTACCCTGCCCCATG
GAGGGCTCCGGCATGATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MLFAITAAAEIVGCYLPWLVLRQDKLAWLLTPHPAATGLRLYHGGACEAHGRWDALIGVRLLDPAAHVKVKSCVDFG

Sequences:

>Translated_77_residues
MLFAITAAAEIVGCYLPWLVLRQDKLAWLLTPHPAATGLRLYHGGACEAHGRWDALIGVRLLDPAAHVKVKSCVDFG
>Mature_77_residues
MLFAITAAAEIVGCYLPWLVLRQDKLAWLLTPHPAATGLRLYHGGACEAHGRWDALIGVRLLDPAAHVKVKSCVDFG

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8366; Mature: 8366

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFAITAAAEIVGCYLPWLVLRQDKLAWLLTPHPAATGLRLYHGGACEAHGRWDALIGVR
CEEEEHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEE
LLDPAAHVKVKSCVDFG
EECCCCCEEEEEEECCC
>Mature Secondary Structure
MLFAITAAAEIVGCYLPWLVLRQDKLAWLLTPHPAATGLRLYHGGACEAHGRWDALIGVR
CEEEEHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEE
LLDPAAHVKVKSCVDFG
EECCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA