Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is ylcC [C]

Identifier: 74317344

GI number: 74317344

Start: 1405824

End: 1406228

Strand: Direct

Name: ylcC [C]

Synonym: Tbd_1326

Alternate gene names: 74317344

Gene position: 1405824-1406228 (Clockwise)

Preceding gene: 74317343

Following gene: 74317357

Centisome position: 48.31

GC content: 57.28

Gene sequence:

>405_bases
ATGGAAAAGACTTTTCCGCTTCTGCTCAACAACGCAATCGAAAGGAACGCAATCATGAAAGGCGTATTTTTGTTAGGGCT
TTCCAGCATGGTCGTTCTAGGGATGGGGCTCGCTCATGCCGCGCCGGCCGGCTCGGCCGAACCGCTCAGGGTCGCGGCGG
CCGATGCGAAACAGGCGGCGGTGTCGGGAACCGGCGTCGTCGAGCAGGTCAAGGCCGAACAGAGCAAGATCAAGATCAAC
CATGAGCCGATCCCGGCACTGGATTGGCCCTCGATGTCCATGTACTTCCGCGTCAAGGACAAGGCTGTTCTGGAAGGCAT
AGCCACCGGGGACAAGGTGCAGTTCGATTTGGAGAAAGGCAAGACGGGTTTGGAAATCACCCGAATCGAGAAAGTGTCCC
AGTGA

Upstream 100 bases:

>100_bases
GCGGGATGCGGGCGAGGACGTCTCGGACACGCGGCTGGTCGCAGGCCTGCGCTTCTGGTTCTGACCCATTTTTTTTGGAT
CGACTTCGATGGAGGAACGT

Downstream 100 bases:

>100_bases
CGCTGCCGGCGAGAGTGAACTCCGCGTCCAATCCCCGATGCGTTCCACGTCATTTACCTCTGCGCCAATAGTAATTGCTG
CGCGGTGAACTCAAGGTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MEKTFPLLLNNAIERNAIMKGVFLLGLSSMVVLGMGLAHAAPAGSAEPLRVAAADAKQAAVSGTGVVEQVKAEQSKIKIN
HEPIPALDWPSMSMYFRVKDKAVLEGIATGDKVQFDLEKGKTGLEITRIEKVSQ

Sequences:

>Translated_134_residues
MEKTFPLLLNNAIERNAIMKGVFLLGLSSMVVLGMGLAHAAPAGSAEPLRVAAADAKQAAVSGTGVVEQVKAEQSKIKIN
HEPIPALDWPSMSMYFRVKDKAVLEGIATGDKVQFDLEKGKTGLEITRIEKVSQ
>Mature_134_residues
MEKTFPLLLNNAIERNAIMKGVFLLGLSSMVVLGMGLAHAAPAGSAEPLRVAAADAKQAAVSGTGVVEQVKAEQSKIKIN
HEPIPALDWPSMSMYFRVKDKAVLEGIATGDKVQFDLEKGKTGLEITRIEKVSQ

Specific function: Unknown

COG id: COG5569

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786786, Length=81, Percent_Identity=38.2716049382716, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14331; Mature: 14331

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTFPLLLNNAIERNAIMKGVFLLGLSSMVVLGMGLAHAAPAGSAEPLRVAAADAKQAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCEEEEECCCHHHH
VSGTGVVEQVKAEQSKIKINHEPIPALDWPSMSMYFRVKDKAVLEGIATGDKVQFDLEKG
CCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCEEEEECCCC
KTGLEITRIEKVSQ
CCCCEEEEEECCCC
>Mature Secondary Structure
MEKTFPLLLNNAIERNAIMKGVFLLGLSSMVVLGMGLAHAAPAGSAEPLRVAAADAKQAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCEEEEECCCHHHH
VSGTGVVEQVKAEQSKIKINHEPIPALDWPSMSMYFRVKDKAVLEGIATGDKVQFDLEKG
CCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCEEEEECCCC
KTGLEITRIEKVSQ
CCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA