| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317339
Identifier: 74317339
GI number: 74317339
Start: 1401301
End: 1401735
Strand: Direct
Name: 74317339
Synonym: Tbd_1321
Alternate gene names: NA
Gene position: 1401301-1401735 (Clockwise)
Preceding gene: 74317338
Following gene: 74317340
Centisome position: 48.16
GC content: 61.15
Gene sequence:
>435_bases GTGGTCCGCTCCCTGAAGGCCGTTCCTTCCCCCGAACATCTGGCATTCTCGCCGGATGAAAAACTGCTCTACGTTGCCAA CGCCCGAGCCGGCACAGTTTCGGTCGTCGGGGTGAGGGAAGGCGAAGTCCGAACGACCTACACGATCGGCAAACGGCTGC ACGGGCTGGATATCGGCGACGACGGCAAGACGCTTTTTATCAGCAGTCAGTCGGATGACAGAGTGGTGGCGCTGGATACC GAAACCGGCGAACGGCGCGTCCTTCCGCTTTCACCGGAGCCGTATCACCTCGACAGGATTCCAGGCACCGGGAAGATCTA CGTTTCCAGCAGCAAGGCGCCAAAGATCTGGGTGGTGGACCAGGACGCGGTCACCGTCGCGGACGAGATCGAACTGCCCG CGGGCGAAGGCCATCAGATTGCGGTGGTCAAATGA
Upstream 100 bases:
>100_bases CGCCCCCAATTACACCCTGATCACGAAGGACGGAAAGCATGCCTACGTAAGCAACAGCGGCGACGGAACCATCAGCGAGA TCGACCTCGGTTCTTGAACC
Downstream 100 bases:
>100_bases GCGGCTGCGCACGCGTGGAAAGGAGATTCGAATGATGAAACGCGTCGTCGTCGCCATGCTCCTGCTTGCCGGGCTCGGGC CGCTTGGAAGTCTCGTCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MVRSLKAVPSPEHLAFSPDEKLLYVANARAGTVSVVGVREGEVRTTYTIGKRLHGLDIGDDGKTLFISSQSDDRVVALDT ETGERRVLPLSPEPYHLDRIPGTGKIYVSSSKAPKIWVVDQDAVTVADEIELPAGEGHQIAVVK
Sequences:
>Translated_144_residues MVRSLKAVPSPEHLAFSPDEKLLYVANARAGTVSVVGVREGEVRTTYTIGKRLHGLDIGDDGKTLFISSQSDDRVVALDT ETGERRVLPLSPEPYHLDRIPGTGKIYVSSSKAPKIWVVDQDAVTVADEIELPAGEGHQIAVVK >Mature_144_residues MVRSLKAVPSPEHLAFSPDEKLLYVANARAGTVSVVGVREGEVRTTYTIGKRLHGLDIGDDGKTLFISSQSDDRVVALDT ETGERRVLPLSPEPYHLDRIPGTGKIYVSSSKAPKIWVVDQDAVTVADEIELPAGEGHQIAVVK
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15574; Mature: 15574
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRSLKAVPSPEHLAFSPDEKLLYVANARAGTVSVVGVREGEVRTTYTIGKRLHGLDIGD CCCCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEEEECCCCEEEEEEECCEEECCEECC DGKTLFISSQSDDRVVALDTETGERRVLPLSPEPYHLDRIPGTGKIYVSSSKAPKIWVVD CCCEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCCCEEEEECCCCCEEEEEE QDAVTVADEIELPAGEGHQIAVVK CCCEEEEEEEECCCCCCCEEEEEC >Mature Secondary Structure MVRSLKAVPSPEHLAFSPDEKLLYVANARAGTVSVVGVREGEVRTTYTIGKRLHGLDIGD CCCCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEEEECCCCEEEEEEECCEEECCEECC DGKTLFISSQSDDRVVALDTETGERRVLPLSPEPYHLDRIPGTGKIYVSSSKAPKIWVVD CCCEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCCCEEEEECCCCCEEEEEE QDAVTVADEIELPAGEGHQIAVVK CCCEEEEEEEECCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA