| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317331
Identifier: 74317331
GI number: 74317331
Start: 1393951
End: 1394586
Strand: Direct
Name: 74317331
Synonym: Tbd_1313
Alternate gene names: NA
Gene position: 1393951-1394586 (Clockwise)
Preceding gene: 74317330
Following gene: 74317332
Centisome position: 47.91
GC content: 60.69
Gene sequence:
>636_bases ATGCGCATCTCTCGGGAGACCGCGATGCAACCCTGTTCCTTGGCCTTGAATTCCCTGCGTGCACTCTGGTTGATGACGCT ACTGATATTCGCCGGAGCGGCTGTTGCAGCCGGTCCCGCGGCCGAAAAGAAGGCGGCGAAATTTGAAATCGACTACATGA CCGGAATGATCAGCCATCACCAGATGGCCGTGCACATGGGAACGATGTGCGTGCAGAAGGCCGAGCACGAGGAATTGCGC GCGATGTGCGACCAGATCATCGCGGCGCAGACCGCGGAAATCGCGACGCTGATGGGCTGGCTGCAAGCCTGGTATGGCAG CGGTGTGGAACCGAAGATGTCGGGCAAGGATCAGCGCGAGATGGAGAAGCTCGAGGCGCTGAGCGGCGCCGAATTCGAGA TCGAGTTCATGAAATCCATGATCCGGCATCACTTCACAGCGATCGTCGTGAGCAGCGAATGCCTGCTGGACGCCGACCAC CCGGCGCTCATCGCCATGTGTCAGGACATCATCACCGCGCAAGCGGCCGAGATTCGTCAGCTGCGCAACTGGCTATGCGA GTGGTACGGCATCTGCAGCTACCGCGCGCGCAGCGAGGAAATCCGCGAAGAGACGCGTACGCGCCGGCCTGAGTAA
Upstream 100 bases:
>100_bases GGCGCCGCTCGGTTTTCCCTTGTACTCCGGCAGGCGCCCTCTATAGTCGCTTAAGCGCCTGCTCGGGGGCGCCGTGACCT CACCCCATACCCTGCGCCGT
Downstream 100 bases:
>100_bases GCGCGCTCGGCCGCAGGGCACGGCGACCAGGGCGCGGTGGGCGTGGGAGAAAAGCGAGGCGCGCTTTCACGCATGGCAGG TACGCGAAAATCGGCCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MRISRETAMQPCSLALNSLRALWLMTLLIFAGAAVAAGPAAEKKAAKFEIDYMTGMISHHQMAVHMGTMCVQKAEHEELR AMCDQIIAAQTAEIATLMGWLQAWYGSGVEPKMSGKDQREMEKLEALSGAEFEIEFMKSMIRHHFTAIVVSSECLLDADH PALIAMCQDIITAQAAEIRQLRNWLCEWYGICSYRARSEEIREETRTRRPE
Sequences:
>Translated_211_residues MRISRETAMQPCSLALNSLRALWLMTLLIFAGAAVAAGPAAEKKAAKFEIDYMTGMISHHQMAVHMGTMCVQKAEHEELR AMCDQIIAAQTAEIATLMGWLQAWYGSGVEPKMSGKDQREMEKLEALSGAEFEIEFMKSMIRHHFTAIVVSSECLLDADH PALIAMCQDIITAQAAEIRQLRNWLCEWYGICSYRARSEEIREETRTRRPE >Mature_211_residues MRISRETAMQPCSLALNSLRALWLMTLLIFAGAAVAAGPAAEKKAAKFEIDYMTGMISHHQMAVHMGTMCVQKAEHEELR AMCDQIIAAQTAEIATLMGWLQAWYGSGVEPKMSGKDQREMEKLEALSGAEFEIEFMKSMIRHHFTAIVVSSECLLDADH PALIAMCQDIITAQAAEIRQLRNWLCEWYGICSYRARSEEIREETRTRRPE
Specific function: Unknown
COG id: COG3544
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23814; Mature: 23814
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 10.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISRETAMQPCSLALNSLRALWLMTLLIFAGAAVAAGPAAEKKAAKFEIDYMTGMISHH CCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QMAVHMGTMCVQKAEHEELRAMCDQIIAAQTAEIATLMGWLQAWYGSGVEPKMSGKDQRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH MEKLEALSGAEFEIEFMKSMIRHHFTAIVVSSECLLDADHPALIAMCQDIITAQAAEIRQ HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LRNWLCEWYGICSYRARSEEIREETRTRRPE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRISRETAMQPCSLALNSLRALWLMTLLIFAGAAVAAGPAAEKKAAKFEIDYMTGMISHH CCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QMAVHMGTMCVQKAEHEELRAMCDQIIAAQTAEIATLMGWLQAWYGSGVEPKMSGKDQRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH MEKLEALSGAEFEIEFMKSMIRHHFTAIVVSSECLLDADHPALIAMCQDIITAQAAEIRQ HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LRNWLCEWYGICSYRARSEEIREETRTRRPE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA