| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317328
Identifier: 74317328
GI number: 74317328
Start: 1389412
End: 1389921
Strand: Reverse
Name: 74317328
Synonym: Tbd_1310
Alternate gene names: NA
Gene position: 1389921-1389412 (Counterclockwise)
Preceding gene: 74317336
Following gene: 74317323
Centisome position: 47.77
GC content: 59.22
Gene sequence:
>510_bases ATGAAATCATTTATTTTCAATAGGTTGTCATGCAAACATGACTATTCATATTACGAACTGACCGGGGCTGTCGTCGGGGA AGAGCGACAGGTCCCGGGGCGCAAATTGCAGATCCTTGATCGGAAAGGCAAAAATGCTGTCGCAAGTCGGCGACAACCGG CTCCGCAAATTGCAACGGGTGCCTTTGCGCTATGCCGGTGCAACTTTTTTACGATCAGGCGACAACCACGCGATGCGCCA AAACGCGTGAGCAGGTTGCTCTATGACGTTGATGTTATGGGACTTCGAAAGGATCGCGCCTGTCAGCGGCCCGCATGGCG CCGCTGGGTCAAGCGCGGCCGGGAGTTCATGGAAAGCGCCCTCGTGAGAGAACTGCTGCGACCCGCTCGTGCGAAGAATT CGATGAGGAGCGTTCCGGCCGAGCAAGCCGGGGCGACCCTGGCCGCCCTCCCGCGGGTGCCGCAGCCGCTCCGTGGCCCC GTACGCCCCGAAACAGAAACGGCCGCATGA
Upstream 100 bases:
>100_bases AGCACAGGGAAGATCGACTCGGTACCGTGGTATCGGGTAATTCGCATTCGATGGGGCCGTTAAGGAGACACCGCCCCTAT GCAACCCCTATGCCAACCCA
Downstream 100 bases:
>100_bases GCGGCCGGGCGAAAACGCTGGGAGCCCCGGGTCGGGACCCGGGCGGCGTATCAGCGAGTCAGGCGGACTTCTGCGCCTTG TACTCGAGCCATTTCTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKSFIFNRLSCKHDYSYYELTGAVVGEERQVPGRKLQILDRKGKNAVASRRQPAPQIATGAFALCRCNFFTIRRQPRDAP KRVSRLLYDVDVMGLRKDRACQRPAWRRWVKRGREFMESALVRELLRPARAKNSMRSVPAEQAGATLAALPRVPQPLRGP VRPETETAA
Sequences:
>Translated_169_residues MKSFIFNRLSCKHDYSYYELTGAVVGEERQVPGRKLQILDRKGKNAVASRRQPAPQIATGAFALCRCNFFTIRRQPRDAP KRVSRLLYDVDVMGLRKDRACQRPAWRRWVKRGREFMESALVRELLRPARAKNSMRSVPAEQAGATLAALPRVPQPLRGP VRPETETAA >Mature_169_residues MKSFIFNRLSCKHDYSYYELTGAVVGEERQVPGRKLQILDRKGKNAVASRRQPAPQIATGAFALCRCNFFTIRRQPRDAP KRVSRLLYDVDVMGLRKDRACQRPAWRRWVKRGREFMESALVRELLRPARAKNSMRSVPAEQAGATLAALPRVPQPLRGP VRPETETAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19277; Mature: 19277
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFIFNRLSCKHDYSYYELTGAVVGEERQVPGRKLQILDRKGKNAVASRRQPAPQIATG CCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHCCCCCCCHHHH AFALCRCNFFTIRRQPRDAPKRVSRLLYDVDVMGLRKDRACQRPAWRRWVKRGREFMESA HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHH LVRELLRPARAKNSMRSVPAEQAGATLAALPRVPQPLRGPVRPETETAA HHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKSFIFNRLSCKHDYSYYELTGAVVGEERQVPGRKLQILDRKGKNAVASRRQPAPQIATG CCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHCCCCCCCHHHH AFALCRCNFFTIRRQPRDAPKRVSRLLYDVDVMGLRKDRACQRPAWRRWVKRGREFMESA HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHH LVRELLRPARAKNSMRSVPAEQAGATLAALPRVPQPLRGPVRPETETAA HHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA