Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317328

Identifier: 74317328

GI number: 74317328

Start: 1389412

End: 1389921

Strand: Reverse

Name: 74317328

Synonym: Tbd_1310

Alternate gene names: NA

Gene position: 1389921-1389412 (Counterclockwise)

Preceding gene: 74317336

Following gene: 74317323

Centisome position: 47.77

GC content: 59.22

Gene sequence:

>510_bases
ATGAAATCATTTATTTTCAATAGGTTGTCATGCAAACATGACTATTCATATTACGAACTGACCGGGGCTGTCGTCGGGGA
AGAGCGACAGGTCCCGGGGCGCAAATTGCAGATCCTTGATCGGAAAGGCAAAAATGCTGTCGCAAGTCGGCGACAACCGG
CTCCGCAAATTGCAACGGGTGCCTTTGCGCTATGCCGGTGCAACTTTTTTACGATCAGGCGACAACCACGCGATGCGCCA
AAACGCGTGAGCAGGTTGCTCTATGACGTTGATGTTATGGGACTTCGAAAGGATCGCGCCTGTCAGCGGCCCGCATGGCG
CCGCTGGGTCAAGCGCGGCCGGGAGTTCATGGAAAGCGCCCTCGTGAGAGAACTGCTGCGACCCGCTCGTGCGAAGAATT
CGATGAGGAGCGTTCCGGCCGAGCAAGCCGGGGCGACCCTGGCCGCCCTCCCGCGGGTGCCGCAGCCGCTCCGTGGCCCC
GTACGCCCCGAAACAGAAACGGCCGCATGA

Upstream 100 bases:

>100_bases
AGCACAGGGAAGATCGACTCGGTACCGTGGTATCGGGTAATTCGCATTCGATGGGGCCGTTAAGGAGACACCGCCCCTAT
GCAACCCCTATGCCAACCCA

Downstream 100 bases:

>100_bases
GCGGCCGGGCGAAAACGCTGGGAGCCCCGGGTCGGGACCCGGGCGGCGTATCAGCGAGTCAGGCGGACTTCTGCGCCTTG
TACTCGAGCCATTTCTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKSFIFNRLSCKHDYSYYELTGAVVGEERQVPGRKLQILDRKGKNAVASRRQPAPQIATGAFALCRCNFFTIRRQPRDAP
KRVSRLLYDVDVMGLRKDRACQRPAWRRWVKRGREFMESALVRELLRPARAKNSMRSVPAEQAGATLAALPRVPQPLRGP
VRPETETAA

Sequences:

>Translated_169_residues
MKSFIFNRLSCKHDYSYYELTGAVVGEERQVPGRKLQILDRKGKNAVASRRQPAPQIATGAFALCRCNFFTIRRQPRDAP
KRVSRLLYDVDVMGLRKDRACQRPAWRRWVKRGREFMESALVRELLRPARAKNSMRSVPAEQAGATLAALPRVPQPLRGP
VRPETETAA
>Mature_169_residues
MKSFIFNRLSCKHDYSYYELTGAVVGEERQVPGRKLQILDRKGKNAVASRRQPAPQIATGAFALCRCNFFTIRRQPRDAP
KRVSRLLYDVDVMGLRKDRACQRPAWRRWVKRGREFMESALVRELLRPARAKNSMRSVPAEQAGATLAALPRVPQPLRGP
VRPETETAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19277; Mature: 19277

Theoretical pI: Translated: 11.65; Mature: 11.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFIFNRLSCKHDYSYYELTGAVVGEERQVPGRKLQILDRKGKNAVASRRQPAPQIATG
CCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHCCCCCCCHHHH
AFALCRCNFFTIRRQPRDAPKRVSRLLYDVDVMGLRKDRACQRPAWRRWVKRGREFMESA
HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHH
LVRELLRPARAKNSMRSVPAEQAGATLAALPRVPQPLRGPVRPETETAA
HHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKSFIFNRLSCKHDYSYYELTGAVVGEERQVPGRKLQILDRKGKNAVASRRQPAPQIATG
CCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHCCCCCCCHHHH
AFALCRCNFFTIRRQPRDAPKRVSRLLYDVDVMGLRKDRACQRPAWRRWVKRGREFMESA
HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHH
LVRELLRPARAKNSMRSVPAEQAGATLAALPRVPQPLRGPVRPETETAA
HHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA