| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317326
Identifier: 74317326
GI number: 74317326
Start: 1387265
End: 1387939
Strand: Direct
Name: 74317326
Synonym: Tbd_1308
Alternate gene names: NA
Gene position: 1387265-1387939 (Clockwise)
Preceding gene: 74317325
Following gene: 74317327
Centisome position: 47.68
GC content: 65.78
Gene sequence:
>675_bases GTGTCCGATAAGAGCCCTGCGATGTCGCACGAGACCGCTTCCCCGCTGGTTCTGACGATCGGCCATTCGACGCATCCGAT CGACGTTTTCATCGGGCTGCTGCAGGCACACGGCGCGGCTTCGCTGGTCGATGTGCGCACGGTGCCGCGCTCGCGGCACA ACCCGCAATTCAACACGGAGGCCCTGGCGCAGTCACTCGCCGATGCCGGTCTCGGCTACGTGCATGCGCCCGGTCTCGGC GGCCTGCGGCGCGCCAGGCCCGATTCGCCCAACGCCGGATGGCGCAACGCCTCGTTTCGCGGCTATGCCGACTACATGCA GACAGCCGACTTCGCGCGCAGCCTCGACGCGTTGATCGCCCTCGCGCAGACGCGGCGAATCGTCCTGATGTGCGCCGAGG CCGTACCCTGGCGCTGCCATCGTTCGCTCATCGCGGATGCACTCGTCCTCCGCGGCTTCCGCGTCGAACACATCCTGAGC GCGACGCGCCGTCAGCTTCACGCGCTCACACCATTCGCGCGGGTGAGCGGCGGCACGCTCACCTATCCACCCGAGGCGGG ATCCGCGCCGGGGCAAGCGACCGTCGCGACGGACGGATGTTGCCCCAACGAGGGTGGAACCACTCATATCGAAAATACCG ATGCAAAAGGCCAAAAAAGATCGTTTGTTAAATAG
Upstream 100 bases:
>100_bases AGCGAGGGCTCGCAAAGTGCGCGGGCCGCGCGCGCCGCTGGATTCCGCGCCCGCGCGAGGTTTGGGAGATCGTCCGACCA CCCCGGGAAAGGCCGCCTGA
Downstream 100 bases:
>100_bases TTATTAAAAAACTATTTTTCGTCAGGTGCGAACGCCCAATGGGCGGCGCGGCCCGCAGGCTCGAAGGCTCGAGCCTCAAA ACATAACGAACCTAACGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSDKSPAMSHETASPLVLTIGHSTHPIDVFIGLLQAHGAASLVDVRTVPRSRHNPQFNTEALAQSLADAGLGYVHAPGLG GLRRARPDSPNAGWRNASFRGYADYMQTADFARSLDALIALAQTRRIVLMCAEAVPWRCHRSLIADALVLRGFRVEHILS ATRRQLHALTPFARVSGGTLTYPPEAGSAPGQATVATDGCCPNEGGTTHIENTDAKGQKRSFVK
Sequences:
>Translated_224_residues MSDKSPAMSHETASPLVLTIGHSTHPIDVFIGLLQAHGAASLVDVRTVPRSRHNPQFNTEALAQSLADAGLGYVHAPGLG GLRRARPDSPNAGWRNASFRGYADYMQTADFARSLDALIALAQTRRIVLMCAEAVPWRCHRSLIADALVLRGFRVEHILS ATRRQLHALTPFARVSGGTLTYPPEAGSAPGQATVATDGCCPNEGGTTHIENTDAKGQKRSFVK >Mature_223_residues SDKSPAMSHETASPLVLTIGHSTHPIDVFIGLLQAHGAASLVDVRTVPRSRHNPQFNTEALAQSLADAGLGYVHAPGLGG LRRARPDSPNAGWRNASFRGYADYMQTADFARSLDALIALAQTRRIVLMCAEAVPWRCHRSLIADALVLRGFRVEHILSA TRRQLHALTPFARVSGGTLTYPPEAGSAPGQATVATDGCCPNEGGTTHIENTDAKGQKRSFVK
Specific function: Unknown
COG id: COG5483
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23970; Mature: 23839
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKSPAMSHETASPLVLTIGHSTHPIDVFIGLLQAHGAASLVDVRTVPRSRHNPQFNTE CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHH ALAQSLADAGLGYVHAPGLGGLRRARPDSPNAGWRNASFRGYADYMQTADFARSLDALIA HHHHHHHHHCCCEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LAQTRRIVLMCAEAVPWRCHRSLIADALVLRGFRVEHILSATRRQLHALTPFARVSGGTL HHHHHHEEEHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCEE TYPPEAGSAPGQATVATDGCCPNEGGTTHIENTDAKGQKRSFVK ECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDKSPAMSHETASPLVLTIGHSTHPIDVFIGLLQAHGAASLVDVRTVPRSRHNPQFNTE CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHH ALAQSLADAGLGYVHAPGLGGLRRARPDSPNAGWRNASFRGYADYMQTADFARSLDALIA HHHHHHHHHCCCEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LAQTRRIVLMCAEAVPWRCHRSLIADALVLRGFRVEHILSATRRQLHALTPFARVSGGTL HHHHHHEEEHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCEE TYPPEAGSAPGQATVATDGCCPNEGGTTHIENTDAKGQKRSFVK ECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA