| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317323
Identifier: 74317323
GI number: 74317323
Start: 1383467
End: 1384492
Strand: Reverse
Name: 74317323
Synonym: Tbd_1305
Alternate gene names: NA
Gene position: 1384492-1383467 (Counterclockwise)
Preceding gene: 74317328
Following gene: 74317322
Centisome position: 47.58
GC content: 73.49
Gene sequence:
>1026_bases ATGTCCCGTCCCGCGGCGTGGTTCGCCGTCCGTGCCTCCGTGTGCTTTTTCGCGATCCTGCTGGGCGTCGCTGGCCTTGC CGCCTGCGCGACCCCGGTCGAGCAGCCCTGCCGCGACGACGCGGCGGCCCCGCGCCTCGAGGCCGATCGCGTCATCGCCG CAGACGGCGCAGTGCTGCCACTCAGCGTCTGGCGCCCGCCGGGCGAGGTGCGGGCGGTCGTTCTTGCCCTGCACGGCTTC AACGACTACGGGCACGCCTTCGCCGACGTCGGACCGTTTCTCGCGCGTCGCGGGATCGTGACCTACGCCTACGACCAGCG CGGGTTCGGCCGCACCGCCGGCCGCGGCCTGTGGCCCTGTCGGGGACGGCTCGTCGACGACGCGCGCAGCGTCGCCGCCT TGCTGCGCGAGACCTACCCCGGGCGTCCGCTCTATCTGGTCGGCGAGAGCATGGGCGGCGCGGTGGCGATGCGCCTGCTC GCCGACACGCCGGCCGCCGCCGACGGCGCGGTCCTCGTCGCGGCGGCCGTGTGGAGCCGGGCGACCATGAATCCGCTGCA GCGCGCGGCCCTGTGGCTCGTCGCGCATACCCTCCCCGACCTGCAGTTGTCGGGTCGCGGGCTCGGCATCAGGGCGTCGG ACAACGACGCGATGCTGCATGCCCTGCGTGAGGATCCGCTGGTTTTGAAGAAGGCGCGCGCCGACACGCTCTGGGGGCTC GCCGACCTCAGGGACGGCGCGTTCGCGGCCGCTCCCCGCCTGACGACGCCCACGCTCGTCCTCTACGGCGAGCGCGACGA GATCATCCCGCGTCGCCCGTTCTGCCGCACGCTCGCCACCCTGCCGCCCGCAGCACGCGTCGCCGTCTACCCGGACGGCT ACCACATGCTGACCCGCGATCTCGGCGCATCGGCCGTGCTCGCAGACCTGGCCGCATGGCTCGGCGACCGCGATGCGCCC CTGCCCTCGGGCCGCGAGTTCGAGCGGCAACGCGAACGCGCGCTGAACAACCTGTGTGCTTCCTGA
Upstream 100 bases:
>100_bases TTATACAGTAGACCGCCGCTGGCAAGCCGCCCCGCGTGACGGGCCTGGGTCGCCAGGGGTCGCCGCATACTATGTTTCAG GCACGAGTCGAGGAGATGCC
Downstream 100 bases:
>100_bases AACGTGCCGCCGGTGGACGGCGCCCGGCGTCAGGAGCCGTCCGGATATCGCTCCGTCCGCGGAAAGACGCGCGCCGACTC GACTTGCAAGCTCTCCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Lysophospholipase; Alpha/Beta Hydrolase Fold; Acylglycerol Lipase; Esterase/Lipase; Alpha/Beta Hydrolase; Monoacylglycerol Lipase; Monoglyceride Lipase; Alpha/Beta Fold Family Hydrolase; Lipase; Hydrolase; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase-Like Protein
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSRPAAWFAVRASVCFFAILLGVAGLAACATPVEQPCRDDAAAPRLEADRVIAADGAVLPLSVWRPPGEVRAVVLALHGF NDYGHAFADVGPFLARRGIVTYAYDQRGFGRTAGRGLWPCRGRLVDDARSVAALLRETYPGRPLYLVGESMGGAVAMRLL ADTPAAADGAVLVAAAVWSRATMNPLQRAALWLVAHTLPDLQLSGRGLGIRASDNDAMLHALREDPLVLKKARADTLWGL ADLRDGAFAAAPRLTTPTLVLYGERDEIIPRRPFCRTLATLPPAARVAVYPDGYHMLTRDLGASAVLADLAAWLGDRDAP LPSGREFERQRERALNNLCAS
Sequences:
>Translated_341_residues MSRPAAWFAVRASVCFFAILLGVAGLAACATPVEQPCRDDAAAPRLEADRVIAADGAVLPLSVWRPPGEVRAVVLALHGF NDYGHAFADVGPFLARRGIVTYAYDQRGFGRTAGRGLWPCRGRLVDDARSVAALLRETYPGRPLYLVGESMGGAVAMRLL ADTPAAADGAVLVAAAVWSRATMNPLQRAALWLVAHTLPDLQLSGRGLGIRASDNDAMLHALREDPLVLKKARADTLWGL ADLRDGAFAAAPRLTTPTLVLYGERDEIIPRRPFCRTLATLPPAARVAVYPDGYHMLTRDLGASAVLADLAAWLGDRDAP LPSGREFERQRERALNNLCAS >Mature_340_residues SRPAAWFAVRASVCFFAILLGVAGLAACATPVEQPCRDDAAAPRLEADRVIAADGAVLPLSVWRPPGEVRAVVLALHGFN DYGHAFADVGPFLARRGIVTYAYDQRGFGRTAGRGLWPCRGRLVDDARSVAALLRETYPGRPLYLVGESMGGAVAMRLLA DTPAAADGAVLVAAAVWSRATMNPLQRAALWLVAHTLPDLQLSGRGLGIRASDNDAMLHALREDPLVLKKARADTLWGLA DLRDGAFAAAPRLTTPTLVLYGERDEIIPRRPFCRTLATLPPAARVAVYPDGYHMLTRDLGASAVLADLAAWLGDRDAPL PSGREFERQRERALNNLCAS
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI51242953, Length=294, Percent_Identity=25.8503401360544, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI6005786, Length=294, Percent_Identity=25.8503401360544, Blast_Score=89, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36577; Mature: 36446
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPAAWFAVRASVCFFAILLGVAGLAACATPVEQPCRDDAAAPRLEADRVIAADGAVLP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEECCCCEEE LSVWRPPGEVRAVVLALHGFNDYGHAFADVGPFLARRGIVTYAYDQRGFGRTAGRGLWPC EEECCCCHHHEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC RGRLVDDARSVAALLRETYPGRPLYLVGESMGGAVAMRLLADTPAAADGAVLVAAAVWSR CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH ATMNPLQRAALWLVAHTLPDLQLSGRGLGIRASDNDAMLHALREDPLVLKKARADTLWGL HHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHH ADLRDGAFAAAPRLTTPTLVLYGERDEIIPRRPFCRTLATLPPAARVAVYPDGYHMLTRD HHHCCCCHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHHHHH LGASAVLADLAAWLGDRDAPLPSGREFERQRERALNNLCAS CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRPAAWFAVRASVCFFAILLGVAGLAACATPVEQPCRDDAAAPRLEADRVIAADGAVLP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEECCCCEEE LSVWRPPGEVRAVVLALHGFNDYGHAFADVGPFLARRGIVTYAYDQRGFGRTAGRGLWPC EEECCCCHHHEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC RGRLVDDARSVAALLRETYPGRPLYLVGESMGGAVAMRLLADTPAAADGAVLVAAAVWSR CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH ATMNPLQRAALWLVAHTLPDLQLSGRGLGIRASDNDAMLHALREDPLVLKKARADTLWGL HHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHH ADLRDGAFAAAPRLTTPTLVLYGERDEIIPRRPFCRTLATLPPAARVAVYPDGYHMLTRD HHHCCCCHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEECCCCHHHHHHH LGASAVLADLAAWLGDRDAPLPSGREFERQRERALNNLCAS CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA