| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317320
Identifier: 74317320
GI number: 74317320
Start: 1373561
End: 1373935
Strand: Direct
Name: 74317320
Synonym: Tbd_1302
Alternate gene names: NA
Gene position: 1373561-1373935 (Clockwise)
Preceding gene: 74317319
Following gene: 74317321
Centisome position: 47.2
GC content: 65.33
Gene sequence:
>375_bases ATGGTGAAGACGATGGTCATGCGCAAGCGAGGCGCGGGTTTCACGCTGATCGAGATTCTCGTCGTGATGGCGATCGTCGC GACCCTGCTGACGATTGCCGCGCCGCGATATTTCAACCAGAGCGACCGGGCAAAGGAGGCCGTGCTGCGCCAGAACCTCG CGGTGATGCGCGACGCGATCGACAAGTATTACGGCGACGTCGGCGTCTATCCCGAAAGCCTCGACGCGCTCGTCGCCGGC AAGTACCTGCGCCGCATTCCGCCCGATCCGATCACCGAGAGCGACGCCACCTGGGTGACCGTCTCGCCTGAGGATCCGGC GCAGGGCAGGGTATTCGACGTTCGCAGCGGCTCGCCCGCGCACGCGGCATGGTGA
Upstream 100 bases:
>100_bases GCTACGCGAGCAGCGCCGAGGCGCCGCAGGAAGGCGAGGACGTCTACGACGTCTATTCGAAGAGCGACGGGGTCGGCCTG AATCAGGTGCCGTACCGGGA
Downstream 100 bases:
>100_bases GCGTCGCGCCGGCGCGACGCCGGCCAGGGCGGCCAGCGCAGGGCGGGTTCACCTACATCGGCCTGCTGGTGCTGATCGCC TTGCTCGGCTTCAGCCTCGC
Product: type II secretion system protein
Products: NA
Alternate protein names: General Secretion Pathway Protein G; N-Terminal Methylation Site; Methylation; Pilus Assembly Protein; General Secretion Pathway GSPG-Like Transmembrane Protein; General Secretion Pathway GSPG-Like; GSPG-Related Protein; N-Terminal Methylation; Type II Secretion System Pseudopilin OxpG; Pilin Domain-Containing Protein; Type II Secretion System Protein; General Secretion Pathway Protein; Fimbrial Protein Pilin; Secretion Protein; Prokaryotic N-Terminal Methylation Site
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MVKTMVMRKRGAGFTLIEILVVMAIVATLLTIAAPRYFNQSDRAKEAVLRQNLAVMRDAIDKYYGDVGVYPESLDALVAG KYLRRIPPDPITESDATWVTVSPEDPAQGRVFDVRSGSPAHAAW
Sequences:
>Translated_124_residues MVKTMVMRKRGAGFTLIEILVVMAIVATLLTIAAPRYFNQSDRAKEAVLRQNLAVMRDAIDKYYGDVGVYPESLDALVAG KYLRRIPPDPITESDATWVTVSPEDPAQGRVFDVRSGSPAHAAW >Mature_124_residues MVKTMVMRKRGAGFTLIEILVVMAIVATLLTIAAPRYFNQSDRAKEAVLRQNLAVMRDAIDKYYGDVGVYPESLDALVAG KYLRRIPPDPITESDATWVTVSPEDPAQGRVFDVRSGSPAHAAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13680; Mature: 13680
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKTMVMRKRGAGFTLIEILVVMAIVATLLTIAAPRYFNQSDRAKEAVLRQNLAVMRDAI CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHH DKYYGDVGVYPESLDALVAGKYLRRIPPDPITESDATWVTVSPEDPAQGRVFDVRSGSPA HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCC HAAW CCCC >Mature Secondary Structure MVKTMVMRKRGAGFTLIEILVVMAIVATLLTIAAPRYFNQSDRAKEAVLRQNLAVMRDAI CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHH DKYYGDVGVYPESLDALVAGKYLRRIPPDPITESDATWVTVSPEDPAQGRVFDVRSGSPA HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCC HAAW CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA