| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is xcpT [H]
Identifier: 74317311
GI number: 74317311
Start: 1365200
End: 1365739
Strand: Direct
Name: xcpT [H]
Synonym: Tbd_1293
Alternate gene names: 74317311
Gene position: 1365200-1365739 (Clockwise)
Preceding gene: 74317310
Following gene: 74317312
Centisome position: 46.92
GC content: 65.93
Gene sequence:
>540_bases GTGGGCGGCGCGGCAGTCCCCCGTCGCAGTAAATGTTGCGGGCGTCGATCGACGTCGACCGGCGCCCGCAGCCAACGGTT GTTTTGCAAGCGAGAGATGCCCATGCAGTGCAACAAACCCAATTCCCGTTTCCTTGGCAAAAGCCGGGGATTCACGCTCC TCGAACTCCTCGTCGTGCTGGTCATCATCGGCCTGCTCGCGGGGTACGTGGGGCCCAAGTATTTCGCCCAGATCGGCAAG TCCGAGGTGAAGACCGCGCGCGCTCAGATCGACGCGCTGGAAAAGGCGCTCGACCAGTACCGCCTCGACGTCGGCCGCTA CCCGGCGACCGAACAGGGCCTGGCCGCGCTGACCGAGCGGCCGCAGGACGAAGCCAAATGGGCCGGACCCTACCTCAAGA AGGCCGCGCCGCTCGACCCCTGGGGCAAGCCCTACGTCTACCAGCAGCCCGGCACCCACGGTGAGTACGACCTGTCTTCC TACGGTACCGACGGCCAGCCTGGCGGCACCGGCGAATCCGCCGACATCACGAACTGGTAA
Upstream 100 bases:
>100_bases TGGTGAACCCGCTGCCGGCGGCGGCTTACGGCAGCGCCGAGATCCAGCCGCTGAAAGGCGTGAGCAGCGCGTACTGAGGC GTGCGGGGGGCGTCGCCCGA
Downstream 100 bases:
>100_bases GCGCGATGGCACAGTTCGAGGTCCGTGGGGTGGGAAGCGCGTCGGCGATCGTCTCGCTCGTGCTCGAGGCGCCTGACGCC GCGAGTGCCGAGGCGCGCGC
Product: tyep II secretion system protein G
Products: NA
Alternate protein names: PilD-dependent protein pddA [H]
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MGGAAVPRRSKCCGRRSTSTGARSQRLFCKREMPMQCNKPNSRFLGKSRGFTLLELLVVLVIIGLLAGYVGPKYFAQIGK SEVKTARAQIDALEKALDQYRLDVGRYPATEQGLAALTERPQDEAKWAGPYLKKAAPLDPWGKPYVYQQPGTHGEYDLSS YGTDGQPGGTGESADITNW
Sequences:
>Translated_179_residues MGGAAVPRRSKCCGRRSTSTGARSQRLFCKREMPMQCNKPNSRFLGKSRGFTLLELLVVLVIIGLLAGYVGPKYFAQIGK SEVKTARAQIDALEKALDQYRLDVGRYPATEQGLAALTERPQDEAKWAGPYLKKAAPLDPWGKPYVYQQPGTHGEYDLSS YGTDGQPGGTGESADITNW >Mature_178_residues GGAAVPRRSKCCGRRSTSTGARSQRLFCKREMPMQCNKPNSRFLGKSRGFTLLELLVVLVIIGLLAGYVGPKYFAQIGKS EVKTARAQIDALEKALDQYRLDVGRYPATEQGLAALTERPQDEAKWAGPYLKKAAPLDPWGKPYVYQQPGTHGEYDLSSY GTDGQPGGTGESADITNW
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP G family [H]
Homologues:
Organism=Escherichia coli, GI1789725, Length=141, Percent_Identity=48.2269503546099, Blast_Score=98, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000983 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR013545 - InterPro: IPR010054 [H]
Pfam domain/function: PF08334 GSPII_G; PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 19589; Mature: 19457
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGAAVPRRSKCCGRRSTSTGARSQRLFCKREMPMQCNKPNSRFLGKSRGFTLLELLVVL CCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHH VIIGLLAGYVGPKYFAQIGKSEVKTARAQIDALEKALDQYRLDVGRYPATEQGLAALTER HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC PQDEAKWAGPYLKKAAPLDPWGKPYVYQQPGTHGEYDLSSYGTDGQPGGTGESADITNW CCHHHHHCCHHHHHCCCCCCCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GGAAVPRRSKCCGRRSTSTGARSQRLFCKREMPMQCNKPNSRFLGKSRGFTLLELLVVL CCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHH VIIGLLAGYVGPKYFAQIGKSEVKTARAQIDALEKALDQYRLDVGRYPATEQGLAALTER HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC PQDEAKWAGPYLKKAAPLDPWGKPYVYQQPGTHGEYDLSSYGTDGQPGGTGESADITNW CCHHHHHCCHHHHHCCCCCCCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1588814; 1309616; 10984043 [H]