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The map label for this gene is motC [H]

Identifier: 74317268

GI number: 74317268

Start: 1312592

End: 1313329

Strand: Direct

Name: motC [H]

Synonym: Tbd_1250

Alternate gene names: 74317268

Gene position: 1312592-1313329 (Clockwise)

Preceding gene: 74317267

Following gene: 74317269

Centisome position: 45.11

GC content: 67.75

Gene sequence:

>738_bases
GTGGATCGCAGCAGCCTGATCGGGCTCGCGCTCGGCGGCGCCGCGATCCTCGGCGGCCAGGCGATCGAAGGCGGTCACCT
CGGGCTGTTCGTTCAGCCGGCGGCCCTGCTCATCGTCGTCGGCGGCACGCTCGCCGCGGTGCTGCTGCACCATCCCTTGC
CGGTTTTCCTGCGCGGCGTGCGCATGGCGAAATGGGCCTTCCATCCGCCGCCCTGCGAGGCTTCGACGCTCATCCGCCGC
ATCGTGCAGTGGTCGCATACGGCGCGCCAGGAGAGCATCCTCGCGCTCGAGAAACATCTGAACCTGACCCACGACCCGTT
CCAGCGGACCGGGCTGCAACTGCTGATCGACGGTGCAGACCCGGTGAAATTGCGCGAGACGCTCGACGTGCAGATCGTCG
GCTTCGAGACCGCCGAACGGCAGGCCGCGCGCGTATGGGAGGTGGCGGGCGGTTACGCGCCGACGCTCGGTATTCTCGGC
GCCGTCATGGGGCTGATCCACGTGATGGAGAATCTGAGCGATCCGGGCAAGCTCGGCAGCGGCATTGCGGTCGCCTTCGT
CGCGACGATCTACGGGGTCGGGCTCGCCAACCTGCTGTTCCTGCCGGTCGCCAACAAGATCAAGTTCACGATCGCGCGGC
GGGTCACCGAGCGCGAGATCGTCTGCGACGGCCTCATCGCGATCGCGCAGGGCGACAACCCGCGCATCATCGAGGCCAGG
CTGAAGGGCTATCTGTGA

Upstream 100 bases:

>100_bases
TGCGCGAGATCGCCGAGGTCTTCGGCGTCAGCGAGTCGCGCATCTGCCAGCTGCACGGCCAGGCGATTGCGCGGCTGCGC
GCCCGGCTCAAGGAAGATTC

Downstream 100 bases:

>100_bases
TCCCAGGAGCCGGGGATGATCGCTTCCGAGACGCTGGCAGGCCGACGACCACCGACGTTCGCACCTTAGGTGTGGACGGC
CACCGCCCTGAAGACGCTAC

Product: flagellar motor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MDRSSLIGLALGGAAILGGQAIEGGHLGLFVQPAALLIVVGGTLAAVLLHHPLPVFLRGVRMAKWAFHPPPCEASTLIRR
IVQWSHTARQESILALEKHLNLTHDPFQRTGLQLLIDGADPVKLRETLDVQIVGFETAERQAARVWEVAGGYAPTLGILG
AVMGLIHVMENLSDPGKLGSGIAVAFVATIYGVGLANLLFLPVANKIKFTIARRVTEREIVCDGLIAIAQGDNPRIIEAR
LKGYL

Sequences:

>Translated_245_residues
MDRSSLIGLALGGAAILGGQAIEGGHLGLFVQPAALLIVVGGTLAAVLLHHPLPVFLRGVRMAKWAFHPPPCEASTLIRR
IVQWSHTARQESILALEKHLNLTHDPFQRTGLQLLIDGADPVKLRETLDVQIVGFETAERQAARVWEVAGGYAPTLGILG
AVMGLIHVMENLSDPGKLGSGIAVAFVATIYGVGLANLLFLPVANKIKFTIARRVTEREIVCDGLIAIAQGDNPRIIEAR
LKGYL
>Mature_245_residues
MDRSSLIGLALGGAAILGGQAIEGGHLGLFVQPAALLIVVGGTLAAVLLHHPLPVFLRGVRMAKWAFHPPPCEASTLIRR
IVQWSHTARQESILALEKHLNLTHDPFQRTGLQLLIDGADPVKLRETLDVQIVGFETAERQAARVWEVAGGYAPTLGILG
AVMGLIHVMENLSDPGKLGSGIAVAFVATIYGVGLANLLFLPVANKIKFTIARRVTEREIVCDGLIAIAQGDNPRIIEAR
LKGYL

Specific function: PomA and PomB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell inner membrane; Multi- pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 26201; Mature: 26201

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRSSLIGLALGGAAILGGQAIEGGHLGLFVQPAALLIVVGGTLAAVLLHHPLPVFLRGV
CCCCCEEEEEECCHHHCCCCEECCCCEEEEECCHHEEEEHHHHHHHHHHHCCHHHHHHHH
RMAKWAFHPPPCEASTLIRRIVQWSHTARQESILALEKHLNLTHDPFQRTGLQLLIDGAD
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEECCCC
PVKLRETLDVQIVGFETAERQAARVWEVAGGYAPTLGILGAVMGLIHVMENLSDPGKLGS
CEEEHHCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
GIAVAFVATIYGVGLANLLFLPVANKIKFTIARRVTEREIVCDGLIAIAQGDNPRIIEAR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEHHH
LKGYL
HCCCC
>Mature Secondary Structure
MDRSSLIGLALGGAAILGGQAIEGGHLGLFVQPAALLIVVGGTLAAVLLHHPLPVFLRGV
CCCCCEEEEEECCHHHCCCCEECCCCEEEEECCHHEEEEHHHHHHHHHHHCCHHHHHHHH
RMAKWAFHPPPCEASTLIRRIVQWSHTARQESILALEKHLNLTHDPFQRTGLQLLIDGAD
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEECCCC
PVKLRETLDVQIVGFETAERQAARVWEVAGGYAPTLGILGAVMGLIHVMENLSDPGKLGS
CEEEHHCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
GIAVAFVATIYGVGLANLLFLPVANKIKFTIARRVTEREIVCDGLIAIAQGDNPRIIEAR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEHHH
LKGYL
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9260952 [H]