| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317223
Identifier: 74317223
GI number: 74317223
Start: 1263964
End: 1264392
Strand: Reverse
Name: 74317223
Synonym: Tbd_1205
Alternate gene names: NA
Gene position: 1264392-1263964 (Counterclockwise)
Preceding gene: 74317224
Following gene: 74317222
Centisome position: 43.45
GC content: 67.6
Gene sequence:
>429_bases GTGCGACTCTGGTCTCTTCACCCGCAATACCTCGACCCGCAGGGCCTCGTCGCGCTCTGGCGCGAAGCGCTTCTCGCCCA GGCGGTGCTGCGCGGAGACACGCGCGGCTACCGCAACCATCCGCAGCTCGAGCGTTTCAGGAATCATGCGGCGCCGCTGG CCGCGATTGCCGCCTATCTCGAGGCCGTGTACGCCGAAGCGGGACGGCGGGGCTACGCTTTCGACAAGAGCAAGATCGGC GCGCCGTCCGAGCGGTCCACGCTCGTCGTCACAGCCGGGCAGCTCGACTACGAGTGGGCGCACCTGATGAAGAAACTGCA GGCGCGCAATCCGACCTGGTTTCAGCGGTGGCACGGAACGACGACGCCGGCGCCTCATCCGCTGTTCGAGGTGTGTCCAG GCGACGTCGCCTCGTGGGAACGCCGCTAA
Upstream 100 bases:
>100_bases CAGCGTGGTGACGCGCGACATCCCGCCCGACGTGGTCGCGGTTGGAAATCCGGGCCGCTTCGTCCGCTCGCTTCCCCCCG ACGCTGGCTGAACGGCTCAC
Downstream 100 bases:
>100_bases TTAGGGCAATCAAGGGCCAGCACGGGGGCTGAACCCATCGGGGCCTTCACCCGGACAAGAGGGATTCAAGGCGAGGTGCT ATAGAGAACAGGATCGACGG
Product: DNA-(apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase
Products: NA
Alternate protein names: DNA-(Apurinic Or Apyrimidinic Site) Lyase; Serine/Threonine Protein Kinase; 50S Ribosomal Protein L
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MRLWSLHPQYLDPQGLVALWREALLAQAVLRGDTRGYRNHPQLERFRNHAAPLAAIAAYLEAVYAEAGRRGYAFDKSKIG APSERSTLVVTAGQLDYEWAHLMKKLQARNPTWFQRWHGTTTPAPHPLFEVCPGDVASWERR
Sequences:
>Translated_142_residues MRLWSLHPQYLDPQGLVALWREALLAQAVLRGDTRGYRNHPQLERFRNHAAPLAAIAAYLEAVYAEAGRRGYAFDKSKIG APSERSTLVVTAGQLDYEWAHLMKKLQARNPTWFQRWHGTTTPAPHPLFEVCPGDVASWERR >Mature_142_residues MRLWSLHPQYLDPQGLVALWREALLAQAVLRGDTRGYRNHPQLERFRNHAAPLAAIAAYLEAVYAEAGRRGYAFDKSKIG APSERSTLVVTAGQLDYEWAHLMKKLQARNPTWFQRWHGTTTPAPHPLFEVCPGDVASWERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16219; Mature: 16219
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLWSLHPQYLDPQGLVALWREALLAQAVLRGDTRGYRNHPQLERFRNHAAPLAAIAAYL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHH EAVYAEAGRRGYAFDKSKIGAPSERSTLVVTAGQLDYEWAHLMKKLQARNPTWFQRWHGT HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHCCC TTPAPHPLFEVCPGDVASWERR CCCCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure MRLWSLHPQYLDPQGLVALWREALLAQAVLRGDTRGYRNHPQLERFRNHAAPLAAIAAYL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHH EAVYAEAGRRGYAFDKSKIGAPSERSTLVVTAGQLDYEWAHLMKKLQARNPTWFQRWHGT HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHCCC TTPAPHPLFEVCPGDVASWERR CCCCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA