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The map label for this gene is bphB [H]

Identifier: 74317211

GI number: 74317211

Start: 1254910

End: 1257483

Strand: Reverse

Name: bphB [H]

Synonym: Tbd_1193

Alternate gene names: 74317211

Gene position: 1257483-1254910 (Counterclockwise)

Preceding gene: 74317212

Following gene: 74317210

Centisome position: 43.22

GC content: 66.78

Gene sequence:

>2574_bases
GTGCAAGCCGTAGACGCCGCCTCACAACGACCGGAATCTGCGTGGCAGCCCGCGTTCGTGCGGCGCTTTCTGGCCATCTG
GTTGCCAGGCCTGTTGGTGTTGGGTGCCGTCATCTGGGCGTTTTACGCCGTGCAGGCGAAGAGCGCGCTTGCACTCTTGA
AAGCCGCGGAGCGCGAGGCGATCCAGTTGTCGGTCCAGGCGAGCCAGAGCGAATCCGCAGACGTCCGTTCCGATCTGCTC
TACCTGTCGGACCAGTACACCCTCCTCGACGACATGACCCGCGCAGAGTCCGACGTGCACGCCGGGCTCGCCGCGCGCTA
TTCCGCCTTTGCGACGCGCAAGAAGGTCTACGACCGGTTGCGTCTGCTCGACCTGCGCGGCCGCGAGGCCGTTCGCGTCG
ACTGGAACGATGGGAGTCCGCTGGGCGTGGCACGCGAGCGATTGCGGGATGCGTCCGGCAGCGCCGACTTCCATGCGATG
CTCGCGCTGGAGCGGGACGAAATCTACGTCTCGCGCCTCGACCTCGACGGCGGGCAGGCCACTCCGGCGCGACCGCTCAA
ACCCACCTTGCGTCTCGCGACCCCGGTCTACGACCGGCAAGGCAACAGACGCGGCATCATTGTGCTCGACTATCTGGTGG
AGCTGTTCCTCGACCGTCTGCGCAACATCCGCGAGTCCGACCGTCAGCCCCGCTCGATCCGGCTCCTGAGCGCCGACGGT
TACACACTGCCCGATCAGGAAAAGCCCGATGGCCCCGACCCGATGGGTCAGCGTGAAACCGAAAGCCGACTCGGCGAACG
CGATCCTCAGGCGTGGCAGCGGATCGGCAGCGGCGCCGCCGAAGGTCAGTTCGTGACCGGTCAGGGCTTGTACACCTACG
CCTGGATCGACCCCCTGTCGCCGCCGGGCGCGGCCCCTGCCGACGCGGACACCCGACGCGCGCTGTTGCTGGCGTACAAG
CCGGCGGCGGCGGTCGACGCCATCGGCGGCACGCTCAAGCAGCGGCTCTGGCTGGTGTTCGGCGTGCTCGCGCTATTGTT
CACCTTCGCCGCCTGGGCGATCACGTTCTACAGCATGCGGCGCCGTATGGCCGAGGAGAACGTGCGGGCCAGCGAGGCAC
GTTTTCGCGCGCTGCTCGAATCCGCGCCGGATGCGATCGTGATCGCCGACCCGAAGGGCCGCATAGAGCTGGCGAATGCG
CAGGCGGAGAAATATTTCGGCTACACGCGCGATGAGTTGCTGCACCAGTCGATCGAGATCCTGGTTCCCGAGTCGCTGCG
CGACCGCCATGTCTCCCACCGCGCGAACTACGCCGCCGATCCCTATCCGCGTCCGATGGGCGCCGGCCTCGAGCTGTTCG
GGCGGCGCAAGGATGGCAGCGAATTTCCGATCGAGATCAGCCTGAGCCCGCTGCAAACCCCTCAGGGAATGGTCGTGACC
GCGATCATTCGCGACATCAGCGCACGCAAGCAGATCGAACGTCAGCGCAAGGACGCGCAGACACGCTATCGTGAACTTAT
GGACAACCTGCCTGTAGGGGTATACCGCAAGACGGCCGGTGCGGACGGGCGCTTCCTGGAGGTGAACCCGGCGCTGGTGA
GCATGCTCGAGGCCGACTCGGCCGCGGCGCTGCTCGAACGCCCGCTCGCGACCTTCAGGACGGCCGAGGGCCGGCCTCTC
TTCGGCGGAGACGAACGCCAGCTCGACGCGGTCGTCAACGCCGAAATCGAGCTGCTGACCCTCAAGGGCCGCCCGTTCCA
CGGTGCCATCAGCGCCCGCCTGCGGCGCGAGGCGGACGGCAGGACGTATTACGACGGCATCATCGAGGATGTCACCGCGC
GCAAGGAAATAGAGCGCCAGCTCGAGAGTCGCACCGCCGAACTGGAGGCGATCAATCGCGAACTCGAGGCGTTCAGCTAT
TCCGTCTCGCACGACCTGCGCGCGCCGCTGCGCGCGATCGACGGCTTCAGCCGCATTTTGCTCACCGACTACACCGAGCG
CCTCGACGAGACCGGGCGCGACCGCCTCGGACGGATACGCCGCGCGGCCCAGCACATGGGCACGCTGATCGACGACCTGC
TCAAGCTGTCGCGCGTCACCCGCACCGAGTTGAAGCCGGAAGACGTCGACATGAGCGCGCTGGCCGAAGACGTCGCCAAC
GATCTGCGCCGGCAGACGCCCGAGCACGAGGTGGCTTTCAGCATCGCGCCTGCCTTGCATGCGAACGGCGACCGCGGCCT
GCTGCGCATCGTCCTCGACAACCTGCTCGGCAATGCCTGGAAATTCACCGGCGGCCGCCCCGACGCGCGCGTGTCGCTCG
ATGTGGACCTCCGTGGCGGACAAACCGTCTACGTCGTTAGCGACAACGGCGCAGGTTTTGACATGGCCTACGCCGACAAG
CTGTTCGGCGTCTTCCAGCGGCTGCACGACGTCAAGGAATTTCCGGGAACCGGCATCGGACTTGCGACCGTTCAGCGCAT
CGTCCACAAGCACGGCGGCCGCATCTGGGCCGAGAGCGAAGTCGGCAGGGGCGCGCGGTTTTACTTCACACTGGAGGCGG
AGGGAGGAGCGTGA

Upstream 100 bases:

>100_bases
TCAAAGACCCAGCATCGACACACCGAATCTCGTCGCGAGGTAAAGCGCCCGCGCGCGTGATCGCCTTGCAGTCGCCCCGG
CGAGAAAAATCGAACCGACC

Downstream 100 bases:

>100_bases
GCGACAAGAGCATATTGCTGGTCGAAGACAACCCGGACGACGAAGCGCTGACCGTCCATGCCCTGGAAACCAACAAAATC
GGCAACACGCTCGCGGTCGC

Product: multi-sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 857; Mature: 857

Protein sequence:

>857_residues
MQAVDAASQRPESAWQPAFVRRFLAIWLPGLLVLGAVIWAFYAVQAKSALALLKAAEREAIQLSVQASQSESADVRSDLL
YLSDQYTLLDDMTRAESDVHAGLAARYSAFATRKKVYDRLRLLDLRGREAVRVDWNDGSPLGVARERLRDASGSADFHAM
LALERDEIYVSRLDLDGGQATPARPLKPTLRLATPVYDRQGNRRGIIVLDYLVELFLDRLRNIRESDRQPRSIRLLSADG
YTLPDQEKPDGPDPMGQRETESRLGERDPQAWQRIGSGAAEGQFVTGQGLYTYAWIDPLSPPGAAPADADTRRALLLAYK
PAAAVDAIGGTLKQRLWLVFGVLALLFTFAAWAITFYSMRRRMAEENVRASEARFRALLESAPDAIVIADPKGRIELANA
QAEKYFGYTRDELLHQSIEILVPESLRDRHVSHRANYAADPYPRPMGAGLELFGRRKDGSEFPIEISLSPLQTPQGMVVT
AIIRDISARKQIERQRKDAQTRYRELMDNLPVGVYRKTAGADGRFLEVNPALVSMLEADSAAALLERPLATFRTAEGRPL
FGGDERQLDAVVNAEIELLTLKGRPFHGAISARLRREADGRTYYDGIIEDVTARKEIERQLESRTAELEAINRELEAFSY
SVSHDLRAPLRAIDGFSRILLTDYTERLDETGRDRLGRIRRAAQHMGTLIDDLLKLSRVTRTELKPEDVDMSALAEDVAN
DLRRQTPEHEVAFSIAPALHANGDRGLLRIVLDNLLGNAWKFTGGRPDARVSLDVDLRGGQTVYVVSDNGAGFDMAYADK
LFGVFQRLHDVKEFPGTGIGLATVQRIVHKHGGRIWAESEVGRGARFYFTLEAEGGA

Sequences:

>Translated_857_residues
MQAVDAASQRPESAWQPAFVRRFLAIWLPGLLVLGAVIWAFYAVQAKSALALLKAAEREAIQLSVQASQSESADVRSDLL
YLSDQYTLLDDMTRAESDVHAGLAARYSAFATRKKVYDRLRLLDLRGREAVRVDWNDGSPLGVARERLRDASGSADFHAM
LALERDEIYVSRLDLDGGQATPARPLKPTLRLATPVYDRQGNRRGIIVLDYLVELFLDRLRNIRESDRQPRSIRLLSADG
YTLPDQEKPDGPDPMGQRETESRLGERDPQAWQRIGSGAAEGQFVTGQGLYTYAWIDPLSPPGAAPADADTRRALLLAYK
PAAAVDAIGGTLKQRLWLVFGVLALLFTFAAWAITFYSMRRRMAEENVRASEARFRALLESAPDAIVIADPKGRIELANA
QAEKYFGYTRDELLHQSIEILVPESLRDRHVSHRANYAADPYPRPMGAGLELFGRRKDGSEFPIEISLSPLQTPQGMVVT
AIIRDISARKQIERQRKDAQTRYRELMDNLPVGVYRKTAGADGRFLEVNPALVSMLEADSAAALLERPLATFRTAEGRPL
FGGDERQLDAVVNAEIELLTLKGRPFHGAISARLRREADGRTYYDGIIEDVTARKEIERQLESRTAELEAINRELEAFSY
SVSHDLRAPLRAIDGFSRILLTDYTERLDETGRDRLGRIRRAAQHMGTLIDDLLKLSRVTRTELKPEDVDMSALAEDVAN
DLRRQTPEHEVAFSIAPALHANGDRGLLRIVLDNLLGNAWKFTGGRPDARVSLDVDLRGGQTVYVVSDNGAGFDMAYADK
LFGVFQRLHDVKEFPGTGIGLATVQRIVHKHGGRIWAESEVGRGARFYFTLEAEGGA
>Mature_857_residues
MQAVDAASQRPESAWQPAFVRRFLAIWLPGLLVLGAVIWAFYAVQAKSALALLKAAEREAIQLSVQASQSESADVRSDLL
YLSDQYTLLDDMTRAESDVHAGLAARYSAFATRKKVYDRLRLLDLRGREAVRVDWNDGSPLGVARERLRDASGSADFHAM
LALERDEIYVSRLDLDGGQATPARPLKPTLRLATPVYDRQGNRRGIIVLDYLVELFLDRLRNIRESDRQPRSIRLLSADG
YTLPDQEKPDGPDPMGQRETESRLGERDPQAWQRIGSGAAEGQFVTGQGLYTYAWIDPLSPPGAAPADADTRRALLLAYK
PAAAVDAIGGTLKQRLWLVFGVLALLFTFAAWAITFYSMRRRMAEENVRASEARFRALLESAPDAIVIADPKGRIELANA
QAEKYFGYTRDELLHQSIEILVPESLRDRHVSHRANYAADPYPRPMGAGLELFGRRKDGSEFPIEISLSPLQTPQGMVVT
AIIRDISARKQIERQRKDAQTRYRELMDNLPVGVYRKTAGADGRFLEVNPALVSMLEADSAAALLERPLATFRTAEGRPL
FGGDERQLDAVVNAEIELLTLKGRPFHGAISARLRREADGRTYYDGIIEDVTARKEIERQLESRTAELEAINRELEAFSY
SVSHDLRAPLRAIDGFSRILLTDYTERLDETGRDRLGRIRRAAQHMGTLIDDLLKLSRVTRTELKPEDVDMSALAEDVAN
DLRRQTPEHEVAFSIAPALHANGDRGLLRIVLDNLLGNAWKFTGGRPDARVSLDVDLRGGQTVYVVSDNGAGFDMAYADK
LFGVFQRLHDVKEFPGTGIGLATVQRIVHKHGGRIWAESEVGRGARFYFTLEAEGGA

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=270, Percent_Identity=31.8518518518519, Blast_Score=103, Evalue=7e-23,
Organism=Escherichia coli, GI1788549, Length=251, Percent_Identity=31.0756972111554, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1789149, Length=258, Percent_Identity=29.8449612403101, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI145693157, Length=251, Percent_Identity=29.0836653386454, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786912, Length=221, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=6e-15,
Organism=Escherichia coli, GI1786600, Length=220, Percent_Identity=29.0909090909091, Blast_Score=76, Evalue=1e-14,
Organism=Escherichia coli, GI1790436, Length=217, Percent_Identity=29.4930875576037, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1788713, Length=271, Percent_Identity=22.8782287822878, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1790861, Length=249, Percent_Identity=27.3092369477912, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 95453; Mature: 95453

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAVDAASQRPESAWQPAFVRRFLAIWLPGLLVLGAVIWAFYAVQAKSALALLKAAEREA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQLSVQASQSESADVRSDLLYLSDQYTLLDDMTRAESDVHAGLAARYSAFATRKKVYDRL
EEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLDLRGREAVRVDWNDGSPLGVARERLRDASGSADFHAMLALERDEIYVSRLDLDGGQA
HHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEECCCCCC
TPARPLKPTLRLATPVYDRQGNRRGIIVLDYLVELFLDRLRNIRESDRQPRSIRLLSADG
CCCCCCCCHHHHHCCHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
YTLPDQEKPDGPDPMGQRETESRLGERDPQAWQRIGSGAAEGQFVTGQGLYTYAWIDPLS
CCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCEEEECCCEEEEEEECCCC
PPGAAPADADTRRALLLAYKPAAAVDAIGGTLKQRLWLVFGVLALLFTFAAWAITFYSMR
CCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRMAEENVRASEARFRALLESAPDAIVIADPKGRIELANAQAEKYFGYTRDELLHQSIEI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCHHHHHCCCCHHHHHHHHHHH
LVPESLRDRHVSHRANYAADPYPRPMGAGLELFGRRKDGSEFPIEISLSPLQTPQGMVVT
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCHHHH
AIIRDISARKQIERQRKDAQTRYRELMDNLPVGVYRKTAGADGRFLEVNPALVSMLEADS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEECHHHHHHHHCCH
AAALLERPLATFRTAEGRPLFGGDERQLDAVVNAEIELLTLKGRPFHGAISARLRREADG
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCC
RTYYDGIIEDVTARKEIERQLESRTAELEAINRELEAFSYSVSHDLRAPLRAIDGFSRIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTDYTERLDETGRDRLGRIRRAAQHMGTLIDDLLKLSRVTRTELKPEDVDMSALAEDVAN
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DLRRQTPEHEVAFSIAPALHANGDRGLLRIVLDNLLGNAWKFTGGRPDARVSLDVDLRGG
HHHHCCCCHHEEEEECHHHCCCCCCHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEECCC
QTVYVVSDNGAGFDMAYADKLFGVFQRLHDVKEFPGTGIGLATVQRIVHKHGGRIWAESE
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEECCC
VGRGARFYFTLEAEGGA
CCCCEEEEEEEECCCCC
>Mature Secondary Structure
MQAVDAASQRPESAWQPAFVRRFLAIWLPGLLVLGAVIWAFYAVQAKSALALLKAAEREA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQLSVQASQSESADVRSDLLYLSDQYTLLDDMTRAESDVHAGLAARYSAFATRKKVYDRL
EEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLDLRGREAVRVDWNDGSPLGVARERLRDASGSADFHAMLALERDEIYVSRLDLDGGQA
HHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEECCCCCC
TPARPLKPTLRLATPVYDRQGNRRGIIVLDYLVELFLDRLRNIRESDRQPRSIRLLSADG
CCCCCCCCHHHHHCCHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
YTLPDQEKPDGPDPMGQRETESRLGERDPQAWQRIGSGAAEGQFVTGQGLYTYAWIDPLS
CCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCEEEECCCEEEEEEECCCC
PPGAAPADADTRRALLLAYKPAAAVDAIGGTLKQRLWLVFGVLALLFTFAAWAITFYSMR
CCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRMAEENVRASEARFRALLESAPDAIVIADPKGRIELANAQAEKYFGYTRDELLHQSIEI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCHHHHHCCCCHHHHHHHHHHH
LVPESLRDRHVSHRANYAADPYPRPMGAGLELFGRRKDGSEFPIEISLSPLQTPQGMVVT
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCHHHH
AIIRDISARKQIERQRKDAQTRYRELMDNLPVGVYRKTAGADGRFLEVNPALVSMLEADS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEECHHHHHHHHCCH
AAALLERPLATFRTAEGRPLFGGDERQLDAVVNAEIELLTLKGRPFHGAISARLRREADG
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCC
RTYYDGIIEDVTARKEIERQLESRTAELEAINRELEAFSYSVSHDLRAPLRAIDGFSRIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTDYTERLDETGRDRLGRIRRAAQHMGTLIDDLLKLSRVTRTELKPEDVDMSALAEDVAN
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DLRRQTPEHEVAFSIAPALHANGDRGLLRIVLDNLLGNAWKFTGGRPDARVSLDVDLRGG
HHHHCCCCHHEEEEECHHHCCCCCCHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEECCC
QTVYVVSDNGAGFDMAYADKLFGVFQRLHDVKEFPGTGIGLATVQRIVHKHGGRIWAESE
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEECCC
VGRGARFYFTLEAEGGA
CCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]