| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is rcp1 [H]
Identifier: 74317210
GI number: 74317210
Start: 1254470
End: 1254913
Strand: Reverse
Name: rcp1 [H]
Synonym: Tbd_1192
Alternate gene names: 74317210
Gene position: 1254913-1254470 (Counterclockwise)
Preceding gene: 74317211
Following gene: 74317209
Centisome position: 43.13
GC content: 65.32
Gene sequence:
>444_bases GTGAGCGACAAGAGCATATTGCTGGTCGAAGACAACCCGGACGACGAAGCGCTGACCGTCCATGCCCTGGAAACCAACAA AATCGGCAACACGCTCGCGGTCGCGCGCGACGGCGTCGAAGCGCTGGACTACCTGTTCGGGACCGGCAGCCACGCGGGAC GCCCCGTCGCCGATCTCCCCGCGGTCGTGCTGCTCGACCTCAAGCTGCCCAAGATCGACGGGCTGGAAGTGCTTCGCCGT ATCCGTTCCGACGAGCGGACACGGCTGCTGCCGGTCGTGATCCTGACGTCGTCCAACGAGGAGGAGGACCGCATCAAGGG CTATTCGCTGGGTGCCAACAGTTATGTGCGCAAGCCCGTCGACTTCGACGACTTCGTCCGGGCGGCGGGACAGCTCGGCC TCTACTGGCTGCTGCTAAACCAGGCGCCGCCTGCGGTCGGCTAG
Upstream 100 bases:
>100_bases TTCAGCGCATCGTCCACAAGCACGGCGGCCGCATCTGGGCCGAGAGCGAAGTCGGCAGGGGCGCGCGGTTTTACTTCACA CTGGAGGCGGAGGGAGGAGC
Downstream 100 bases:
>100_bases GTATATCGAGGCGAGGCAGTTGAGGACGGCATGAAAAGCAAGACGAACCCCGACACCGATCAGGGCGGGCTGCGCGCCCT GATCGTCGAAGACTCCGAAG
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSDKSILLVEDNPDDEALTVHALETNKIGNTLAVARDGVEALDYLFGTGSHAGRPVADLPAVVLLDLKLPKIDGLEVLRR IRSDERTRLLPVVILTSSNEEEDRIKGYSLGANSYVRKPVDFDDFVRAAGQLGLYWLLLNQAPPAVG
Sequences:
>Translated_147_residues MSDKSILLVEDNPDDEALTVHALETNKIGNTLAVARDGVEALDYLFGTGSHAGRPVADLPAVVLLDLKLPKIDGLEVLRR IRSDERTRLLPVVILTSSNEEEDRIKGYSLGANSYVRKPVDFDDFVRAAGQLGLYWLLLNQAPPAVG >Mature_146_residues SDKSILLVEDNPDDEALTVHALETNKIGNTLAVARDGVEALDYLFGTGSHAGRPVADLPAVVLLDLKLPKIDGLEVLRRI RSDERTRLLPVVILTSSNEEEDRIKGYSLGANSYVRKPVDFDDFVRAAGQLGLYWLLLNQAPPAVG
Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=123, Percent_Identity=32.520325203252, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI87082012, Length=129, Percent_Identity=31.7829457364341, Blast_Score=61, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 16050; Mature: 15919
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKSILLVEDNPDDEALTVHALETNKIGNTLAVARDGVEALDYLFGTGSHAGRPVADLP CCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEHHHCCHHHHHHHHCCCCCCCCCCHHCC AVVLLDLKLPKIDGLEVLRRIRSDERTRLLPVVILTSSNEEEDRIKGYSLGANSYVRKPV EEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHCCEEECCCCCCCCCC DFDDFVRAAGQLGLYWLLLNQAPPAVG CHHHHHHHHHCCCEEEEEECCCCCCCC >Mature Secondary Structure SDKSILLVEDNPDDEALTVHALETNKIGNTLAVARDGVEALDYLFGTGSHAGRPVADLP CCCCEEEEECCCCCCEEEEEEEECCCCCCEEEHHHCCHHHHHHHHCCCCCCCCCCHHCC AVVLLDLKLPKIDGLEVLRRIRSDERTRLLPVVILTSSNEEEDRIKGYSLGANSYVRKPV EEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHCCEEECCCCCCCCCC DFDDFVRAAGQLGLYWLLLNQAPPAVG CHHHHHHHHHCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 9278513 [H]