The gene/protein map for NC_007404 is currently unavailable.
Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is treZ [H]

Identifier: 74317191

GI number: 74317191

Start: 1227318

End: 1229096

Strand: Direct

Name: treZ [H]

Synonym: Tbd_1173

Alternate gene names: 74317191

Gene position: 1227318-1229096 (Clockwise)

Preceding gene: 74317190

Following gene: 74317192

Centisome position: 42.18

GC content: 68.41

Gene sequence:

>1779_bases
ATGCCGTTCGGCACCCGGATCACGCCCGAGGGCGTGCGATTTCGCCTGTGGGCGCCGGGATGCGAGCGGGTGATGCTGCA
CATCGAGGAGGGGGCGGCAGTGGGGCGGATGATGATGCCGAGCGGCGACGGCTGGTTCGAGCTCCTAGTCGATGGGGCAG
GTGCGGGAACGCCTTATCGCTTCGAGGTGAACGACGGCCTGCGCGTCCCCGACCCGGCCTCGCGTTTCAATCCCGACGAC
GTGCACGGAGCGAGCGTCGTCGTCGACCCGACCGCCTTCGCCTGGCGTGACACGGCGTGGAAGGGGCGGCCCTGGGAAGA
AGCAGTCGTGTACGAACTGCACGTCGGGACCTTCTCGCCGTCTGGCACCTTCGCCGGCGTGATCGAGCGGCTCGACTACC
TCGTCGACCTCGGTGTCACGGCGATCGAGCTGATGCCGGTCGCGGACTTTCCGGGTGTGCACAACTGGGGTTACGACGGC
GTCCTGCTGTTTGCGCCGGACAGCCGCTACGGCACGCCCGACGACCTCAAGGCGCTCGTCCAGTCCGCGCACGACAAGGG
GCTGATGGTGTTGCTCGACGTCGTCTACAACCATTTCGGCCCCGAGGGGAATTACCTGCATGTGTACGCGCGCAAGTTCT
TCAGCGAGCGCCACCACACGCTGTGGGGCGCCGCGATCAACTTCGACGGCTCCGGCAGCCGTACCGTGCGTGATTTCTTC
ATCCACAACGCGCTCTACTGGCTGCAGGAATACCACTTCGACGGCCTGCGCCTCGACGCGGTGCACGCGATCATCGACGA
TTCGGCGCGCCACATCCTCACCGAGCTTGCCGAGCGCGTGCACGCAGAGATCGGCAGCGAGCGTGCCGTGCATCTGATCC
TCGAGAACGATGCCAACGAAGCGCACCACCTTGGACAAGGTGGCTACACGGCGCAATGGAACGACGACATCCATCACGCG
CTGCACGTGCTCGCGACCGGGGAAGCCGACGGCTATTACGGCGACTACGCCGATGCGCCGCTCGTCCACCTCGGCCGCTG
CCTGACCGAGGGCTTCGCCTACCAGGGCCAGGCGTCGGCCTACCACGAGGGCGAATCGCGGGGCGAGCCGAGCGGCCATC
TCCCGCTGCAGGCTTTCGTCGCCTTCGTGCAAAACCACGATCAGGTGGGGAACCGCGCCTTCGGCGAGCGCCTGACGCAA
CTCGCTCCGGAATCCGCGCTGCGCGCGGTCGCCGCCGTCCTGCTGCTCGCGCCGTCGGTGCCCATGCTGTTCATGGGCGA
GGAGTTCGGCGCGCGGACGCCGTTCCAGTTCTTCTGCGACTTCGGCGGCGAACTGCGGGACGCGGTGACGCAGGGACGGC
GGCGGGAGTTCCGCAAGTTCGCGCGCTTTGCCGACCCCGCCGCGCAAGCCGCGATACCCGACCCGAACCGGCCCGAGACG
TTTCTCGCGTCGCGGCTCGACTGGTCGGAGGCGGGCGCCGGCGCGCTCGACCAATACCGCGGCCTGCTGAAGCTGAGGCG
TGAAACGATCGTCCCGCGCCTGCGCCTGATCGAGCCCGGCTCGGCCGCATTCGAGGTCGTCGCGGGCGTCCTGCGCGTGC
GCTGGGGCTTGCACGACGGCGCCTCCCTGCAACTCACGGCCCATCTGTCGCAAGAGCCGCTCGGCGAGGTCGCGCTCGAA
GGCGAGGTCATTTTCGCCACCTCCGATGCGGCGGCGGCCGGCGTTCTCGGTCCCTGGTCGGTCGTATGGACGCTCGCGGC
CGCGGAGACCCAGGCATGA

Upstream 100 bases:

>100_bases
AACGCCGCGCCGTCGGCAGCGCTGCTGCAATGCGTCGGCTGGTTCAGGTGACACGCCGTTGATCGAAGGAGACATTTTGG
CGAACGCTCGACACCACGAA

Downstream 100 bases:

>100_bases
GCACGCTGCTCGATCAGGCCTGCGAACGCTGCGGGATACTGCCGGAGTACTACGACATATGGGGTGGGGCGCATCCGACC
AGCGAGGCGGCGAAGCGCGC

Product: alpha amylase domain-containing protein

Products: NA

Alternate protein names: MTHase; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; Maltooligosyl trehalose trehalohydrolase [H]

Number of amino acids: Translated: 592; Mature: 591

Protein sequence:

>592_residues
MPFGTRITPEGVRFRLWAPGCERVMLHIEEGAAVGRMMMPSGDGWFELLVDGAGAGTPYRFEVNDGLRVPDPASRFNPDD
VHGASVVVDPTAFAWRDTAWKGRPWEEAVVYELHVGTFSPSGTFAGVIERLDYLVDLGVTAIELMPVADFPGVHNWGYDG
VLLFAPDSRYGTPDDLKALVQSAHDKGLMVLLDVVYNHFGPEGNYLHVYARKFFSERHHTLWGAAINFDGSGSRTVRDFF
IHNALYWLQEYHFDGLRLDAVHAIIDDSARHILTELAERVHAEIGSERAVHLILENDANEAHHLGQGGYTAQWNDDIHHA
LHVLATGEADGYYGDYADAPLVHLGRCLTEGFAYQGQASAYHEGESRGEPSGHLPLQAFVAFVQNHDQVGNRAFGERLTQ
LAPESALRAVAAVLLLAPSVPMLFMGEEFGARTPFQFFCDFGGELRDAVTQGRRREFRKFARFADPAAQAAIPDPNRPET
FLASRLDWSEAGAGALDQYRGLLKLRRETIVPRLRLIEPGSAAFEVVAGVLRVRWGLHDGASLQLTAHLSQEPLGEVALE
GEVIFATSDAAAAGVLGPWSVVWTLAAAETQA

Sequences:

>Translated_592_residues
MPFGTRITPEGVRFRLWAPGCERVMLHIEEGAAVGRMMMPSGDGWFELLVDGAGAGTPYRFEVNDGLRVPDPASRFNPDD
VHGASVVVDPTAFAWRDTAWKGRPWEEAVVYELHVGTFSPSGTFAGVIERLDYLVDLGVTAIELMPVADFPGVHNWGYDG
VLLFAPDSRYGTPDDLKALVQSAHDKGLMVLLDVVYNHFGPEGNYLHVYARKFFSERHHTLWGAAINFDGSGSRTVRDFF
IHNALYWLQEYHFDGLRLDAVHAIIDDSARHILTELAERVHAEIGSERAVHLILENDANEAHHLGQGGYTAQWNDDIHHA
LHVLATGEADGYYGDYADAPLVHLGRCLTEGFAYQGQASAYHEGESRGEPSGHLPLQAFVAFVQNHDQVGNRAFGERLTQ
LAPESALRAVAAVLLLAPSVPMLFMGEEFGARTPFQFFCDFGGELRDAVTQGRRREFRKFARFADPAAQAAIPDPNRPET
FLASRLDWSEAGAGALDQYRGLLKLRRETIVPRLRLIEPGSAAFEVVAGVLRVRWGLHDGASLQLTAHLSQEPLGEVALE
GEVIFATSDAAAAGVLGPWSVVWTLAAAETQA
>Mature_591_residues
PFGTRITPEGVRFRLWAPGCERVMLHIEEGAAVGRMMMPSGDGWFELLVDGAGAGTPYRFEVNDGLRVPDPASRFNPDDV
HGASVVVDPTAFAWRDTAWKGRPWEEAVVYELHVGTFSPSGTFAGVIERLDYLVDLGVTAIELMPVADFPGVHNWGYDGV
LLFAPDSRYGTPDDLKALVQSAHDKGLMVLLDVVYNHFGPEGNYLHVYARKFFSERHHTLWGAAINFDGSGSRTVRDFFI
HNALYWLQEYHFDGLRLDAVHAIIDDSARHILTELAERVHAEIGSERAVHLILENDANEAHHLGQGGYTAQWNDDIHHAL
HVLATGEADGYYGDYADAPLVHLGRCLTEGFAYQGQASAYHEGESRGEPSGHLPLQAFVAFVQNHDQVGNRAFGERLTQL
APESALRAVAAVLLLAPSVPMLFMGEEFGARTPFQFFCDFGGELRDAVTQGRRREFRKFARFADPAAQAAIPDPNRPETF
LASRLDWSEAGAGALDQYRGLLKLRRETIVPRLRLIEPGSAAFEVVAGVLRVRWGLHDGASLQLTAHLSQEPLGEVALEG
EVIFATSDAAAAGVLGPWSVVWTLAAAETQA

Specific function: Catalyzes The Formation Of The Alpha-1,6-Glucosidic Linkages In Glycogen By Scission Of A 1,4-Alpha-Linked Oligosaccharide From Growing Alpha-1,4-Glucan Chains And The Subsequent Attachment Of The Oligosaccharide To The Alpha-1,6 Position. Has A Preferenc

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=172, Percent_Identity=34.3023255813954, Blast_Score=87, Evalue=6e-17,
Organism=Escherichia coli, GI1789839, Length=277, Percent_Identity=30.6859205776173, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI2367229, Length=336, Percent_Identity=27.0833333333333, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1790687, Length=123, Percent_Identity=36.5853658536585, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17554896, Length=172, Percent_Identity=36.6279069767442, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI32564391, Length=172, Percent_Identity=36.6279069767442, Blast_Score=93, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6320826, Length=176, Percent_Identity=31.8181818181818, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6322245, Length=146, Percent_Identity=31.5068493150685, Blast_Score=70, Evalue=7e-13,
Organism=Drosophila melanogaster, GI28573410, Length=172, Percent_Identity=30.8139534883721, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24586597, Length=107, Percent_Identity=37.3831775700935, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- InterPro:   IPR015156
- InterPro:   IPR012768 [H]

Pfam domain/function: PF09071 Alpha-amyl_C; PF00128 Alpha-amylase; PF02922 CBM_48 [H]

EC number: =3.2.1.141 [H]

Molecular weight: Translated: 65040; Mature: 64908

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFGTRITPEGVRFRLWAPGCERVMLHIEEGAAVGRMMMPSGDGWFELLVDGAGAGTPYR
CCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEECCCCCCEEEEEEECCCCCCCEE
FEVNDGLRVPDPASRFNPDDVHGASVVVDPTAFAWRDTAWKGRPWEEAVVYELHVGTFSP
EECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCEEEEEEEECCCCC
SGTFAGVIERLDYLVDLGVTAIELMPVADFPGVHNWGYDGVLLFAPDSRYGTPDDLKALV
CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHH
QSAHDKGLMVLLDVVYNHFGPEGNYLHVYARKFFSERHHTLWGAAINFDGSGSRTVRDFF
HHCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHH
IHNALYWLQEYHFDGLRLDAVHAIIDDSARHILTELAERVHAEIGSERAVHLILENDANE
HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCH
AHHLGQGGYTAQWNDDIHHALHVLATGEADGYYGDYADAPLVHLGRCLTEGFAYQGQASA
HHHCCCCCEEECCCCHHHHHEEHEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
YHEGESRGEPSGHLPLQAFVAFVQNHDQVGNRAFGERLTQLAPESALRAVAAVLLLAPSV
CCCCCCCCCCCCCCCHHHHHHHHHCHHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC
PMLFMGEEFGARTPFQFFCDFGGELRDAVTQGRRREFRKFARFADPAAQAAIPDPNRPET
CEEEECCHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHH
FLASRLDWSEAGAGALDQYRGLLKLRRETIVPRLRLIEPGSAAFEVVAGVLRVRWGLHDG
HHHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCC
ASLQLTAHLSQEPLGEVALEGEVIFATSDAAAAGVLGPWSVVWTLAAAETQA
CEEEEEEECCCCCCCCEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
PFGTRITPEGVRFRLWAPGCERVMLHIEEGAAVGRMMMPSGDGWFELLVDGAGAGTPYR
CCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEECCCCCCEEEEEEECCCCCCCEE
FEVNDGLRVPDPASRFNPDDVHGASVVVDPTAFAWRDTAWKGRPWEEAVVYELHVGTFSP
EECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCEEEEEEEECCCCC
SGTFAGVIERLDYLVDLGVTAIELMPVADFPGVHNWGYDGVLLFAPDSRYGTPDDLKALV
CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHH
QSAHDKGLMVLLDVVYNHFGPEGNYLHVYARKFFSERHHTLWGAAINFDGSGSRTVRDFF
HHCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHH
IHNALYWLQEYHFDGLRLDAVHAIIDDSARHILTELAERVHAEIGSERAVHLILENDANE
HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCH
AHHLGQGGYTAQWNDDIHHALHVLATGEADGYYGDYADAPLVHLGRCLTEGFAYQGQASA
HHHCCCCCEEECCCCHHHHHEEHEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
YHEGESRGEPSGHLPLQAFVAFVQNHDQVGNRAFGERLTQLAPESALRAVAAVLLLAPSV
CCCCCCCCCCCCCCCHHHHHHHHHCHHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC
PMLFMGEEFGARTPFQFFCDFGGELRDAVTQGRRREFRKFARFADPAAQAAIPDPNRPET
CEEEECCHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHH
FLASRLDWSEAGAGALDQYRGLLKLRRETIVPRLRLIEPGSAAFEVVAGVLRVRWGLHDG
HHHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCC
ASLQLTAHLSQEPLGEVALEGEVIFATSDAAAAGVLGPWSVVWTLAAAETQA
CEEEEEEECCCCCCCCEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726 [H]