The gene/protein map for NC_007404 is currently unavailable.
Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is pstS [H]

Identifier: 74317154

GI number: 74317154

Start: 1191858

End: 1192877

Strand: Direct

Name: pstS [H]

Synonym: Tbd_1136

Alternate gene names: 74317154

Gene position: 1191858-1192877 (Clockwise)

Preceding gene: 74317153

Following gene: 74317155

Centisome position: 40.96

GC content: 63.73

Gene sequence:

>1020_bases
ATGCTTACACTCAACGGACTGGCGCGCGCCGCCGCAGCCGTCTTCGCGAGCGTCGCCGTGGCGGCGAGCGCGATGGCAGC
GGACGTCACCGGCGCCGGCGCGACCTTCCCCTACGCCGTCTATACCAAGTGGGCCGAGGCCTATCGTGCGGCGACCGGCA
ACAAGGTCAATTACCAGGGCATCGGTTCTTCGGGCGGTGTGAAGCAGATCAAGGCGAAGACCGTCGATTTCGGCGGCACC
GACGCGCCGCTCAAGGACGCCGATCTCGATGCGGTGCGCCTCGTGCAGGTGCCTACCGTCATGGGTGGCGTGACGATCGT
TGCCAACGTCCCGGGAATCGACTCGGGCAAACTCAAACTCGACGGGGTGACGGCGGCGAACATCTTCCGCGGGGCGATCT
ACAAGTGGAACGATCCGGCAATCCGGAAACTGAACCCGGGCGTCGCATTGCCGAATCTGGCGATTACCGTCGCGCACCGT
TCCGACGGCTCGGGTACGACCTACGCCTTCACCCATTACCTCGCCAAGCAGTCGCCGCGTTTCAAAAGCGAGGTCGGGGC
GGGCAATACCGTGAACTGGCCGGCCAACGCAGTCGGGGGCAAGGGCAACCCCGGCGTGGCGGCCAACGTTCAGAAGATCA
AGGGCGCGATCGGGTATGTCGACATCGCCGACGCGATGAAGAACGGGATGCGTTTCGTCGCCCTGAAGAACCGCGCCGGG
AACTACATCGTCCCGAGCCAGCAGTCGGTCGCCGACGCCGCCGCCGGGGCCAACTTCAAGGTCAAGGGTATGGCTCCCGA
CCTGCTCGACCAGACGCACAAGAACGCCTGGCCGATCACCAGCGCGACCTATATCCTTGTCTATCAAAAAGGCGCCAGCG
CTGCTAAACAGAAGGGCGTGGTCGATTTCTTCCGGTGGTCGCTCAGAAACGGCCAGAAGATGGCGACCGACCTCGGTTTC
GTGCCCTTGCCGCCGAACGTCGTGCAAATGGTCGAAGCGGAGATGGGCAAGATCAAGTAA

Upstream 100 bases:

>100_bases
GCGAGCGATATCGCGGTCTGAAATATATCTGTAATATTCGGCCGCTAGTATGGCGCGGTTGCCCGCGCGGCGACGTCCAA
CTACTACGGAGATTCTTCAG

Downstream 100 bases:

>100_bases
GGCTAGAGGCCCTCGCGCAATGCGCCGCGAGGGTATCTACGCAAGCTGCTGTCGCCGGGCGGCTGCTTGCGTAGATAAAA
TTGATCCATAGGCATTCCAC

Product: periplasmic phosphate binding protein

Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]

Alternate protein names: PBP [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MLTLNGLARAAAAVFASVAVAASAMAADVTGAGATFPYAVYTKWAEAYRAATGNKVNYQGIGSSGGVKQIKAKTVDFGGT
DAPLKDADLDAVRLVQVPTVMGGVTIVANVPGIDSGKLKLDGVTAANIFRGAIYKWNDPAIRKLNPGVALPNLAITVAHR
SDGSGTTYAFTHYLAKQSPRFKSEVGAGNTVNWPANAVGGKGNPGVAANVQKIKGAIGYVDIADAMKNGMRFVALKNRAG
NYIVPSQQSVADAAAGANFKVKGMAPDLLDQTHKNAWPITSATYILVYQKGASAAKQKGVVDFFRWSLRNGQKMATDLGF
VPLPPNVVQMVEAEMGKIK

Sequences:

>Translated_339_residues
MLTLNGLARAAAAVFASVAVAASAMAADVTGAGATFPYAVYTKWAEAYRAATGNKVNYQGIGSSGGVKQIKAKTVDFGGT
DAPLKDADLDAVRLVQVPTVMGGVTIVANVPGIDSGKLKLDGVTAANIFRGAIYKWNDPAIRKLNPGVALPNLAITVAHR
SDGSGTTYAFTHYLAKQSPRFKSEVGAGNTVNWPANAVGGKGNPGVAANVQKIKGAIGYVDIADAMKNGMRFVALKNRAG
NYIVPSQQSVADAAAGANFKVKGMAPDLLDQTHKNAWPITSATYILVYQKGASAAKQKGVVDFFRWSLRNGQKMATDLGF
VPLPPNVVQMVEAEMGKIK
>Mature_339_residues
MLTLNGLARAAAAVFASVAVAASAMAADVTGAGATFPYAVYTKWAEAYRAATGNKVNYQGIGSSGGVKQIKAKTVDFGGT
DAPLKDADLDAVRLVQVPTVMGGVTIVANVPGIDSGKLKLDGVTAANIFRGAIYKWNDPAIRKLNPGVALPNLAITVAHR
SDGSGTTYAFTHYLAKQSPRFKSEVGAGNTVNWPANAVGGKGNPGVAANVQKIKGAIGYVDIADAMKNGMRFVALKNRAG
NYIVPSQQSVADAAAGANFKVKGMAPDLLDQTHKNAWPITSATYILVYQKGASAAKQKGVVDFFRWSLRNGQKMATDLGF
VPLPPNVVQMVEAEMGKIK

Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

Organism=Escherichia coli, GI2367271, Length=327, Percent_Identity=49.5412844036697, Blast_Score=308, Evalue=4e-85,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005673
- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 35344; Mature: 35344

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLNGLARAAAAVFASVAVAASAMAADVTGAGATFPYAVYTKWAEAYRAATGNKVNYQG
CEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
IGSSGGVKQIKAKTVDFGGTDAPLKDADLDAVRLVQVPTVMGGVTIVANVPGIDSGKLKL
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCHHHCCEEEEEECCCCCCCCEEE
DGVTAANIFRGAIYKWNDPAIRKLNPGVALPNLAITVAHRSDGSGTTYAFTHYLAKQSPR
CCCCHHHHHHCCEEECCCCCCEECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCC
FKSEVGAGNTVNWPANAVGGKGNPGVAANVQKIKGAIGYVDIADAMKNGMRFVALKNRAG
HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEHHHHHHCCEEEEEEECCCC
NYIVPSQQSVADAAAGANFKVKGMAPDLLDQTHKNAWPITSATYILVYQKGASAAKQKGV
CEECCCCHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHCCH
VDFFRWSLRNGQKMATDLGFVPLPPNVVQMVEAEMGKIK
HHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLTLNGLARAAAAVFASVAVAASAMAADVTGAGATFPYAVYTKWAEAYRAATGNKVNYQG
CEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
IGSSGGVKQIKAKTVDFGGTDAPLKDADLDAVRLVQVPTVMGGVTIVANVPGIDSGKLKL
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCHHHCCEEEEEECCCCCCCCEEE
DGVTAANIFRGAIYKWNDPAIRKLNPGVALPNLAITVAHRSDGSGTTYAFTHYLAKQSPR
CCCCHHHHHHCCEEECCCCCCEECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCC
FKSEVGAGNTVNWPANAVGGKGNPGVAANVQKIKGAIGYVDIADAMKNGMRFVALKNRAG
HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEHHHHHHCCEEEEEEECCCC
NYIVPSQQSVADAAAGANFKVKGMAPDLLDQTHKNAWPITSATYILVYQKGASAAKQKGV
CEECCCCHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHCCH
VDFFRWSLRNGQKMATDLGFVPLPPNVVQMVEAEMGKIK
HHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; phosphate [Periplasm]; H2O [C]

Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6321434; 6365894; 7686882; 9278503; 9298646; 2215649; 9228942; 9671506 [H]