| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is glmM
Identifier: 74317153
GI number: 74317153
Start: 1190402
End: 1191778
Strand: Direct
Name: glmM
Synonym: Tbd_1135
Alternate gene names: 74317153
Gene position: 1190402-1191778 (Clockwise)
Preceding gene: 74317152
Following gene: 74317154
Centisome position: 40.91
GC content: 67.03
Gene sequence:
>1377_bases ATGGGTCGTAAATACTTCGGTACCGACGGGGTCCGCGGCAAGGTCGGCGAAACGCCGATCACGCCCGAGTTCGTCATGCG TCTCGGCTACGCGGCCGGCAAGGTGTTGGTGTCCGACCGCGGGAGCTTGCCCGCGAACGAGCATCCGACCGTGCTGATCG GCAAGGACACGCGCATTTCCGGCTACATGCTCGAGGCGGCACTCGAAGCAGGCTTCACGGCGGCCGGCGTGAACGTTCTC ATGACCGGTCCGATGCCGACCCCCGCCGTCGCCTACCTGACGCGTGCGCTACGCCTGCAGGCTGGCGTCGTGATCTCCGC CTCGCACAATCCCTTCGAGGACAACGGCATCAAGTTCTTTTCGGCGAGCGGGCAGAAGCTCCCCGACAGCGTCGAGGAAG CGATCGAGGCTGCGCTCGACCAGCCGCTCGCGACCGTCGCGGCGCGCCAGCTCGGGCGCGCGCGGCGAATCGAGGATGCG GCCGCGCGCTACATCGAATTCTGCAAGAGCACCTTTCCCAACCGGCTCGACCTGCGCGGCATGCGCATCGTCGTCGACTG CGCGCACGGCGCGACCTACCACGTCGCCCCCCATGTGCTGCACGAACTCGGCGCGGAAGTCGTGGCCATTGGCAACGAGC CCAACGGCTTCAACATCAACGAAGCCTGCGGCGCGACGCATACGCCGGCGCTGGCCGACGCGGTTCGCGCGCATCACGCC GACATCGGGATATCGCTCGACGGTGACGGCGACCGCCTGATGATGGCCGATGCCCACGGCCGGATCTACGACGGCGACCA ACTCGTTTACGTGATCGCGCGCCACCGCCTCGAGACGGGCTACATGAAGGGCGGCGTGGTCGGCACGCTGATGACCAATC TGGGTACCGAGCATGCGCTCGCGCGCATTCACGTGCCCTTCGAGCGCGCGAAGGTGGGCGATCGCTACGTGCTCAAGCGT CTCCATGCCAACGGCTGGTTCCTCGGCGGTGAGACGTCGGGGCATATCCTCTGCCTCGACAAGCACACGACCGGTGACGG CATCGTCTCGAGCCTGCAGGTGCTGCGCGCGCTGCGCGAGACCGGCAAAACGCTCGACGCCTTCACCGCCGACCTGGAAA CCTATCCGCAGGTCATGATCAACGTGCCCGTCGTCAAGGGATTCAGGCTTAGTGACGCGGCGGCCGTCACCGTTGCCGTT GCCGATGCGGAGTCTGCGTTGAATGGCAGCGGTCGCATCGTGCTGCGTGCGTCCGGTACCGAACCGCTGATCCGGGTGAT GGTGGAGGGTCGCGACGGCGACCTCGTCCGCCGCACCGCCGAGATGATCGCGGACGCGGTACGAGCGGCCGCGGCGGCGA GCGATATCGCGGTCTGA
Upstream 100 bases:
>100_bases GCTGTGGCGCGGGGCGCGCGGATCGTTCGGGTACATAATGTCGCAGCCATGCGCGATGCGCTGGCGATCTGGAAAGCGGT TGAGGGGAGGAGTCGTCAAG
Downstream 100 bases:
>100_bases AATATATCTGTAATATTCGGCCGCTAGTATGGCGCGGTTGCCCGCGCGGCGACGTCCAACTACTACGGAGATTCTTCAGA TGCTTACACTCAACGGACTG
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MGRKYFGTDGVRGKVGETPITPEFVMRLGYAAGKVLVSDRGSLPANEHPTVLIGKDTRISGYMLEAALEAGFTAAGVNVL MTGPMPTPAVAYLTRALRLQAGVVISASHNPFEDNGIKFFSASGQKLPDSVEEAIEAALDQPLATVAARQLGRARRIEDA AARYIEFCKSTFPNRLDLRGMRIVVDCAHGATYHVAPHVLHELGAEVVAIGNEPNGFNINEACGATHTPALADAVRAHHA DIGISLDGDGDRLMMADAHGRIYDGDQLVYVIARHRLETGYMKGGVVGTLMTNLGTEHALARIHVPFERAKVGDRYVLKR LHANGWFLGGETSGHILCLDKHTTGDGIVSSLQVLRALRETGKTLDAFTADLETYPQVMINVPVVKGFRLSDAAAVTVAV ADAESALNGSGRIVLRASGTEPLIRVMVEGRDGDLVRRTAEMIADAVRAAAAASDIAV
Sequences:
>Translated_458_residues MGRKYFGTDGVRGKVGETPITPEFVMRLGYAAGKVLVSDRGSLPANEHPTVLIGKDTRISGYMLEAALEAGFTAAGVNVL MTGPMPTPAVAYLTRALRLQAGVVISASHNPFEDNGIKFFSASGQKLPDSVEEAIEAALDQPLATVAARQLGRARRIEDA AARYIEFCKSTFPNRLDLRGMRIVVDCAHGATYHVAPHVLHELGAEVVAIGNEPNGFNINEACGATHTPALADAVRAHHA DIGISLDGDGDRLMMADAHGRIYDGDQLVYVIARHRLETGYMKGGVVGTLMTNLGTEHALARIHVPFERAKVGDRYVLKR LHANGWFLGGETSGHILCLDKHTTGDGIVSSLQVLRALRETGKTLDAFTADLETYPQVMINVPVVKGFRLSDAAAVTVAV ADAESALNGSGRIVLRASGTEPLIRVMVEGRDGDLVRRTAEMIADAVRAAAAASDIAV >Mature_457_residues GRKYFGTDGVRGKVGETPITPEFVMRLGYAAGKVLVSDRGSLPANEHPTVLIGKDTRISGYMLEAALEAGFTAAGVNVLM TGPMPTPAVAYLTRALRLQAGVVISASHNPFEDNGIKFFSASGQKLPDSVEEAIEAALDQPLATVAARQLGRARRIEDAA ARYIEFCKSTFPNRLDLRGMRIVVDCAHGATYHVAPHVLHELGAEVVAIGNEPNGFNINEACGATHTPALADAVRAHHAD IGISLDGDGDRLMMADAHGRIYDGDQLVYVIARHRLETGYMKGGVVGTLMTNLGTEHALARIHVPFERAKVGDRYVLKRL HANGWFLGGETSGHILCLDKHTTGDGIVSSLQVLRALRETGKTLDAFTADLETYPQVMINVPVVKGFRLSDAAAVTVAVA DAESALNGSGRIVLRASGTEPLIRVMVEGRDGDLVRRTAEMIADAVRAAAAASDIAV
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=448, Percent_Identity=58.2589285714286, Blast_Score=501, Evalue=1e-143, Organism=Escherichia coli, GI1788361, Length=449, Percent_Identity=26.7260579064588, Blast_Score=104, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_THIDA (Q3SJR2)
Other databases:
- EMBL: CP000116 - RefSeq: YP_314893.1 - HSSP: O58651 - ProteinModelPortal: Q3SJR2 - SMR: Q3SJR2 - STRING: Q3SJR2 - GeneID: 3673206 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_1135 - NMPDR: fig|292415.3.peg.1134 - eggNOG: COG1109 - HOGENOM: HBG644964 - OMA: EEAGINS - PhylomeDB: Q3SJR2 - BioCyc: TDEN292415:TBD_1135-MONOMER - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 48744; Mature: 48613
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 108-108
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRKYFGTDGVRGKVGETPITPEFVMRLGYAAGKVLVSDRGSLPANEHPTVLIGKDTRIS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCCCC GYMLEAALEAGFTAAGVNVLMTGPMPTPAVAYLTRALRLQAGVVISASHNPFEDNGIKFF HHHHHHHHHCCCEECCCEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEE SASGQKLPDSVEEAIEAALDQPLATVAARQLGRARRIEDAAARYIEFCKSTFPNRLDLRG ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC MRIVVDCAHGATYHVAPHVLHELGAEVVAIGNEPNGFNINEACGATHTPALADAVRAHHA EEEEEEECCCCEEEHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCCCCHHHHHHHHHHHC DIGISLDGDGDRLMMADAHGRIYDGDQLVYVIARHRLETGYMKGGVVGTLMTNLGTEHAL CEEEEECCCCCEEEEEECCCCEECCCCEEEEEEHHHHHCCCCCCCHHHHHHHHCCCCCCE ARIHVPFERAKVGDRYVLKRLHANGWFLGGETSGHILCLDKHTTGDGIVSSLQVLRALRE EEEECCHHHHHCCHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH TGKTLDAFTADLETYPQVMINVPVVKGFRLSDAAAVTVAVADAESALNGSGRIVLRASGT CCCCHHHHHHHHHHCCEEEEECCEECCEEECCCCEEEEEEECHHHHCCCCCEEEEEECCC EPLIRVMVEGRDGDLVRRTAEMIADAVRAAAAASDIAV CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRKYFGTDGVRGKVGETPITPEFVMRLGYAAGKVLVSDRGSLPANEHPTVLIGKDTRIS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCCCC GYMLEAALEAGFTAAGVNVLMTGPMPTPAVAYLTRALRLQAGVVISASHNPFEDNGIKFF HHHHHHHHHCCCEECCCEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEE SASGQKLPDSVEEAIEAALDQPLATVAARQLGRARRIEDAAARYIEFCKSTFPNRLDLRG ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC MRIVVDCAHGATYHVAPHVLHELGAEVVAIGNEPNGFNINEACGATHTPALADAVRAHHA EEEEEEECCCCEEEHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCCCCHHHHHHHHHHHC DIGISLDGDGDRLMMADAHGRIYDGDQLVYVIARHRLETGYMKGGVVGTLMTNLGTEHAL CEEEEECCCCCEEEEEECCCCEECCCCEEEEEEHHHHHCCCCCCCHHHHHHHHCCCCCCE ARIHVPFERAKVGDRYVLKRLHANGWFLGGETSGHILCLDKHTTGDGIVSSLQVLRALRE EEEECCHHHHHCCHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH TGKTLDAFTADLETYPQVMINVPVVKGFRLSDAAAVTVAVADAESALNGSGRIVLRASGT CCCCHHHHHHHHHHCCEEEEECCEECCEEECCCCEEEEEEECHHHHCCCCCEEEEEECCC EPLIRVMVEGRDGDLVRRTAEMIADAVRAAAAASDIAV CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA