| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317137
Identifier: 74317137
GI number: 74317137
Start: 1175353
End: 1175859
Strand: Direct
Name: 74317137
Synonym: Tbd_1119
Alternate gene names: NA
Gene position: 1175353-1175859 (Clockwise)
Preceding gene: 74317136
Following gene: 74317138
Centisome position: 40.39
GC content: 64.89
Gene sequence:
>507_bases ATGCCGGGCATGAAAATCCTGCCCCTCCTGCTGCTCTGCCTGCCCGTCGCCGCGCACGCGGCCTGGGTCGACTTCGAAGG CGAGTTCGAAGAAGAAAAACCCTGGGTCGAGGTCGCGGCGCAATTGCCCACGTATCCGAAGGTCGAGAACCTGATTCCCT TCGACGTCTCGGCGGCGACGCGCAATCGCTTCTTTATCGACGCCGCATCAATCAGCGTCGGCAGCGACGGCGTCGTGCGC TACACGGTCGTCGTCGAGGCTGCCGGGGGCGCGAAGAACGTGTCCTACGAGGGCTTGCGCTGCGCTTCCGGCGAACGGCG GCTCTACGCCTACGGGCATCCCGACGGCAACTGGTCGAAGGCGCGCAACGCCGGCTGGGAGCCGGTCAAGTTCCGTTCGC TGCTGTCCTACCATAAGGCCTTGTTCGAGGATCATTTCTGTCCCGACGGCATCAGCGTTCGCGATGCCAAGCAAGCCGTG CAGAGCCTGCGTCGGGCGTCGCGGTGA
Upstream 100 bases:
>100_bases CGGAAGGCTGGTGCGGGCTCGCGCCGCGATCGCGGGCGATTGAAAAACGCCGCGCGGGCGGGCGATCTTTCTGCAGACAG CGCGCGGCCGAATCAATAAA
Downstream 100 bases:
>100_bases GCACGTCGGTCGTCCGCCACGCACGGCGCATCGTCGTCAAGGTCGGTTCCAGCCTGGTCACGGCGGACGGGCGCGGCCTC GACCACGCGGCGCTGTCGCG
Product: putative lipoprotein
Products: NA
Alternate protein names: Periplasmic Protein
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MPGMKILPLLLLCLPVAAHAAWVDFEGEFEEEKPWVEVAAQLPTYPKVENLIPFDVSAATRNRFFIDAASISVGSDGVVR YTVVVEAAGGAKNVSYEGLRCASGERRLYAYGHPDGNWSKARNAGWEPVKFRSLLSYHKALFEDHFCPDGISVRDAKQAV QSLRRASR
Sequences:
>Translated_168_residues MPGMKILPLLLLCLPVAAHAAWVDFEGEFEEEKPWVEVAAQLPTYPKVENLIPFDVSAATRNRFFIDAASISVGSDGVVR YTVVVEAAGGAKNVSYEGLRCASGERRLYAYGHPDGNWSKARNAGWEPVKFRSLLSYHKALFEDHFCPDGISVRDAKQAV QSLRRASR >Mature_167_residues PGMKILPLLLLCLPVAAHAAWVDFEGEFEEEKPWVEVAAQLPTYPKVENLIPFDVSAATRNRFFIDAASISVGSDGVVRY TVVVEAAGGAKNVSYEGLRCASGERRLYAYGHPDGNWSKARNAGWEPVKFRSLLSYHKALFEDHFCPDGISVRDAKQAVQ SLRRASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18597; Mature: 18466
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGMKILPLLLLCLPVAAHAAWVDFEGEFEEEKPWVEVAAQLPTYPKVENLIPFDVSAAT CCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC RNRFFIDAASISVGSDGVVRYTVVVEAAGGAKNVSYEGLRCASGERRLYAYGHPDGNWSK CCEEEEEECEEEECCCCEEEEEEEEEECCCCCCCCCCCEEECCCCCEEEEEECCCCCCHH ARNAGWEPVKFRSLLSYHKALFEDHFCPDGISVRDAKQAVQSLRRASR HCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PGMKILPLLLLCLPVAAHAAWVDFEGEFEEEKPWVEVAAQLPTYPKVENLIPFDVSAAT CCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC RNRFFIDAASISVGSDGVVRYTVVVEAAGGAKNVSYEGLRCASGERRLYAYGHPDGNWSK CCEEEEEECEEEECCCCEEEEEEEEEECCCCCCCCCCCEEECCCCCEEEEEECCCCCCHH ARNAGWEPVKFRSLLSYHKALFEDHFCPDGISVRDAKQAVQSLRRASR HCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA