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The map label for this gene is fliR [H]

Identifier: 74317115

GI number: 74317115

Start: 1156427

End: 1157176

Strand: Direct

Name: fliR [H]

Synonym: Tbd_1097

Alternate gene names: 74317115

Gene position: 1156427-1157176 (Clockwise)

Preceding gene: 74317114

Following gene: 74317116

Centisome position: 39.74

GC content: 74.67

Gene sequence:

>750_bases
GTGCCACTGACCGAAGCAGCGCTTGGTGCCTGGCTCTATGGCTTCGCCCGCCTTGCGGGGTGGACGCTGCTCGACCCGTT
GACCGGTCGCCTGCCAGTCGGCCTGCGCCTGCTGCTCGCGGCGGTGCTCGCGCTGGCGCTGATGCCGGGTCAGACGCTCG
CGGTGCCGCCGCCCTTTACCGCCGCCGGGCTGCTCGCGCTCGGCGTCGAGTTCGCGTGGGGCGCCGCGCTGGCCCTGTGC
GTGTGGCTCGTGTTCGCGGCGGCGGCCGCCGCCCTGACCTGGACCGGGCACACCGCGACGGCGGGTCTCATGACGTTGAC
GGCCGAGCAGGCCGCGCCGGCCGACGCCGCGTGGCGGGCGCTGGCGGGGTGGCTCGCCGCGATGGCCTTCCTCGGCGCGA
GCGGACACTTGCTCGTGGTCGACGCCCTGCGCGACAGCTTCACGGCGATGCCGCTCGCGGTCTTGCCCGAGGCCGCGGCA
TTGCGCGAGCTCGCCGAAGCCGGCGCCTGGCTCTTCGCGGCCGGGGTCCAACTGGCCTTGCCGCTGCTGGCGCTTGTGCT
GCTCGTGCAACTCGCATTCGCCCTCGTCGCGCGGACGACGCCGGGCCTCGACCTGTTCTCGGCGGGCCTCGGCATCGCGG
CTGCGGCTCTCGTGCTGGCGTGGATCTGGGCCGTGCCGCGGATCAGCCAGGGAATCGGCTCCGCCGTCGCGCAACTGGCG
ACCTGGATGGCCGCGCTCGCCGGGCGATGA

Upstream 100 bases:

>100_bases
TTCGCGCGGGGCGTGCTGACGGATTTCCCGAGCCTCCTCGAATGACGAGCTTGCCGCGGAAAGGTGTAGCGACCCGGCTT
GCGCCGAACCCGGGGCAGCG

Downstream 100 bases:

>100_bases
CGCCGGTCGCGTCACGCCCCGCGGCCAGATGGATTAGAATGTGGCGATTTATCACGGCTGTCGCCCCAAGGCGGCGCGGC
AGTCCCATAACAGCGGCGGA

Product: flagellar biosynthetic fliR transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MPLTEAALGAWLYGFARLAGWTLLDPLTGRLPVGLRLLLAAVLALALMPGQTLAVPPPFTAAGLLALGVEFAWGAALALC
VWLVFAAAAAALTWTGHTATAGLMTLTAEQAAPADAAWRALAGWLAAMAFLGASGHLLVVDALRDSFTAMPLAVLPEAAA
LRELAEAGAWLFAAGVQLALPLLALVLLVQLAFALVARTTPGLDLFSAGLGIAAAALVLAWIWAVPRISQGIGSAVAQLA
TWMAALAGR

Sequences:

>Translated_249_residues
MPLTEAALGAWLYGFARLAGWTLLDPLTGRLPVGLRLLLAAVLALALMPGQTLAVPPPFTAAGLLALGVEFAWGAALALC
VWLVFAAAAAALTWTGHTATAGLMTLTAEQAAPADAAWRALAGWLAAMAFLGASGHLLVVDALRDSFTAMPLAVLPEAAA
LRELAEAGAWLFAAGVQLALPLLALVLLVQLAFALVARTTPGLDLFSAGLGIAAAALVLAWIWAVPRISQGIGSAVAQLA
TWMAALAGR
>Mature_248_residues
PLTEAALGAWLYGFARLAGWTLLDPLTGRLPVGLRLLLAAVLALALMPGQTLAVPPPFTAAGLLALGVEFAWGAALALCV
WLVFAAAAAALTWTGHTATAGLMTLTAEQAAPADAAWRALAGWLAAMAFLGASGHLLVVDALRDSFTAMPLAVLPEAAAL
RELAEAGAWLFAAGVQLALPLLALVLLVQLAFALVARTTPGLDLFSAGLGIAAAALVLAWIWAVPRISQGIGSAVAQLAT
WMAALAGR

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 25327; Mature: 25196

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTEAALGAWLYGFARLAGWTLLDPLTGRLPVGLRLLLAAVLALALMPGQTLAVPPPFT
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCHH
AAGLLALGVEFAWGAALALCVWLVFAAAAAALTWTGHTATAGLMTLTAEQAAPADAAWRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHH
LAGWLAAMAFLGASGHLLVVDALRDSFTAMPLAVLPEAAALRELAEAGAWLFAAGVQLAL
HHHHHHHHHHHCCCCCEEEHHHHHHHHHHCHHHHCCHHHHHHHHHHHCHHHHHHHHHHHH
PLLALVLLVQLAFALVARTTPGLDLFSAGLGIAAAALVLAWIWAVPRISQGIGSAVAQLA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TWMAALAGR
HHHHHHHCC
>Mature Secondary Structure 
PLTEAALGAWLYGFARLAGWTLLDPLTGRLPVGLRLLLAAVLALALMPGQTLAVPPPFT
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCHH
AAGLLALGVEFAWGAALALCVWLVFAAAAAALTWTGHTATAGLMTLTAEQAAPADAAWRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHH
LAGWLAAMAFLGASGHLLVVDALRDSFTAMPLAVLPEAAALRELAEAGAWLFAAGVQLAL
HHHHHHHHHHHCCCCCEEEHHHHHHHHHHCHHHHCCHHHHHHHHHHHCHHHHHHHHHHHH
PLLALVLLVQLAFALVARTTPGLDLFSAGLGIAAAALVLAWIWAVPRISQGIGSAVAQLA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TWMAALAGR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412685; 7934865 [H]