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The map label for this gene is fliF [H]

Identifier: 74317106

GI number: 74317106

Start: 1149689

End: 1150834

Strand: Direct

Name: fliF [H]

Synonym: Tbd_1088

Alternate gene names: 74317106

Gene position: 1149689-1150834 (Clockwise)

Preceding gene: 74317105

Following gene: 74317107

Centisome position: 39.51

GC content: 72.51

Gene sequence:

>1146_bases
GTGCCGGCCGGGCTGAGCTTCCTGCGCGAGCTTGTCGCGGAGGCGAGCCCGTGGCGCCGCCTCACGCTCGCCCTGCTGAT
TCTCGTGCCGCTCGGCGCGCTTGCTGCCGCCTACATCTGGTTCAATCCCCCCGCTTATCGCGTGCTGTACGGGCAGTTGT
CCGATCGTGTCGGCGGCGAGGTGATTGGCGCGCTCGAACAGCTCGGCATTCCCTACCGCCTCTCCGCCGGCGACGGCCGC
ATCGAAGTGCCGGTCGACACTTTGCACGTCGCGCGCTATCGCCTTGCGGCGCTCGGGCTGCCGCGCTCGGACGCCGACGT
CGAGGCCGACGTCGAGCGGGCGCCGAGCTTCGGCCTGTCGTCGTTGCAGCAACAGCAACGCCAGCAGCGCGCGCTGGAAC
ACGAGCTTGCGCGCTCGATCCAGTCGCTCGAGGCGGTCGAGCTTGCGCGCGTCCATCTCGCGCTTCCCAAGGTCTCGCCC
TTCCTGCGTGACGCGCCGCGCGCCACCGCGGCGGTGCTGGTGCGTCTGCGCCCGCGTGCGCAACTGTCGACCGAGCAGGT
GACGACGATCCAGACGCTGGTCGCAGCCGCGGTGCCGCGCATGAAGCGCGCCGACGTCCAGGTGCTCGACCCGCGCGGCG
TCGTGCTCGGCGGCGCTGCGCCGGAAATCGAGCCCTCGCTGCGCGTGGCGCTCGAGCAGGATCTGGCGCGGCGCGCGCTC
GCCGTGCTGACGCCATGGCTCGGCGCGGAGCGCGTCAGCGTGCAGGTGACGGCGACCCTCGAGGACGCCACCACGCGCGA
GACCGTCGAGCGCATGCGCCGGGTAGCGGGCGAGGGACAGGCCCGGCCGCTCGAAAAGACGGTGCGTACGACGGTCGAGC
CCGAAGGCCGGATCCGCCGCATCGACGCAATCGTCATCCTCGCTTTCGACGCTGCGCCGGACGAGATCCGCAAGGCCGAC
GAATTGGCGCGGCAGGCGTTGGGCCTGCAGCCTGCGCGCGGCGACGCCCTGAACGTCTATGCACTGCCGCTCGCGCGCCG
CCACGGCCGGCGCCGCCGGTGGTCGAGAAGCCTGCAGCCTCGCCGGTGTCGCTCGCGCTGGTCGCGGCCCTGGCCGGCGC
GCTCGTCCTCGGCGGCTGGCAGTTAA

Upstream 100 bases:

>100_bases
CGCGCGAGCGGGCGCCGGACCCCGCCAGGCAGGGACGGACCCTGCGCGCGGCCCGGCCTGAACAGGCGACCCGCGCAGCG
ATGCGAGGAAGGTGCGAGCC

Downstream 100 bases:

>100_bases
GCCGGCGCAGGGTTCCGCCCGCGGCCGAGACAGCAGGCGAGGATTTCGACGCCGAGCTCGACGCCGCCCGGGCCGAAGTG
CTCGCCGACCCGCGCGTCGC

Product: flagellar biosynthesis/type III secretory pathway lipoprotein FliF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MPAGLSFLRELVAEASPWRRLTLALLILVPLGALAAAYIWFNPPAYRVLYGQLSDRVGGEVIGALEQLGIPYRLSAGDGR
IEVPVDTLHVARYRLAALGLPRSDADVEADVERAPSFGLSSLQQQQRQQRALEHELARSIQSLEAVELARVHLALPKVSP
FLRDAPRATAAVLVRLRPRAQLSTEQVTTIQTLVAAAVPRMKRADVQVLDPRGVVLGGAAPEIEPSLRVALEQDLARRAL
AVLTPWLGAERVSVQVTATLEDATTRETVERMRRVAGEGQARPLEKTVRTTVEPEGRIRRIDAIVILAFDAAPDEIRKAD
ELARQALGLQPARGDALNVYALPLARRHGRRRRWSRSLQPRRCRSRWSRPWPARSSSAAGS

Sequences:

>Translated_381_residues
MPAGLSFLRELVAEASPWRRLTLALLILVPLGALAAAYIWFNPPAYRVLYGQLSDRVGGEVIGALEQLGIPYRLSAGDGR
IEVPVDTLHVARYRLAALGLPRSDADVEADVERAPSFGLSSLQQQQRQQRALEHELARSIQSLEAVELARVHLALPKVSP
FLRDAPRATAAVLVRLRPRAQLSTEQVTTIQTLVAAAVPRMKRADVQVLDPRGVVLGGAAPEIEPSLRVALEQDLARRAL
AVLTPWLGAERVSVQVTATLEDATTRETVERMRRVAGEGQARPLEKTVRTTVEPEGRIRRIDAIVILAFDAAPDEIRKAD
ELARQALGLQPARGDALNVYALPLARRHGRRRRWSRSLQPRRCRSRWSRPWPARSSSAAGS
>Mature_380_residues
PAGLSFLRELVAEASPWRRLTLALLILVPLGALAAAYIWFNPPAYRVLYGQLSDRVGGEVIGALEQLGIPYRLSAGDGRI
EVPVDTLHVARYRLAALGLPRSDADVEADVERAPSFGLSSLQQQQRQQRALEHELARSIQSLEAVELARVHLALPKVSPF
LRDAPRATAAVLVRLRPRAQLSTEQVTTIQTLVAAAVPRMKRADVQVLDPRGVVLGGAAPEIEPSLRVALEQDLARRALA
VLTPWLGAERVSVQVTATLEDATTRETVERMRRVAGEGQARPLEKTVRTTVEPEGRIRRIDAIVILAFDAAPDEIRKADE
LARQALGLQPARGDALNVYALPLARRHGRRRRWSRSLQPRRCRSRWSRPWPARSSSAAGS

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=254, Percent_Identity=37.4015748031496, Blast_Score=151, Evalue=6e-38,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 41957; Mature: 41826

Theoretical pI: Translated: 11.43; Mature: 11.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAGLSFLRELVAEASPWRRLTLALLILVPLGALAAAYIWFNPPAYRVLYGQLSDRVGGE
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VIGALEQLGIPYRLSAGDGRIEVPVDTLHVARYRLAALGLPRSDADVEADVERAPSFGLS
HHHHHHHCCCCEEEECCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHH
SLQQQQRQQRALEHELARSIQSLEAVELARVHLALPKVSPFLRDAPRATAAVLVRLRPRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHCCCCC
QLSTEQVTTIQTLVAAAVPRMKRADVQVLDPRGVVLGGAAPEIEPSLRVALEQDLARRAL
CCCHHHHHHHHHHHHHHCCCHHCCCCEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHH
AVLTPWLGAERVSVQVTATLEDATTRETVERMRRVAGEGQARPLEKTVRTTVEPEGRIRR
HHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEE
IDAIVILAFDAAPDEIRKADELARQALGLQPARGDALNVYALPLARRHGRRRRWSRSLQP
EEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHCCHHHHHHCCCCH
RRCRSRWSRPWPARSSSAAGS
HHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PAGLSFLRELVAEASPWRRLTLALLILVPLGALAAAYIWFNPPAYRVLYGQLSDRVGGE
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VIGALEQLGIPYRLSAGDGRIEVPVDTLHVARYRLAALGLPRSDADVEADVERAPSFGLS
HHHHHHHCCCCEEEECCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHH
SLQQQQRQQRALEHELARSIQSLEAVELARVHLALPKVSPFLRDAPRATAAVLVRLRPRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHCCCCC
QLSTEQVTTIQTLVAAAVPRMKRADVQVLDPRGVVLGGAAPEIEPSLRVALEQDLARRAL
CCCHHHHHHHHHHHHHHCCCHHCCCCEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHH
AVLTPWLGAERVSVQVTATLEDATTRETVERMRRVAGEGQARPLEKTVRTTVEPEGRIRR
HHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEE
IDAIVILAFDAAPDEIRKADELARQALGLQPARGDALNVYALPLARRHGRRRRWSRSLQP
EEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHCCHHHHHHCCCCH
RRCRSRWSRPWPARSSSAAGS
HHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2544561; 11677609; 1551848 [H]