| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317080
Identifier: 74317080
GI number: 74317080
Start: 1124571
End: 1125044
Strand: Direct
Name: 74317080
Synonym: Tbd_1062
Alternate gene names: NA
Gene position: 1124571-1125044 (Clockwise)
Preceding gene: 74317074
Following gene: 74317097
Centisome position: 38.65
GC content: 65.61
Gene sequence:
>474_bases ATGCGACGGCGGCGCTTTGCACGAGGCACCGACCGCCGACCCAAGGAGGTGCTCATGACCTACACAAGCAGCGACAGACA GGTGATCGAACTCGAGCGCGGCTACTGGCAGGCGCTCAAGGACAAGGACATCGACGCCGTGCTGAGCATGACCGACGATC CCTGCATCGTCAGCGGTGCTCAGGGCGTCGCTGAGATCGACCACAAGACATTCGAGCAGATGATGCGATCCGCGCCGTGG ACGATCGACGCCTTCTCGCTCGGCGATGACGTACATGTACGCATGCTGAGCGAGGACGTCGCCGTCGTCGCCTACAAGGT CCACGAAGAACTTTCCGTCGAGGGCAAGCCGCTCACCCTCGATGCGGCCGATTCGTCGACCTGGGTGCGGCGCGGCGGCC GATGGCTCTGCGCCGCGCACAGCGAAGCACTCGCGGGCGATGCCTACGGGCGCGACCGGCGTTCGGCGGGCTGA
Upstream 100 bases:
>100_bases GCTTGTGAACGCGTGAAACACGCCTGTCATGGCCCGCCCGTGAAAGCGAAGGCACAAGGAAACATTCCACGCCCGGCGCG CTCAAAATAATTTGAAATGA
Downstream 100 bases:
>100_bases GGCGCAGGATCAGTGCCGGCGAGGCCGGCCATACAAGGCGCGCAATTCGTCCTTGGCGGCTTCGAGCCGAGCCCTTTGTT CGGCCGTGAGCTGGCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRRRRFARGTDRRPKEVLMTYTSSDRQVIELERGYWQALKDKDIDAVLSMTDDPCIVSGAQGVAEIDHKTFEQMMRSAPW TIDAFSLGDDVHVRMLSEDVAVVAYKVHEELSVEGKPLTLDAADSSTWVRRGGRWLCAAHSEALAGDAYGRDRRSAG
Sequences:
>Translated_157_residues MRRRRFARGTDRRPKEVLMTYTSSDRQVIELERGYWQALKDKDIDAVLSMTDDPCIVSGAQGVAEIDHKTFEQMMRSAPW TIDAFSLGDDVHVRMLSEDVAVVAYKVHEELSVEGKPLTLDAADSSTWVRRGGRWLCAAHSEALAGDAYGRDRRSAG >Mature_157_residues MRRRRFARGTDRRPKEVLMTYTSSDRQVIELERGYWQALKDKDIDAVLSMTDDPCIVSGAQGVAEIDHKTFEQMMRSAPW TIDAFSLGDDVHVRMLSEDVAVVAYKVHEELSVEGKPLTLDAADSSTWVRRGGRWLCAAHSEALAGDAYGRDRRSAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17646; Mature: 17646
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRRFARGTDRRPKEVLMTYTSSDRQVIELERGYWQALKDKDIDAVLSMTDDPCIVSGA CCCCCCCCCCCCCCHHEEEEECCCCCEEEEEHHHHHHHHCCCCCHHEEECCCCCEEEECC QGVAEIDHKTFEQMMRSAPWTIDAFSLGDDVHVRMLSEDVAVVAYKVHEELSVEGKPLTL CCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCEEEEEEHHHHHCCCCCCEEE DAADSSTWVRRGGRWLCAAHSEALAGDAYGRDRRSAG ECCCCCHHHHCCCCEEEEECCCHHCCCCCCCCCCCCC >Mature Secondary Structure MRRRRFARGTDRRPKEVLMTYTSSDRQVIELERGYWQALKDKDIDAVLSMTDDPCIVSGA CCCCCCCCCCCCCCHHEEEEECCCCCEEEEEHHHHHHHHCCCCCHHEEECCCCCEEEECC QGVAEIDHKTFEQMMRSAPWTIDAFSLGDDVHVRMLSEDVAVVAYKVHEELSVEGKPLTL CCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCEEEEEEHHHHHCCCCCCEEE DAADSSTWVRRGGRWLCAAHSEALAGDAYGRDRRSAG ECCCCCHHHHCCCCEEEEECCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA