| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is crcB
Identifier: 74317054
GI number: 74317054
Start: 1100754
End: 1101128
Strand: Direct
Name: crcB
Synonym: Tbd_1036
Alternate gene names: 74317054
Gene position: 1100754-1101128 (Clockwise)
Preceding gene: 74317053
Following gene: 74317055
Centisome position: 37.83
GC content: 66.93
Gene sequence:
>375_bases ATGACCGCCTTCCTCGCCGTCGGTTTCGGCGCCGCGGTCGGCGCGTGGCTGCGCTGGGGGCTCGGTCTGTGGCTCAATCC GGCGTATCCGGCGATGCCGCTCGGGACGCTGGCCGCGAACGTCATCGGTGGCTATTTCATCGGTCTCGTGCTCGCCTGGT TCGCAGAACATCCAGGGGTGCCGCCGGAGGCGCGGCTCTTCGTCATCACCGGCCTGCTCGGCGGGCTCACGACCTTCTCG ACGTTTTCCGCCGAGGTCGTCACCGCGCTCACCCGCGGCCTCTGGCTCACCGGCAGCCTGATCGCGTTCGCGCATCTGGC CGGGTCGTTCATCGCAACCGGCCTCGGTTTCTACTCGTTGAAATTCCTCAAATGA
Upstream 100 bases:
>100_bases GCAACTGCTCGACGAGATCATCCGCGACGCCATGTAAGCCGCGGGCCGCGCGGCTTCTCGGCTAGAATGCGCGCATGATC ACGTCTGCCGCGCGTTCGCG
Downstream 100 bases:
>100_bases ACGCGATCTGCCTGCAGGTGTTTGTCTCGGAAGCGAGCCGCCATCACGGCAGGCTGACCTATGAATGGCTGCTCGATACG GCGCAGGAACTCGGCGTCGC
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTAFLAVGFGAAVGAWLRWGLGLWLNPAYPAMPLGTLAANVIGGYFIGLVLAWFAEHPGVPPEARLFVITGLLGGLTTFS TFSAEVVTALTRGLWLTGSLIAFAHLAGSFIATGLGFYSLKFLK
Sequences:
>Translated_124_residues MTAFLAVGFGAAVGAWLRWGLGLWLNPAYPAMPLGTLAANVIGGYFIGLVLAWFAEHPGVPPEARLFVITGLLGGLTTFS TFSAEVVTALTRGLWLTGSLIAFAHLAGSFIATGLGFYSLKFLK >Mature_123_residues TAFLAVGFGAAVGAWLRWGLGLWLNPAYPAMPLGTLAANVIGGYFIGLVLAWFAEHPGVPPEARLFVITGLLGGLTTFST FSAEVVTALTRGLWLTGSLIAFAHLAGSFIATGLGFYSLKFLK
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
Organism=Escherichia coli, GI1786842, Length=114, Percent_Identity=46.4912280701754, Blast_Score=91, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_THIDA (Q3SK07)
Other databases:
- EMBL: CP000116 - RefSeq: YP_314794.1 - STRING: Q3SK07 - GeneID: 3671261 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_1036 - NMPDR: fig|292415.3.peg.892 - eggNOG: COG0239 - HOGENOM: HBG753179 - OMA: CGAWLRW - PhylomeDB: Q3SK07 - BioCyc: TDEN292415:TBD_1036-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 13006; Mature: 12874
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1edee90c)-; HASH(0x21299534)-; HASH(0x20828dcc)-; HASH(0x205465d8)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFLAVGFGAAVGAWLRWGLGLWLNPAYPAMPLGTLAANVIGGYFIGLVLAWFAEHPGV CCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PPEARLFVITGLLGGLTTFSTFSAEVVTALTRGLWLTGSLIAFAHLAGSFIATGLGFYSL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFLK EECH >Mature Secondary Structure TAFLAVGFGAAVGAWLRWGLGLWLNPAYPAMPLGTLAANVIGGYFIGLVLAWFAEHPGV CEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PPEARLFVITGLLGGLTTFSTFSAEVVTALTRGLWLTGSLIAFAHLAGSFIATGLGFYSL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFLK EECH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA