| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317040
Identifier: 74317040
GI number: 74317040
Start: 1090060
End: 1091220
Strand: Direct
Name: 74317040
Synonym: Tbd_1022
Alternate gene names: NA
Gene position: 1090060-1091220 (Clockwise)
Preceding gene: 74317033
Following gene: 74317042
Centisome position: 37.46
GC content: 70.11
Gene sequence:
>1161_bases ATGAACGCAACTCGACCTATCAGCGGCTACCGCGCCGATCAACTCGTCGCCCGCCTCGCCGAGGCGCGCGGGCGCCTGCA AAGCCTGATCGATCGCCTGCCGGAAAACAACGGCTGGCTCGGACCCAAGGCGCCGCACCTCAATCCGCCGCTGTGGGAAT ACGGGCACATCGTCTGGTTCCAGGAGCGCTGGTGTCTGCGCGAGGGCGCGGACGGCGGCCGGGCCGAAAGTCTTCTGCCC GGCGCCGACGCGCTCTACGACTCGTCGAGCGTCGCCCACGACACGCGCTGGGACCTCGCGCTGCCCGCGCCCGAGGCCGT CGACGCCTATGCGGCGCGCGTCGCCGACGCCGTGGCGGCGCGCCTTCACACCGCGCTCGACGACCGGCTCGCGTATTTCG CCGAACTGAGCCTCTATCACGAACTCATGCACGTCGAGGCGTGGTGGATGGCCTTCCAGAACCTCGGCTACGCGCCGCCG GCGTCGCTCGAACGCGTGGCGCGCACACCCTCGCGTCGCCTCGCGTTCGCCGGCGGCGAGATCGATCTCGGCAGCAGTGC CGACGCCGGCTTCATTTTCGACAACGAAAAGTGGCGTCATCCGGCGGCGTACGCCGCGTTCGACATCGACGCGTCGCCGG TCGGCGAAGCCGAGTTCGCCGAATTCGTCGACACCGGCGGCTACCAGCAGCGTGCGCTATGGACCGACGAGGGATGGCAG TGGCGCGCTGCGAATGGCGCGCAGCATCCCATGTACTGGCGGCCCGCGGACGGAACTTGGGAGGTCCGCCGCTTCGAGCG CTGGACGCCGCTCGCGGCGGACCTCGCGATGCTGCACGTCAACCGCTTCGAGGCCGAGGCCTACGCGGCATGGCGCGGGC GGGCGCTGCCGACCGCGGCGCAGTGGGTCCGCGCCGGGCAGTATCCGGGGTTTCGCTCGGGCGATGCCTGGGAGTGGCTG CGCGATCCGTTCACGCCGTATCCGGGCTTCGCACCCGACCCCTATCGCGACTACTCGCAGCCCTGGTTCGATACGCACTG GGAATTGCGCGGCGGCGGCCCGTTGACCGACGCCGCGCTCAAGCGACCCGGGTTTCGCAATTTCTATCTGCCGCACCGCC GCGATCCTTACGCCGGGTTTCGCACCGCGAGCGCCGAGTAG
Upstream 100 bases:
>100_bases GAGAACTGGGTGAGACGGATCGGAAGAGCGGTGGTGTCGTTCATGTTCGGGTCTGTGAGAAGTGGGCGCCGCACGCATGG GCTAAAGTGTTTTATACAAC
Downstream 100 bases:
>100_bases GCGACTAACCGCCGGTCATCGACATGAAGCGCACGAGCTTGTGCGGCGCCTCGCGGAATTCGTGGCGTTCGGGCTTGAGG TTGATTGCCTCGACGATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MNATRPISGYRADQLVARLAEARGRLQSLIDRLPENNGWLGPKAPHLNPPLWEYGHIVWFQERWCLREGADGGRAESLLP GADALYDSSSVAHDTRWDLALPAPEAVDAYAARVADAVAARLHTALDDRLAYFAELSLYHELMHVEAWWMAFQNLGYAPP ASLERVARTPSRRLAFAGGEIDLGSSADAGFIFDNEKWRHPAAYAAFDIDASPVGEAEFAEFVDTGGYQQRALWTDEGWQ WRAANGAQHPMYWRPADGTWEVRRFERWTPLAADLAMLHVNRFEAEAYAAWRGRALPTAAQWVRAGQYPGFRSGDAWEWL RDPFTPYPGFAPDPYRDYSQPWFDTHWELRGGGPLTDAALKRPGFRNFYLPHRRDPYAGFRTASAE
Sequences:
>Translated_386_residues MNATRPISGYRADQLVARLAEARGRLQSLIDRLPENNGWLGPKAPHLNPPLWEYGHIVWFQERWCLREGADGGRAESLLP GADALYDSSSVAHDTRWDLALPAPEAVDAYAARVADAVAARLHTALDDRLAYFAELSLYHELMHVEAWWMAFQNLGYAPP ASLERVARTPSRRLAFAGGEIDLGSSADAGFIFDNEKWRHPAAYAAFDIDASPVGEAEFAEFVDTGGYQQRALWTDEGWQ WRAANGAQHPMYWRPADGTWEVRRFERWTPLAADLAMLHVNRFEAEAYAAWRGRALPTAAQWVRAGQYPGFRSGDAWEWL RDPFTPYPGFAPDPYRDYSQPWFDTHWELRGGGPLTDAALKRPGFRNFYLPHRRDPYAGFRTASAE >Mature_386_residues MNATRPISGYRADQLVARLAEARGRLQSLIDRLPENNGWLGPKAPHLNPPLWEYGHIVWFQERWCLREGADGGRAESLLP GADALYDSSSVAHDTRWDLALPAPEAVDAYAARVADAVAARLHTALDDRLAYFAELSLYHELMHVEAWWMAFQNLGYAPP ASLERVARTPSRRLAFAGGEIDLGSSADAGFIFDNEKWRHPAAYAAFDIDASPVGEAEFAEFVDTGGYQQRALWTDEGWQ WRAANGAQHPMYWRPADGTWEVRRFERWTPLAADLAMLHVNRFEAEAYAAWRGRALPTAAQWVRAGQYPGFRSGDAWEWL RDPFTPYPGFAPDPYRDYSQPWFDTHWELRGGGPLTDAALKRPGFRNFYLPHRRDPYAGFRTASAE
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43681; Mature: 43681
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATRPISGYRADQLVARLAEARGRLQSLIDRLPENNGWLGPKAPHLNPPLWEYGHIVWF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCEEEE QERWCLREGADGGRAESLLPGADALYDSSSVAHDTRWDLALPAPEAVDAYAARVADAVAA CCHHHHHCCCCCCCHHHCCCCCHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHH RLHTALDDRLAYFAELSLYHELMHVEAWWMAFQNLGYAPPASLERVARTPSRRLAFAGGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECCC IDLGSSADAGFIFDNEKWRHPAAYAAFDIDASPVGEAEFAEFVDTGGYQQRALWTDEGWQ EECCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCEEECCCCCE WRAANGAQHPMYWRPADGTWEVRRFERWTPLAADLAMLHVNRFEAEAYAAWRGRALPTAA EEECCCCCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QWVRAGQYPGFRSGDAWEWLRDPFTPYPGFAPDPYRDYSQPWFDTHWELRGGGPLTDAAL HHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHH KRPGFRNFYLPHRRDPYAGFRTASAE CCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNATRPISGYRADQLVARLAEARGRLQSLIDRLPENNGWLGPKAPHLNPPLWEYGHIVWF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCEEEE QERWCLREGADGGRAESLLPGADALYDSSSVAHDTRWDLALPAPEAVDAYAARVADAVAA CCHHHHHCCCCCCCHHHCCCCCHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHH RLHTALDDRLAYFAELSLYHELMHVEAWWMAFQNLGYAPPASLERVARTPSRRLAFAGGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECCC IDLGSSADAGFIFDNEKWRHPAAYAAFDIDASPVGEAEFAEFVDTGGYQQRALWTDEGWQ EECCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCEEECCCCCE WRAANGAQHPMYWRPADGTWEVRRFERWTPLAADLAMLHVNRFEAEAYAAWRGRALPTAA EEECCCCCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QWVRAGQYPGFRSGDAWEWLRDPFTPYPGFAPDPYRDYSQPWFDTHWELRGGGPLTDAAL HHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHH KRPGFRNFYLPHRRDPYAGFRTASAE CCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA