Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317002

Identifier: 74317002

GI number: 74317002

Start: 1048293

End: 1049057

Strand: Direct

Name: 74317002

Synonym: Tbd_0984

Alternate gene names: NA

Gene position: 1048293-1049057 (Clockwise)

Preceding gene: 74317001

Following gene: 74317011

Centisome position: 36.03

GC content: 65.23

Gene sequence:

>765_bases
ATGAAACTCACCGTATTGGGCTGCAGCGGCGGGATCGGCAGCGGCCGCCACACGACCGGCCTGCTCGTCGACGACGACAT
CCTGATCGACGCCGGCACGGGCATCACGACGCTCGACTTCGAGCAATTGCAGGCGATCGACCACGTGTTCCTGACCCACG
CGCACCTCGATCATGTGCTCGGCCTGCCACTCCTGCTCGACAGCGTCGGCGACCTGCGCGAGGCCCCGCTCATCGTGCAC
GCGCTGCCCGAAGTCCTGCAGGTGCTGTCGGATCATCTGTTCAACTGGCAGCTGTGGCCGGACTTCCGGAAAATTCCGAG
CGAGGACGCGCCGTGGCTGCGTTTCGAACCGCTCGGATTCGGCGAGGTCTGCACCGTCGACGGGCGCAGCTTCCGGCCGC
TGCCCGCGAACCATGTCGTCCCCGCCTGCGGCCTGCACGTTTTTGCGGAAGCCGGCGGAATCGTCTTCAGCGGCGACACG
ACCCATAGCGAGGCATTCGTCGCCGCGCTCAACGCGATTCCCGACCTGCGCCACCTCATCATCGAGACCTCGTTCGAGAA
TGCACTGGCCGCCATCGCCGAGGTGTCGAAGCATCACTGGCCCGATTCGCTGGCAGCGGAATTGAACGGGGTCAAGATCG
CGCCAGCGGTCTGGATCACCCATCTCAAGCCCGGCAACGAGTCGGCGATCATGAACGAGTTGCGCGAGGCCGCGCCCGCG
TGGCGAATCGAAGCCCTGATGCAGGGGCAGGTGATCGAAATCTGA

Upstream 100 bases:

>100_bases
GCGCGTTGTACGATGTCTATCTTGAGCGCATCGCGCAGTTCCGCGCCGCGCCTCCGCCGCAAGGCTGGGACGGCGTCTAC
GTCTACACAACGAAATAACG

Downstream 100 bases:

>100_bases
TCCGTTCGGCGCGCGTGCGCCGCTTCACACCGCAAAAAGCGCCAACTCGTCGGCGAAGCCGGCCGCGCTGAAACCTTCGT
AATCCTCACGGCTGAAGCGC

Product: cyclic-AMP phosphodiesterase

Products: NA

Alternate protein names: Cyclic-AMP Phosphodiesterase; Metal Dependent Phosphohydrolase; CAMP Phosphodiesterase; Beta-Lactamase Domain-Containing Protein; 3 5'-Cyclic-Nucleotide Phosphodiesterase; CAMP Phosphodiesterase Class-II; Beta-Lactamase-Like; Camp Phosphodiesterases Class-Ii; Response Regulator; Cyclic-AMP Phosphodiesterase Class-II; CAMP Phosphodiesterase-Like Protein; GAF Domain Protein; Beta-Lactamase-Like Protein; CAMP Phosphodiesterases Class-II; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Superfamily Metal-Dependent Hydrolase

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKLTVLGCSGGIGSGRHTTGLLVDDDILIDAGTGITTLDFEQLQAIDHVFLTHAHLDHVLGLPLLLDSVGDLREAPLIVH
ALPEVLQVLSDHLFNWQLWPDFRKIPSEDAPWLRFEPLGFGEVCTVDGRSFRPLPANHVVPACGLHVFAEAGGIVFSGDT
THSEAFVAALNAIPDLRHLIIETSFENALAAIAEVSKHHWPDSLAAELNGVKIAPAVWITHLKPGNESAIMNELREAAPA
WRIEALMQGQVIEI

Sequences:

>Translated_254_residues
MKLTVLGCSGGIGSGRHTTGLLVDDDILIDAGTGITTLDFEQLQAIDHVFLTHAHLDHVLGLPLLLDSVGDLREAPLIVH
ALPEVLQVLSDHLFNWQLWPDFRKIPSEDAPWLRFEPLGFGEVCTVDGRSFRPLPANHVVPACGLHVFAEAGGIVFSGDT
THSEAFVAALNAIPDLRHLIIETSFENALAAIAEVSKHHWPDSLAAELNGVKIAPAVWITHLKPGNESAIMNELREAAPA
WRIEALMQGQVIEI
>Mature_254_residues
MKLTVLGCSGGIGSGRHTTGLLVDDDILIDAGTGITTLDFEQLQAIDHVFLTHAHLDHVLGLPLLLDSVGDLREAPLIVH
ALPEVLQVLSDHLFNWQLWPDFRKIPSEDAPWLRFEPLGFGEVCTVDGRSFRPLPANHVVPACGLHVFAEAGGIVFSGDT
THSEAFVAALNAIPDLRHLIIETSFENALAAIAEVSKHHWPDSLAAELNGVKIAPAVWITHLKPGNESAIMNELREAAPA
WRIEALMQGQVIEI

Specific function: Unknown

COG id: COG1234

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27571; Mature: 27571

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTVLGCSGGIGSGRHTTGLLVDDDILIDAGTGITTLDFEQLQAIDHVFLTHAHLDHVL
CEEEEEECCCCCCCCCCCEEEEEECCEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHH
GLPLLLDSVGDLREAPLIVHALPEVLQVLSDHLFNWQLWPDFRKIPSEDAPWLRFEPLGF
HHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCEECCHHHHCCCCCCCEEEEECCCC
GEVCTVDGRSFRPLPANHVVPACGLHVFAEAGGIVFSGDTTHSEAFVAALNAIPDLRHLI
CCEEEECCCCCCCCCCCCCCCHHHHHHEECCCCEEEECCCCCHHHHHHHHHHCHHHHHHH
IETSFENALAAIAEVSKHHWPDSLAAELNGVKIAPAVWITHLKPGNESAIMNELREAAPA
HHCCHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEHEEEEEECCCCCHHHHHHHHHHHCCH
WRIEALMQGQVIEI
HHHHHHHCCCEECC
>Mature Secondary Structure
MKLTVLGCSGGIGSGRHTTGLLVDDDILIDAGTGITTLDFEQLQAIDHVFLTHAHLDHVL
CEEEEEECCCCCCCCCCCEEEEEECCEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHH
GLPLLLDSVGDLREAPLIVHALPEVLQVLSDHLFNWQLWPDFRKIPSEDAPWLRFEPLGF
HHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCEECCHHHHCCCCCCCEEEEECCCC
GEVCTVDGRSFRPLPANHVVPACGLHVFAEAGGIVFSGDTTHSEAFVAALNAIPDLRHLI
CCEEEECCCCCCCCCCCCCCCHHHHHHEECCCCEEEECCCCCHHHHHHHHHHCHHHHHHH
IETSFENALAAIAEVSKHHWPDSLAAELNGVKIAPAVWITHLKPGNESAIMNELREAAPA
HHCCHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEHEEEEEECCCCCHHHHHHHHHHHCCH
WRIEALMQGQVIEI
HHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA