| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is cyaA [H]
Identifier: 74317001
GI number: 74317001
Start: 1046077
End: 1048290
Strand: Direct
Name: cyaA [H]
Synonym: Tbd_0983
Alternate gene names: 74317001
Gene position: 1046077-1048290 (Clockwise)
Preceding gene: 74317000
Following gene: 74317002
Centisome position: 35.95
GC content: 69.29
Gene sequence:
>2214_bases GTGACGCGGGTCTCGTCGAGGCTGCTTCAGGCGGGGCTGTCGGCGCTGTTCGTGCTGCTGATCGCGGCGCACGTCGGCGG CGCGCTCCATTTCGATCCGATCGAGCGCGTCGAGGCTTGGCTTTACGACGCGTGGCTCAAGCGCACCGCGCCGACCGGGG CGGACGATCGCATCGCGATTCTCGACATCGACGAGGCGAGCCTGAAGAGCGTGGGCCGCTGGCCATGGAGCCGGGACACG ATGACCGCGCTGGTCGAGCGCCTGTTCGACCATTACGGCGTCGCAGCGGTCGGCTTCGACGTCGTCTTCGCCGAAGCCGA CCGCAGTTCCGGGCTCGATACCTTGAAGGCGCTCTCGCAGGGCGAGCTCGCAGGCGAGCGCGCGTTCGCTGCGGCGCTGC AGAAGATCGCGCCGCGCCTCGACTACGACGCGCGGTTTGCCGAGGCGCTCGCGGAGCGGCCGGTGTCGCTCGGCTATTAC TTCGTCCCCGAGGGATACCGTGCGACGCGCACCGGTACGTTGCCCCCGTGGTCCCTGCCGCCCGAGGTGTTCGGCGCGCT GAAGCCGGGCAGGCCGGCGGCCGGGTATGGCGCCAATCTCGCGCCCTTCCAGGACGCGGCACAGGGTGCGGGCTTCTTCA ACATGCTCGCCGACGACGACGGCACGGCCCGGCAGATGTCGCTCGTTCTCCCTTACGGCGAGGGCTATTACCTTGCGCTC TCGGCGTCGACCCTGCGCATCGCGTTCGGGGGCGACGCCGCGAGCGCCGGGGTCGAGCAAAGCGAACTGCTCGGGCGCAA CTACCTCGCGCCGTGGCTCGAGGTCGGCGGCATTCGCGTGCCGCTCGGCGCCGACGGCACCGTGCACGTGCCCTACCGGG CGGGCTCGCCGTTTCCCTACATCTCGGCGGCCGACGTGCTGGCTGGCAAAGCGCCGGTCGGGCAACTCGAGAATCGCATC GTGCTCGTCGGCTCGACCGCGCCGGGGCTCGCCGATCTGCGCGTCACCCCGTTCTCCAGCACCTTTCCGGGCGTGGAGAT CCACGCCCACCTGATCGCGGGCATGCTCGACGGCACGACGCGGGTGACGCCGCCGTGGGCGCGCGACGCGAGGCTGGCGG CGGTATTGCTGCTGGGCGCCGTGCTGATCGTGGTGCTGCTGCGCTTCGGCCCGGCGCTCGGCCTCGCCGCGACGCTCGCG TTGCTCGGCCTTCTGCTCGCCGCCTACGGCGCCGCGTGGGCGCGCTTCCAGGTGGTGCCGATGGCGGCGCCGATGCTCGC GGTGGCGGGGCTGTATGCGCTCAACACCGCGTACGGCCTTTTCGCCGCGACGCGCAGCAAGCGCCAGATCACGCGGCTCT TCGGCCAATACGTGCCACCCGAACTCGCCGCCGAGATGAGCCGCGATCCCGCGCACTACACGATGGAAGGGCAGTCGCGC GACATGAGCGTCCTGTTCTCCGACATTCGCGGCTTCACCAATTTTTCCGAAAAGCTGAGCCCGACCGAGCTTTCCGAGGT GCTCAACGCCTATCTTTCGACGATGACGCGCATCGTGCAGCAGCATCAGGGCACGATCGACAAGTACATCGGCGACGCCA TCATGGCGTTCTGGAATGCGCCGGTCGATCTCGCGGACCATGCCGCGCGCGCGGTCCGCACAGCGCTCGAGATGCAGGCG GCGCTGCCGCAGCTCAACGACGAGTTCGCCGCGCGCGGCTGGCCGGCGGTGAAGATCGGCGTCGGCGTCAACACCGGGCG CATGAGCGTGGGCAACATGGGCTCGGAATTCCGCATGGCCTACACCGTGATGGGGGACGCGGTGAACCTCGGATCGCGCC TCGAGGGCATCACCAAGCAGTACGGCGTCGGCATCCTCGTCACCCAGTCGACGGTCGACGCCGACCCGGTTCACGCCTAC ATGAAGGTCGACGAAGTCCGCGTCAAGGGCAAGGAGACGCCGGTCGCGATCTATGAGCCGCTCGGGGCAAAAGACCGCCT CGCCGACGACGTGCGCAGCGCCGCCGCCGCCTTCGACGCCGCCTTCGCCGCGTATCAGAAGCAGGACTGGGACGCTGCCG AGACGGCCCTGCGCGCGCTTGACGCGAAGTCGCCGCGCGCGTTGTACGATGTCTATCTTGAGCGCATCGCGCAGTTCCGC GCCGCGCCTCCGCCGCAAGGCTGGGACGGCGTCTACGTCTACACAACGAAATAA
Upstream 100 bases:
>100_bases CGCACCCGGCCGACCGGCTGGCGGCGTTGGGCGAGGCGGTCGATGGCCGCCTCGACGCCGTGCAGGGCAAGACGCTCGCC GACCGCTTCTACCGCATCAA
Downstream 100 bases:
>100_bases CGATGAAACTCACCGTATTGGGCTGCAGCGGCGGGATCGGCAGCGGCCGCCACACGACCGGCCTGCTCGTCGACGACGAC ATCCTGATCGACGCCGGCAC
Product: adenylyl cyclase class-3/4/guanylyl cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 1; Adenylyl cyclase 1; AC 1 [H]
Number of amino acids: Translated: 737; Mature: 736
Protein sequence:
>737_residues MTRVSSRLLQAGLSALFVLLIAAHVGGALHFDPIERVEAWLYDAWLKRTAPTGADDRIAILDIDEASLKSVGRWPWSRDT MTALVERLFDHYGVAAVGFDVVFAEADRSSGLDTLKALSQGELAGERAFAAALQKIAPRLDYDARFAEALAERPVSLGYY FVPEGYRATRTGTLPPWSLPPEVFGALKPGRPAAGYGANLAPFQDAAQGAGFFNMLADDDGTARQMSLVLPYGEGYYLAL SASTLRIAFGGDAASAGVEQSELLGRNYLAPWLEVGGIRVPLGADGTVHVPYRAGSPFPYISAADVLAGKAPVGQLENRI VLVGSTAPGLADLRVTPFSSTFPGVEIHAHLIAGMLDGTTRVTPPWARDARLAAVLLLGAVLIVVLLRFGPALGLAATLA LLGLLLAAYGAAWARFQVVPMAAPMLAVAGLYALNTAYGLFAATRSKRQITRLFGQYVPPELAAEMSRDPAHYTMEGQSR DMSVLFSDIRGFTNFSEKLSPTELSEVLNAYLSTMTRIVQQHQGTIDKYIGDAIMAFWNAPVDLADHAARAVRTALEMQA ALPQLNDEFAARGWPAVKIGVGVNTGRMSVGNMGSEFRMAYTVMGDAVNLGSRLEGITKQYGVGILVTQSTVDADPVHAY MKVDEVRVKGKETPVAIYEPLGAKDRLADDVRSAAAAFDAAFAAYQKQDWDAAETALRALDAKSPRALYDVYLERIAQFR AAPPPQGWDGVYVYTTK
Sequences:
>Translated_737_residues MTRVSSRLLQAGLSALFVLLIAAHVGGALHFDPIERVEAWLYDAWLKRTAPTGADDRIAILDIDEASLKSVGRWPWSRDT MTALVERLFDHYGVAAVGFDVVFAEADRSSGLDTLKALSQGELAGERAFAAALQKIAPRLDYDARFAEALAERPVSLGYY FVPEGYRATRTGTLPPWSLPPEVFGALKPGRPAAGYGANLAPFQDAAQGAGFFNMLADDDGTARQMSLVLPYGEGYYLAL SASTLRIAFGGDAASAGVEQSELLGRNYLAPWLEVGGIRVPLGADGTVHVPYRAGSPFPYISAADVLAGKAPVGQLENRI VLVGSTAPGLADLRVTPFSSTFPGVEIHAHLIAGMLDGTTRVTPPWARDARLAAVLLLGAVLIVVLLRFGPALGLAATLA LLGLLLAAYGAAWARFQVVPMAAPMLAVAGLYALNTAYGLFAATRSKRQITRLFGQYVPPELAAEMSRDPAHYTMEGQSR DMSVLFSDIRGFTNFSEKLSPTELSEVLNAYLSTMTRIVQQHQGTIDKYIGDAIMAFWNAPVDLADHAARAVRTALEMQA ALPQLNDEFAARGWPAVKIGVGVNTGRMSVGNMGSEFRMAYTVMGDAVNLGSRLEGITKQYGVGILVTQSTVDADPVHAY MKVDEVRVKGKETPVAIYEPLGAKDRLADDVRSAAAAFDAAFAAYQKQDWDAAETALRALDAKSPRALYDVYLERIAQFR AAPPPQGWDGVYVYTTK >Mature_736_residues TRVSSRLLQAGLSALFVLLIAAHVGGALHFDPIERVEAWLYDAWLKRTAPTGADDRIAILDIDEASLKSVGRWPWSRDTM TALVERLFDHYGVAAVGFDVVFAEADRSSGLDTLKALSQGELAGERAFAAALQKIAPRLDYDARFAEALAERPVSLGYYF VPEGYRATRTGTLPPWSLPPEVFGALKPGRPAAGYGANLAPFQDAAQGAGFFNMLADDDGTARQMSLVLPYGEGYYLALS ASTLRIAFGGDAASAGVEQSELLGRNYLAPWLEVGGIRVPLGADGTVHVPYRAGSPFPYISAADVLAGKAPVGQLENRIV LVGSTAPGLADLRVTPFSSTFPGVEIHAHLIAGMLDGTTRVTPPWARDARLAAVLLLGAVLIVVLLRFGPALGLAATLAL LGLLLAAYGAAWARFQVVPMAAPMLAVAGLYALNTAYGLFAATRSKRQITRLFGQYVPPELAAEMSRDPAHYTMEGQSRD MSVLFSDIRGFTNFSEKLSPTELSEVLNAYLSTMTRIVQQHQGTIDKYIGDAIMAFWNAPVDLADHAARAVRTALEMQAA LPQLNDEFAARGWPAVKIGVGVNTGRMSVGNMGSEFRMAYTVMGDAVNLGSRLEGITKQYGVGILVTQSTVDADPVHAYM KVDEVRVKGKETPVAIYEPLGAKDRLADDVRSAAAAFDAAFAAYQKQDWDAAETALRALDAKSPRALYDVYLERIAQFRA APPPQGWDGVYVYTTK
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate cyclase domain [H]
Homologues:
Organism=Homo sapiens, GI115387102, Length=216, Percent_Identity=27.3148148148148, Blast_Score=72, Evalue=3e-12, Organism=Homo sapiens, GI24497587, Length=161, Percent_Identity=31.055900621118, Blast_Score=71, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71989805, Length=211, Percent_Identity=27.9620853080569, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71989822, Length=211, Percent_Identity=27.9620853080569, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI62484477, Length=208, Percent_Identity=30.2884615384615, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI62484298, Length=208, Percent_Identity=30.2884615384615, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI116008008, Length=208, Percent_Identity=30.2884615384615, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI281366320, Length=347, Percent_Identity=23.9193083573487, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI161084260, Length=347, Percent_Identity=23.9193083573487, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI161078020, Length=210, Percent_Identity=25.2380952380952, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI85725044, Length=208, Percent_Identity=27.8846153846154, Blast_Score=67, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 [H]
Pfam domain/function: PF00211 Guanylate_cyc [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 79099; Mature: 78968
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVSSRLLQAGLSALFVLLIAAHVGGALHFDPIERVEAWLYDAWLKRTAPTGADDRIAI CCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEE LDIDEASLKSVGRWPWSRDTMTALVERLFDHYGVAAVGFDVVFAEADRSSGLDTLKALSQ EECCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHEEEEEECCCCCCHHHHHHHHH GELAGERAFAAALQKIAPRLDYDARFAEALAERPVSLGYYFVPEGYRATRTGTLPPWSLP CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCCEECCCCCCCCCCCC PEVFGALKPGRPAAGYGANLAPFQDAAQGAGFFNMLADDDGTARQMSLVLPYGEGYYLAL HHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCCEEEEE SASTLRIAFGGDAASAGVEQSELLGRNYLAPWLEVGGIRVPLGADGTVHVPYRAGSPFPY ECCEEEEEECCCHHHCCCCHHHHHCCCCCCHHHHHCCEEEECCCCCEEEEEECCCCCCCC ISAADVLAGKAPVGQLENRIVLVGSTAPGLADLRVTPFSSTFPGVEIHAHLIAGMLDGTT CCHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCC RVTPPWARDARLAAVLLLGAVLIVVLLRFGPALGLAATLALLGLLLAAYGAAWARFQVVP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEH MAAPMLAVAGLYALNTAYGLFAATRSKRQITRLFGQYVPPELAAEMSRDPAHYTMEGQSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCC DMSVLFSDIRGFTNFSEKLSPTELSEVLNAYLSTMTRIVQQHQGTIDKYIGDAIMAFWNA HHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC PVDLADHAARAVRTALEMQAALPQLNDEFAARGWPAVKIGVGVNTGRMSVGNMGSEFRMA CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEE YTVMGDAVNLGSRLEGITKQYGVGILVTQSTVDADPVHAYMKVDEVRVKGKETPVAIYEP EEECCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHEECCCCCCEEEECC LGAKDRLADDVRSAAAAFDAAFAAYQKQDWDAAETALRALDAKSPRALYDVYLERIAQFR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHC AAPPPQGWDGVYVYTTK CCCCCCCCCCEEEEECC >Mature Secondary Structure TRVSSRLLQAGLSALFVLLIAAHVGGALHFDPIERVEAWLYDAWLKRTAPTGADDRIAI CHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEE LDIDEASLKSVGRWPWSRDTMTALVERLFDHYGVAAVGFDVVFAEADRSSGLDTLKALSQ EECCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHEEEEEECCCCCCHHHHHHHHH GELAGERAFAAALQKIAPRLDYDARFAEALAERPVSLGYYFVPEGYRATRTGTLPPWSLP CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCCCEECCCCCCCCCCCC PEVFGALKPGRPAAGYGANLAPFQDAAQGAGFFNMLADDDGTARQMSLVLPYGEGYYLAL HHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCCEEEEE SASTLRIAFGGDAASAGVEQSELLGRNYLAPWLEVGGIRVPLGADGTVHVPYRAGSPFPY ECCEEEEEECCCHHHCCCCHHHHHCCCCCCHHHHHCCEEEECCCCCEEEEEECCCCCCCC ISAADVLAGKAPVGQLENRIVLVGSTAPGLADLRVTPFSSTFPGVEIHAHLIAGMLDGTT CCHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCC RVTPPWARDARLAAVLLLGAVLIVVLLRFGPALGLAATLALLGLLLAAYGAAWARFQVVP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEH MAAPMLAVAGLYALNTAYGLFAATRSKRQITRLFGQYVPPELAAEMSRDPAHYTMEGQSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCC DMSVLFSDIRGFTNFSEKLSPTELSEVLNAYLSTMTRIVQQHQGTIDKYIGDAIMAFWNA HHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC PVDLADHAARAVRTALEMQAALPQLNDEFAARGWPAVKIGVGVNTGRMSVGNMGSEFRMA CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEE YTVMGDAVNLGSRLEGITKQYGVGILVTQSTVDADPVHAYMKVDEVRVKGKETPVAIYEP EEECCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHEECCCCCCEEEECC LGAKDRLADDVRSAAAAFDAAFAAYQKQDWDAAETALRALDAKSPRALYDVYLERIAQFR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHC AAPPPQGWDGVYVYTTK CCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]