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The map label for this gene is yfgC [H]

Identifier: 74317000

GI number: 74317000

Start: 1045142

End: 1046080

Strand: Direct

Name: yfgC [H]

Synonym: Tbd_0982

Alternate gene names: 74317000

Gene position: 1045142-1046080 (Clockwise)

Preceding gene: 74316999

Following gene: 74317001

Centisome position: 35.92

GC content: 66.03

Gene sequence:

>939_bases
ATGAAAACCCGTGCGATGCAAATCAAGGCCCTCGTCCTCGCGGTCGCCCTCGGCCTGAGCGGGGGTGCGAGCGCGATCGA
TTTCGGCAAGCTGCTCGAAGAGCGCCTCAACCAGGAATTGAACAAGAACAAGCAGCCGCCCGCCGAGCAGACGGCTCCGC
CCGCGGCGCAGAGCGCGGCCGCGTCGCCGCCTCCCGAGAACCAGAAAATCGACGCGCGCCAGCTCGGTTTTGCCCTGTTC
GGCGACTACTCGCCCGAAGAGGAGGCGCGCATCGGCCGCCAGATTTCCGGAAACCTTCTCGGTGCCGTGCCGCTCGTACC
TGACGACAAGCTGCAGAATTACGTCAACCTCGTCGGCAACTGGGTCGCCGCGCAGAGCGGGCGCAGCGACGTCAAGTGGC
GTTTCGGCGTACTCGACACCGAGGACATCAATGCTTTCGCGGCACCGGGTGGCTACGTGTTCATCACCAAGGGGCTTTAT
CGGCGGCTTGGCAACGAAGCGCAGCTCGCCGGTGTCCTCGGCCACGAAATCGCTCATGTCACCAAGAAACATCACCTCAA
GGTGCTCAAGCAGTCGAGCCTGATCGGCGCACTCGGCCAAGCCGCCAGCAAGAAGGCGAAGGACAGCGATCAGGTGGTGC
AGAACCTGATCGGCAACGGGGCCGAAATCATGGCGCGCGGGCTCGACAAGAACGCCGAGTTCGAGGCGGACCGCGTCGGC
ATCGTGTTCGCGGCGCGCGCCGGCTACGAGCCGTGGGGGCTTCCCGACGTTTTGCAGGATCTCGCCGGCCTGCCGGCCAA
GGACGCGCGCACCGGACTGCTGTTCAAGACCCACCCGCACCCGGCCGACCGGCTGGCGGCGTTGGGCGAGGCGGTCGATG
GCCGCCTCGACGCCGTGCAGGGCAAGACGCTCGCCGACCGCTTCTACCGCATCAAGTGA

Upstream 100 bases:

>100_bases
CGCGCAGCTTCGCGGCGCGCGGCGGTCTTGCCGCCGCCAACATCGCTGCGCTGCCTGAACCGCGGCCCGCGCAGCAGCCT
TCGACCTGGGAGGCCAACTG

Downstream 100 bases:

>100_bases
CGCGGGTCTCGTCGAGGCTGCTTCAGGCGGGGCTGTCGGCGCTGTTCGTGCTGCTGATCGCGGCGCACGTCGGCGGCGCG
CTCCATTTCGATCCGATCGA

Product: TPR repeat-containing Zn-dependent protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKTRAMQIKALVLAVALGLSGGASAIDFGKLLEERLNQELNKNKQPPAEQTAPPAAQSAAASPPPENQKIDARQLGFALF
GDYSPEEEARIGRQISGNLLGAVPLVPDDKLQNYVNLVGNWVAAQSGRSDVKWRFGVLDTEDINAFAAPGGYVFITKGLY
RRLGNEAQLAGVLGHEIAHVTKKHHLKVLKQSSLIGALGQAASKKAKDSDQVVQNLIGNGAEIMARGLDKNAEFEADRVG
IVFAARAGYEPWGLPDVLQDLAGLPAKDARTGLLFKTHPHPADRLAALGEAVDGRLDAVQGKTLADRFYRIK

Sequences:

>Translated_312_residues
MKTRAMQIKALVLAVALGLSGGASAIDFGKLLEERLNQELNKNKQPPAEQTAPPAAQSAAASPPPENQKIDARQLGFALF
GDYSPEEEARIGRQISGNLLGAVPLVPDDKLQNYVNLVGNWVAAQSGRSDVKWRFGVLDTEDINAFAAPGGYVFITKGLY
RRLGNEAQLAGVLGHEIAHVTKKHHLKVLKQSSLIGALGQAASKKAKDSDQVVQNLIGNGAEIMARGLDKNAEFEADRVG
IVFAARAGYEPWGLPDVLQDLAGLPAKDARTGLLFKTHPHPADRLAALGEAVDGRLDAVQGKTLADRFYRIK
>Mature_312_residues
MKTRAMQIKALVLAVALGLSGGASAIDFGKLLEERLNQELNKNKQPPAEQTAPPAAQSAAASPPPENQKIDARQLGFALF
GDYSPEEEARIGRQISGNLLGAVPLVPDDKLQNYVNLVGNWVAAQSGRSDVKWRFGVLDTEDINAFAAPGGYVFITKGLY
RRLGNEAQLAGVLGHEIAHVTKKHHLKVLKQSSLIGALGQAASKKAKDSDQVVQNLIGNGAEIMARGLDKNAEFEADRVG
IVFAARAGYEPWGLPDVLQDLAGLPAKDARTGLLFKTHPHPADRLAALGEAVDGRLDAVQGKTLADRFYRIK

Specific function: Unknown

COG id: COG4784

COG function: function code R; Putative Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=246, Percent_Identity=29.2682926829268, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI87081800, Length=162, Percent_Identity=32.0987654320988, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 33407; Mature: 33407

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRAMQIKALVLAVALGLSGGASAIDFGKLLEERLNQELNKNKQPPAEQTAPPAAQSAA
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCC
ASPPPENQKIDARQLGFALFGDYSPEEEARIGRQISGNLLGAVPLVPDDKLQNYVNLVGN
CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHH
WVAAQSGRSDVKWRFGVLDTEDINAFAAPGGYVFITKGLYRRLGNEAQLAGVLGHEIAHV
HHHHCCCCCCCEEEECCCCCCCCCEEECCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHH
TKKHHLKVLKQSSLIGALGQAASKKAKDSDQVVQNLIGNGAEIMARGLDKNAEFEADRVG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEE
IVFAARAGYEPWGLPDVLQDLAGLPAKDARTGLLFKTHPHPADRLAALGEAVDGRLDAVQ
EEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHC
GKTLADRFYRIK
CCHHHHHHHCCC
>Mature Secondary Structure
MKTRAMQIKALVLAVALGLSGGASAIDFGKLLEERLNQELNKNKQPPAEQTAPPAAQSAA
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCC
ASPPPENQKIDARQLGFALFGDYSPEEEARIGRQISGNLLGAVPLVPDDKLQNYVNLVGN
CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHH
WVAAQSGRSDVKWRFGVLDTEDINAFAAPGGYVFITKGLYRRLGNEAQLAGVLGHEIAHV
HHHHCCCCCCCEEEECCCCCCCCCEEECCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHH
TKKHHLKVLKQSSLIGALGQAASKKAKDSDQVVQNLIGNGAEIMARGLDKNAEFEADRVG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEE
IVFAARAGYEPWGLPDVLQDLAGLPAKDARTGLLFKTHPHPADRLAALGEAVDGRLDAVQ
EEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHC
GKTLADRFYRIK
CCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]