| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316999
Identifier: 74316999
GI number: 74316999
Start: 1044609
End: 1045142
Strand: Direct
Name: 74316999
Synonym: Tbd_0981
Alternate gene names: NA
Gene position: 1044609-1045142 (Clockwise)
Preceding gene: 74316993
Following gene: 74317000
Centisome position: 35.9
GC content: 70.6
Gene sequence:
>534_bases ATGAAAAAAACATTTCTGATCAAGGGGCTCGCACTGCTGCTGGCGATGGGCGCGATGCCTGCGCTCGCTGCGCAGGGCAC GGTATTGCGTAACGAAAAGCTCTACAGCCAGCCGAGCGCGACGTCGAAGGTGACGGCGACTGCGGCGAAAGGGGCGAGCG TCACGATCCTCGCCAAACGCGGCGGCTGGTTGCAGGTGAAGTCGGGCAGCTCGAGCGGCTGGATCCGGCTGCTGTCGGTT CGCGCGGGCGCCGGAGGTCTCGGCGGCGCGGGGCTCGGTGATGTGGTCGGCGCCGCGACGACGCGCTCCGACCCGAGCCG GGTCGTCGCGGTGGCCGGCCTGCGCGGACTCGACGACGAGGATCTCAAGCAGGCCAAGTTCGACGGCGCGGAGCTGGCGC GGATGGACGCGTGGGACGCCAGCGCCGCGCAGGCGCGCAGCTTCGCGGCGCGCGGCGGTCTTGCCGCCGCCAACATCGCT GCGCTGCCTGAACCGCGGCCCGCGCAGCAGCCTTCGACCTGGGAGGCCAACTGA
Upstream 100 bases:
>100_bases GTCATCGCCGAGGCTTGCGCCATTGTTCGAAAGGACGGCCGCGCGTGCTTGCGCACGCGTCGGTCACGACATACAGTTTT GCAGTCACACGGAGACCGGC
Downstream 100 bases:
>100_bases TGAAAACCCGTGCGATGCAAATCAAGGCCCTCGTCCTCGCGGTCGCCCTCGGCCTGAGCGGGGGTGCGAGCGCGATCGAT TTCGGCAAGCTGCTCGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MKKTFLIKGLALLLAMGAMPALAAQGTVLRNEKLYSQPSATSKVTATAAKGASVTILAKRGGWLQVKSGSSSGWIRLLSV RAGAGGLGGAGLGDVVGAATTRSDPSRVVAVAGLRGLDDEDLKQAKFDGAELARMDAWDASAAQARSFAARGGLAAANIA ALPEPRPAQQPSTWEAN
Sequences:
>Translated_177_residues MKKTFLIKGLALLLAMGAMPALAAQGTVLRNEKLYSQPSATSKVTATAAKGASVTILAKRGGWLQVKSGSSSGWIRLLSV RAGAGGLGGAGLGDVVGAATTRSDPSRVVAVAGLRGLDDEDLKQAKFDGAELARMDAWDASAAQARSFAARGGLAAANIA ALPEPRPAQQPSTWEAN >Mature_177_residues MKKTFLIKGLALLLAMGAMPALAAQGTVLRNEKLYSQPSATSKVTATAAKGASVTILAKRGGWLQVKSGSSSGWIRLLSV RAGAGGLGGAGLGDVVGAATTRSDPSRVVAVAGLRGLDDEDLKQAKFDGAELARMDAWDASAAQARSFAARGGLAAANIA ALPEPRPAQQPSTWEAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17971; Mature: 17971
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTFLIKGLALLLAMGAMPALAAQGTVLRNEKLYSQPSATSKVTATAAKGASVTILAKR CCCHHHHHHHHHHHHHCCCHHHHCCCEEEECCHHCCCCCCCCEEEEEECCCCEEEEEEEC GGWLQVKSGSSSGWIRLLSVRAGAGGLGGAGLGDVVGAATTRSDPSRVVAVAGLRGLDDE CCEEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCHH DLKQAKFDGAELARMDAWDASAAQARSFAARGGLAAANIAALPEPRPAQQPSTWEAN HHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCHHEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKTFLIKGLALLLAMGAMPALAAQGTVLRNEKLYSQPSATSKVTATAAKGASVTILAKR CCCHHHHHHHHHHHHHCCCHHHHCCCEEEECCHHCCCCCCCCEEEEEECCCCEEEEEEEC GGWLQVKSGSSSGWIRLLSVRAGAGGLGGAGLGDVVGAATTRSDPSRVVAVAGLRGLDDE CCEEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCHH DLKQAKFDGAELARMDAWDASAAQARSFAARGGLAAANIAALPEPRPAQQPSTWEAN HHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCHHEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA