| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316991
Identifier: 74316991
GI number: 74316991
Start: 1037077
End: 1038534
Strand: Direct
Name: 74316991
Synonym: Tbd_0973
Alternate gene names: NA
Gene position: 1037077-1038534 (Clockwise)
Preceding gene: 74316984
Following gene: 74316993
Centisome position: 35.64
GC content: 69.41
Gene sequence:
>1458_bases ATGTTCCGTAACACGAGGCTGCTCGGCACGGCGATCGCCGGCCTGGCCGTGGCGGGCCTGTCCGCAGGCGCGTCCGCCAC GAACGATATCGTCAGCCGGGTCGCCGACCGCGAGAGCGTCGCACTCACGCTCTACGCCGACGATCTCGCCCTGATCAAGG ACGTCCGCCGCGTCCGCCTGGGTCCCGACATGAACCGCCTGAGTTGGCTCGACGTCGCCGCGCAGCTTCGCCCGGAGACG GTGCGCTTGCGCAATCTGTCCGATCCCGCCGGCTTTCGGGTCAGCGAGCAGGCCTTCGATTTCGACCTGCTGACGCCAGA AAGACTGATCGAGCACTACGTCGGGCGCGAAGTCGGTGTCATCCGAACACATCCGGGCACGGGCGCCGAAAGCCGCGAGA AGGCGACGCTGCTGACGAGCCGCGGCGGCGTCGTGCTGCAGTTCCCCGACCGCGTCGAAACAGGAATGCCGGCCCGGCTC GCATTTCCCGCCGTGCCCGACGCGCTCCACACGGCGCCCGCACTCGTCTTTTCGCTCGCCGACGCGCGGGCGGGCGCGCA GCGGCTCGAGCTTTCGTATCTGACGACGGGCCTCTCGTGGCGCGCGGATTACGTCGTGGAACTCCGCGACGATGGGGCGC ATCTGGATCTCGACGGTTGGGTGACGCTGGTCAACCAGAGTGGCGCCGCCTATCGCGACGCCCGGCTGCAGTTCGTCGCC GGCACGCTCAACCGCGTCCGCGACGGGGCGCAGCCGCTGGCGCGCGAGTCGATGTCGCTCGGCGCGAAGTCCGCGGGTGG CGCGTATCTGCAGCCCGAGCCGCTGGCCGGCCATCATCTCTATACGCTGCCGCAGCCGACGAGCCTCGCGGAAAACCAGA CCAAGCAGGTCGCACTCCTGCGCGCGGCGCGCGTGCCGGTCAGGAAGGAACTCGTGCTGCAGGGCGTCGGCCACATCTAT ACGGGCCGCTATCCGGCCCCGTCGCAGCCGGCGCACGTCGGCATGTTCCTCGAATTTGAAAACCGGGGCGCCGGCCTCGG GCTGCCCTTGCCTGCGGGCGTCGTGCGCGTCTACGAGCAGGATGCCCGTGGCAGCAGCCAGTTCGTCGGCGAGGACCGGA TCGGCCACACGCCGAGGAACGAATCGCTCCGGCTGACGCTCGGCGAAGCCTTCGACCACACCGCCGAACGCAGGCAGACG GCTTTCGAGCAACGGCCCGGCACGCAGCGTGACGCCGCCGTCTACGAGTCGGCGCATGAAATCGTGTTGAAGAACGCAGG GAAGGAAACGGCGACCGTCACGGTCCGCGAGCCGATCCCCGGCGACTGGGAGATACTTTCCGAGTCGCGGCCGCACGCGC GACCCGACGCCGGCACCGCCGAGTGGAAGCTGCGCGTGCCGGGCGGCGGCAAAGCGACGCTCGTTTATCGCGTGCGCGTC AAGGGCCTGATGCAGTAG
Upstream 100 bases:
>100_bases GTCATGGCGTTCGCTGCGGGTTTGCCCGGCATTCTAGCGCCGCGCGGCAGTTTCGCCGATATCGTGCATCATGGGCGCTA CGCTGCAAGGAGGAAAAACC
Downstream 100 bases:
>100_bases GGCTCGCCGCGTGGAATGGCGGCGGCGCGACGGCGTCGGGGCGTGCGTTAGGTACTGAGGCCGCGGCGCCGCCGGATGTC GGCGATGAGGCCCTGGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MFRNTRLLGTAIAGLAVAGLSAGASATNDIVSRVADRESVALTLYADDLALIKDVRRVRLGPDMNRLSWLDVAAQLRPET VRLRNLSDPAGFRVSEQAFDFDLLTPERLIEHYVGREVGVIRTHPGTGAESREKATLLTSRGGVVLQFPDRVETGMPARL AFPAVPDALHTAPALVFSLADARAGAQRLELSYLTTGLSWRADYVVELRDDGAHLDLDGWVTLVNQSGAAYRDARLQFVA GTLNRVRDGAQPLARESMSLGAKSAGGAYLQPEPLAGHHLYTLPQPTSLAENQTKQVALLRAARVPVRKELVLQGVGHIY TGRYPAPSQPAHVGMFLEFENRGAGLGLPLPAGVVRVYEQDARGSSQFVGEDRIGHTPRNESLRLTLGEAFDHTAERRQT AFEQRPGTQRDAAVYESAHEIVLKNAGKETATVTVREPIPGDWEILSESRPHARPDAGTAEWKLRVPGGGKATLVYRVRV KGLMQ
Sequences:
>Translated_485_residues MFRNTRLLGTAIAGLAVAGLSAGASATNDIVSRVADRESVALTLYADDLALIKDVRRVRLGPDMNRLSWLDVAAQLRPET VRLRNLSDPAGFRVSEQAFDFDLLTPERLIEHYVGREVGVIRTHPGTGAESREKATLLTSRGGVVLQFPDRVETGMPARL AFPAVPDALHTAPALVFSLADARAGAQRLELSYLTTGLSWRADYVVELRDDGAHLDLDGWVTLVNQSGAAYRDARLQFVA GTLNRVRDGAQPLARESMSLGAKSAGGAYLQPEPLAGHHLYTLPQPTSLAENQTKQVALLRAARVPVRKELVLQGVGHIY TGRYPAPSQPAHVGMFLEFENRGAGLGLPLPAGVVRVYEQDARGSSQFVGEDRIGHTPRNESLRLTLGEAFDHTAERRQT AFEQRPGTQRDAAVYESAHEIVLKNAGKETATVTVREPIPGDWEILSESRPHARPDAGTAEWKLRVPGGGKATLVYRVRV KGLMQ >Mature_485_residues MFRNTRLLGTAIAGLAVAGLSAGASATNDIVSRVADRESVALTLYADDLALIKDVRRVRLGPDMNRLSWLDVAAQLRPET VRLRNLSDPAGFRVSEQAFDFDLLTPERLIEHYVGREVGVIRTHPGTGAESREKATLLTSRGGVVLQFPDRVETGMPARL AFPAVPDALHTAPALVFSLADARAGAQRLELSYLTTGLSWRADYVVELRDDGAHLDLDGWVTLVNQSGAAYRDARLQFVA GTLNRVRDGAQPLARESMSLGAKSAGGAYLQPEPLAGHHLYTLPQPTSLAENQTKQVALLRAARVPVRKELVLQGVGHIY TGRYPAPSQPAHVGMFLEFENRGAGLGLPLPAGVVRVYEQDARGSSQFVGEDRIGHTPRNESLRLTLGEAFDHTAERRQT AFEQRPGTQRDAAVYESAHEIVLKNAGKETATVTVREPIPGDWEILSESRPHARPDAGTAEWKLRVPGGGKATLVYRVRV KGLMQ
Specific function: Unknown
COG id: COG5316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52737; Mature: 52737
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRNTRLLGTAIAGLAVAGLSAGASATNDIVSRVADRESVALTLYADDLALIKDVRRVRL CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHC GPDMNRLSWLDVAAQLRPETVRLRNLSDPAGFRVSEQAFDFDLLTPERLIEHYVGREVGV CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEECHHHCCCCCCCHHHHHHHHCCCCCCE IRTHPGTGAESREKATLLTSRGGVVLQFPDRVETGMPARLAFPAVPDALHTAPALVFSLA EEECCCCCCCCCCCEEEEECCCCEEEECCCHHCCCCCCEEECCCCCHHHHHHHHHHHHHH DARAGAQRLELSYLTTGLSWRADYVVELRDDGAHLDLDGWVTLVNQSGAAYRDARLQFVA HHHCCHHHEEEEHEECCCCCCCEEEEEEECCCCEEECCCEEEEEECCCCCCHHHHHHHHH GTLNRVRDGAQPLARESMSLGAKSAGGAYLQPEPLAGHHLYTLPQPTSLAENQTKQVALL HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHCHHHHHHHH RAARVPVRKELVLQGVGHIYTGRYPAPSQPAHVGMFLEFENRGAGLGLPLPAGVVRVYEQ HHHCCCHHHHHHHHCCCHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHH DARGSSQFVGEDRIGHTPRNESLRLTLGEAFDHTAERRQTAFEQRPGTQRDAAVYESAHE CCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH IVLKNAGKETATVTVREPIPGDWEILSESRPHARPDAGTAEWKLRVPGGGKATLVYRVRV HHHHCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEE KGLMQ CCCCC >Mature Secondary Structure MFRNTRLLGTAIAGLAVAGLSAGASATNDIVSRVADRESVALTLYADDLALIKDVRRVRL CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHC GPDMNRLSWLDVAAQLRPETVRLRNLSDPAGFRVSEQAFDFDLLTPERLIEHYVGREVGV CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEECHHHCCCCCCCHHHHHHHHCCCCCCE IRTHPGTGAESREKATLLTSRGGVVLQFPDRVETGMPARLAFPAVPDALHTAPALVFSLA EEECCCCCCCCCCCEEEEECCCCEEEECCCHHCCCCCCEEECCCCCHHHHHHHHHHHHHH DARAGAQRLELSYLTTGLSWRADYVVELRDDGAHLDLDGWVTLVNQSGAAYRDARLQFVA HHHCCHHHEEEEHEECCCCCCCEEEEEEECCCCEEECCCEEEEEECCCCCCHHHHHHHHH GTLNRVRDGAQPLARESMSLGAKSAGGAYLQPEPLAGHHLYTLPQPTSLAENQTKQVALL HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHCHHHHHHHH RAARVPVRKELVLQGVGHIYTGRYPAPSQPAHVGMFLEFENRGAGLGLPLPAGVVRVYEQ HHHCCCHHHHHHHHCCCHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHH DARGSSQFVGEDRIGHTPRNESLRLTLGEAFDHTAERRQTAFEQRPGTQRDAAVYESAHE CCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH IVLKNAGKETATVTVREPIPGDWEILSESRPHARPDAGTAEWKLRVPGGGKATLVYRVRV HHHHCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEE KGLMQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA