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The map label for this gene is ihfB [H]

Identifier: 74316975

GI number: 74316975

Start: 1020248

End: 1020532

Strand: Direct

Name: ihfB [H]

Synonym: Tbd_0957

Alternate gene names: 74316975

Gene position: 1020248-1020532 (Clockwise)

Preceding gene: 74316974

Following gene: 74316976

Centisome position: 35.06

GC content: 63.16

Gene sequence:

>285_bases
ATGACCAAGTCCGAGCTGATTGCTCAACTGGCGGGGCGGCATTCGCAGTTTTCGATCGCGGATATCGAAATGGCGGTGAA
AACGATCCTCGACGCGCTGGCGAAGAACCTGTCGCGCGGGGAGCGCATCGAGATCCGCGGTTTCGGCAGCTTCAGCCTGA
GCTTTCGACCCGCGCGTCTCGGTCGCAACCCCAAGTCGGGCGAGCGCGTGCAGGTGCCGGCGAAGTATGTGCCGCACTTC
AAGGCCGGCAAGGAACTGCGCGACCGCGTCGATTTCCCGCTGTAG

Upstream 100 bases:

>100_bases
TGAAGAAATTCGCAGCCGAATCCGCTGCGGCCGCGAGCGGCTCGACCAATCTGGGAGCGCTGCTGAAGGCCAAGCTCGAC
AACAAGAACGCTGAGTAACC

Downstream 100 bases:

>100_bases
TCGCTTCCGCCCGCCTCGCGGGCGGGTCGGCGGGCACGGCCTCGCTTGGAAAGGACTGGAAAACGGCGCGCAAGCGCCGT
TTTCTTTTTCCGGTGCGCGC

Product: integration host factor subunit beta

Products: NA

Alternate protein names: IHF-beta [H]

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MTKSELIAQLAGRHSQFSIADIEMAVKTILDALAKNLSRGERIEIRGFGSFSLSFRPARLGRNPKSGERVQVPAKYVPHF
KAGKELRDRVDFPL

Sequences:

>Translated_94_residues
MTKSELIAQLAGRHSQFSIADIEMAVKTILDALAKNLSRGERIEIRGFGSFSLSFRPARLGRNPKSGERVQVPAKYVPHF
KAGKELRDRVDFPL
>Mature_93_residues
TKSELIAQLAGRHSQFSIADIEMAVKTILDALAKNLSRGERIEIRGFGSFSLSFRPARLGRNPKSGERVQVPAKYVPHFK
AGKELRDRVDFPL

Specific function: This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control [H]

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial histone-like protein family [H]

Homologues:

Organism=Escherichia coli, GI1787141, Length=92, Percent_Identity=58.695652173913, Blast_Score=114, Evalue=9e-28,
Organism=Escherichia coli, GI1786644, Length=91, Percent_Identity=37.3626373626374, Blast_Score=69, Evalue=6e-14,
Organism=Escherichia coli, GI1790433, Length=90, Percent_Identity=34.4444444444444, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000119
- InterPro:   IPR010992
- InterPro:   IPR005685 [H]

Pfam domain/function: PF00216 Bac_DNA_binding [H]

EC number: NA

Molecular weight: Translated: 10524; Mature: 10393

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSELIAQLAGRHSQFSIADIEMAVKTILDALAKNLSRGERIEIRGFGSFSLSFRPARL
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEECHHHC
GRNPKSGERVQVPAKYVPHFKAGKELRDRVDFPL
CCCCCCCCEEECCHHHCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure 
TKSELIAQLAGRHSQFSIADIEMAVKTILDALAKNLSRGERIEIRGFGSFSLSFRPARL
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEECHHHC
GRNPKSGERVQVPAKYVPHFKAGKELRDRVDFPL
CCCCCCCCEEECCHHHCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA