| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is hisC1
Identifier: 74316970
GI number: 74316970
Start: 1014462
End: 1015616
Strand: Direct
Name: hisC1
Synonym: Tbd_0952
Alternate gene names: 74316970
Gene position: 1014462-1015616 (Clockwise)
Preceding gene: 74316969
Following gene: 74316971
Centisome position: 34.86
GC content: 68.74
Gene sequence:
>1155_bases ATGAGCGGCTGCGATTCGATCTGCGCTGCAACCGCGCCGCCCCACGTGCGCGCGATCGCTCCGTATCAGCCCGGCAAGCC GATTTCCGAGCTTGCACGCGAACTGGGCCTGGCCGAAGCCGATATCGTCAAGCTCGCTTCGAACGAAAATCCGCTCGGTC CGAGCCCGTTCGCGCTTGCCGCGGCCCAGGACGCGCTCCTGGACATGGCCTTGTATCCGGACGGTGCGGGCTACGCGCTG AAGGCGAAGCTCTCGGCCAGGCTCGGCGTCGACGCGGCGCAGATCGTGCTCGGCAATGGTTCCAACGACGTGCTCGACAT GGTCGCGCGCGCCTATCTCGCGCCGGGGACCTCGGCCGTCTATGCGCAGTACGCGTTCGCGGTCTACCCGATCGCCACGC ATACGGTCGGTGCCCACGGGATCGCGGTCGCGGCGCGGGACTTCGGCCACGACCTCGAACGCATGCGCGCCGCGATCCGT GACGACACCCGGGTGGTGTGGATCGCGAATCCCAACAACCCGACCGGCACTTTCCTGCCGTGGAACGAGATCGAGGCCTT CCTCGAGACCGTGCCGCCCCGCGTGCTGGTCGTCCTCGACGAGGCCTACGGCGAATACCTCGCGCCCGCGTCGCGCTGCG ACACGGCGGCCTGGGTGGTGCGTTTCCCCAATCTCTTGATCAGCCGCACCTTTTCCAAGGCCTACGGTCTGGCCGGGCTA CGGGTCGGCTACGGGATCGGGCACGCCGACGTCGTCGACCTGCTGAACCGGGTCCGCCATCCGTTCAACGTCAACGCCTC GGCGCTCGCCGCGGCGGAGGCCGCGCTCGACGACGACGCCTTTCTCGCGCGAAGCTATGCGCTCAACGCGGCGGGCATGC AGCAACTCTTAGGCGGGCTCGCGGCCCTGGACATCGAGACCGTCCCGTCGAAGGGCAATTTCGTCCTCGCGCGGGTCGGC GATGCGGCGCGCATCAACACCGAGCTACTCAAGCGCGGCGTGATCGTACGACCGGTCGCAGCCTACGGGCTGCCCGAATT CCTGCGCGTGTCTGTCGGTCTTGCCGGCCAGAATGCGCGCTTTCTCGACGCCCTGGGCGAGGTTCTCGCGGCGGCGCCCG GCCGGCACCCCGACAGCCGGAAAGCCCTGCCGTGA
Upstream 100 bases:
>100_bases AAGGTCACCGCAAGGACGCACGGCTCGCCGCGGCGCTCGCCGAAATCGATTCGCGGGCGGCCTTCCTCAAGATCCTCGGC TCCTACCCTGCGGCGTCGGC
Downstream 100 bases:
>100_bases TCGTCGAGCGCCTCGCAGTCATTGGCGTCGGCCTGATCGGTGGATCGTTTGCGCTCGCCCTGAAGCAGGCCGGCGCGGTT GGCGAGGTGGTCGGTGTCGG
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 1
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MSGCDSICAATAPPHVRAIAPYQPGKPISELARELGLAEADIVKLASNENPLGPSPFALAAAQDALLDMALYPDGAGYAL KAKLSARLGVDAAQIVLGNGSNDVLDMVARAYLAPGTSAVYAQYAFAVYPIATHTVGAHGIAVAARDFGHDLERMRAAIR DDTRVVWIANPNNPTGTFLPWNEIEAFLETVPPRVLVVLDEAYGEYLAPASRCDTAAWVVRFPNLLISRTFSKAYGLAGL RVGYGIGHADVVDLLNRVRHPFNVNASALAAAEAALDDDAFLARSYALNAAGMQQLLGGLAALDIETVPSKGNFVLARVG DAARINTELLKRGVIVRPVAAYGLPEFLRVSVGLAGQNARFLDALGEVLAAAPGRHPDSRKALP
Sequences:
>Translated_384_residues MSGCDSICAATAPPHVRAIAPYQPGKPISELARELGLAEADIVKLASNENPLGPSPFALAAAQDALLDMALYPDGAGYAL KAKLSARLGVDAAQIVLGNGSNDVLDMVARAYLAPGTSAVYAQYAFAVYPIATHTVGAHGIAVAARDFGHDLERMRAAIR DDTRVVWIANPNNPTGTFLPWNEIEAFLETVPPRVLVVLDEAYGEYLAPASRCDTAAWVVRFPNLLISRTFSKAYGLAGL RVGYGIGHADVVDLLNRVRHPFNVNASALAAAEAALDDDAFLARSYALNAAGMQQLLGGLAALDIETVPSKGNFVLARVG DAARINTELLKRGVIVRPVAAYGLPEFLRVSVGLAGQNARFLDALGEVLAAAPGRHPDSRKALP >Mature_383_residues SGCDSICAATAPPHVRAIAPYQPGKPISELARELGLAEADIVKLASNENPLGPSPFALAAAQDALLDMALYPDGAGYALK AKLSARLGVDAAQIVLGNGSNDVLDMVARAYLAPGTSAVYAQYAFAVYPIATHTVGAHGIAVAARDFGHDLERMRAAIRD DTRVVWIANPNNPTGTFLPWNEIEAFLETVPPRVLVVLDEAYGEYLAPASRCDTAAWVVRFPNLLISRTFSKAYGLAGLR VGYGIGHADVVDLLNRVRHPFNVNASALAAAEAALDDDAFLARSYALNAAGMQQLLGGLAALDIETVPSKGNFVLARVGD AARINTELLKRGVIVRPVAAYGLPEFLRVSVGLAGQNARFLDALGEVLAAAPGRHPDSRKALP
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=360, Percent_Identity=29.1666666666667, Blast_Score=134, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6322075, Length=360, Percent_Identity=28.0555555555556, Blast_Score=109, Evalue=7e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS81_THIDA (Q3SK85)
Other databases:
- EMBL: CP000116 - RefSeq: YP_314710.1 - ProteinModelPortal: Q3SK85 - SMR: Q3SK85 - STRING: Q3SK85 - GeneID: 3672744 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_0952 - NMPDR: fig|292415.3.peg.542 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: KLIYIAN - ProtClustDB: PRK02731 - BioCyc: TDEN292415:TBD_0952-MONOMER - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 40438; Mature: 40306
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGCDSICAATAPPHVRAIAPYQPGKPISELARELGLAEADIVKLASNENPLGPSPFALA CCCCCCHHHCCCCCCEEEECCCCCCCCHHHHHHHHCCCHHHHHEECCCCCCCCCCCHHHH AAQDALLDMALYPDGAGYALKAKLSARLGVDAAQIVLGNGSNDVLDMVARAYLAPGTSAV HHHHHHHHHEECCCCCCEEEEEEHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHH YAQYAFAVYPIATHTVGAHGIAVAARDFGHDLERMRAAIRDDTRVVWIANPNNPTGTFLP HHHHHHHEEEHHHHCCCCCHHEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC WNEIEAFLETVPPRVLVVLDEAYGEYLAPASRCDTAAWVVRFPNLLISRTFSKAYGLAGL HHHHHHHHHHCCCEEEEEEEHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC RVGYGIGHADVVDLLNRVRHPFNVNASALAAAEAALDDDAFLARSYALNAAGMQQLLGGL HHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHH AALDIETVPSKGNFVLARVGDAARINTELLKRGVIVRPVAAYGLPEFLRVSVGLAGQNAR HHEEEEECCCCCCEEEEECCCCHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHCCCCCCCH FLDALGEVLAAAPGRHPDSRKALP HHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SGCDSICAATAPPHVRAIAPYQPGKPISELARELGLAEADIVKLASNENPLGPSPFALA CCCCCHHHCCCCCCEEEECCCCCCCCHHHHHHHHCCCHHHHHEECCCCCCCCCCCHHHH AAQDALLDMALYPDGAGYALKAKLSARLGVDAAQIVLGNGSNDVLDMVARAYLAPGTSAV HHHHHHHHHEECCCCCCEEEEEEHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHH YAQYAFAVYPIATHTVGAHGIAVAARDFGHDLERMRAAIRDDTRVVWIANPNNPTGTFLP HHHHHHHEEEHHHHCCCCCHHEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC WNEIEAFLETVPPRVLVVLDEAYGEYLAPASRCDTAAWVVRFPNLLISRTFSKAYGLAGL HHHHHHHHHHCCCEEEEEEEHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC RVGYGIGHADVVDLLNRVRHPFNVNASALAAAEAALDDDAFLARSYALNAAGMQQLLGGL HHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHH AALDIETVPSKGNFVLARVGDAARINTELLKRGVIVRPVAAYGLPEFLRVSVGLAGQNAR HHEEEEECCCCCCEEEEECCCCHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHCCCCCCCH FLDALGEVLAAAPGRHPDSRKALP HHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA