Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316952

Identifier: 74316952

GI number: 74316952

Start: 991776

End: 993539

Strand: Direct

Name: 74316952

Synonym: Tbd_0934

Alternate gene names: NA

Gene position: 991776-993539 (Clockwise)

Preceding gene: 74316951

Following gene: 74316953

Centisome position: 34.08

GC content: 58.96

Gene sequence:

>1764_bases
ATGGCAACAGTTATCGCTCGCCCCCTCGAACTCGATCTGCTGTGCCAAAAACTTGATGCGGACTACGCGAACCGAATCAC
CGGGACGGGAAACACTCCAGAGTCTCGGCGTAGCAACTACCTGTCCAAGGCAATCGCGGCATTCGTCCTGCACGAAGACG
CTGGCGCCAATCTGGATGAGGCCGTGGCCGCCAGCATCGATGGTGGCCAGGATCATGGTATCGATTCGGTGTTCGTTTCA
ACGGATCAAACGATCTGGCTGGTCCAGTCCAAGTACAAGGAGTCGGGCACCGGCGAGCCCGAACTCGGTGATGTATCCAA
ATTTCGGGATGGCGTAACCGACCTTCTGCAAGGACGCTGGAATCGCTTCAATAACGCCCTGCAAAACCGCCAAGCGGCAA
TCACCAATGCCTTGAACAGTGGTGTCTGCAGGATCAAAGTCGTGCTGGCCTATTCCGGCACGGCGGTGTCCGATGATCGG
CGCGACATGTTTTCCGACTTGGAGCGCGCGTTCAATGGCGCGAATCCGGGCTTTCTTCGGTGCCATGCTTATGGGCTCAC
GACCCTGCACGACCTACATCTAGACGGAGTTTCGGCCCAGCCCATAGAAGCCGAAGTCGAATTGAAGGACTTCGGCCACA
CGCAGGAACCCTACCGGGCGTTCTACGGGCGCATGGACGGCAAACGGCTCGCCGAGCTTTGGGCGGCACACGAAGAACAT
CTAGTTGATCGTAACATTCGCCGGTTCAAGGGCACGACCACCGTCAATGCAGGGCTGACCGAGACACTCCGACAAGAAGC
ACAGCACTTCTTCTACTTCAATAACGGCGTCACCTTCCTCTGCGATTCCATAACGGAACAGCACCCCCGCGACCCGCATC
GTCAAACTGGGACGTTTCGCATTCGCGGGTTGTCCATCATCAACGGCGCGCAAACGGTTGGGGCGATCGCCCGCGAGCCA
CTGGCCCACTACGATGCTCATCCCACCGTAGTCATGGCGACTTTCGTTTGTCTTGAGAACGCGCCTGATGGTTTTGGCGA
TCGAGTCACCCAATCGCGCAACCGCCAGAATGCCGTTGAGCTGGAAGATTTTGCCGCGCTTGATGAACGTCAGACCATGT
GGCAGCAGACCTTGCAGATGGCCGGCGTCACCTATCTGGTCAAGCAGGGGGAGGACGATCCGCCGCTATCACCAACCTGC
TTCAGCGCACGTGAACTCGCACCGTTCCTGGCTTGCACCGTAACCACGAACGACTGGCAGGACTACGTGACCGCGGCCAA
GGCCGACAAGAAGAAGCTGTTTGGGCGGGAGGGGCTGGTATCAGCCACCGACCCCCTACGCCAATCCTACGAACGGCTCT
TCGCCGACTCGCTCACGGCAAGACAAATGTGGCGGATAGTCCAAATCGGCCGAGTGGTCGTAGAGAAGGTCCGCGCCCGT
GCCACCGCCGAGGGTGATCCCGCCGGTTTGCCAGCGGGGACACTCCCCGCTCGGGAGATTCTCACTCACGGCGCCTGGTT
GGTTCTCCACGTCATCTTCATCCGCCTTCAGTTGCAGAACGGACCGACGCTGGCATTGACCCAGGATGAACTGACAGCGA
TTTCGCGCGAGGTCGACCTTGTTTGCGAGCGCCTTGTGAGTTCTGTCCAGGGCGTGCAGTGGAACAAGCAGGCGCGCAGC
GTCTTTGAGAACAAAACGGACTGTCGAACCGTGAAAGGCCGTTTGATGGCGGCCTTGGCGCAGCAGGGTCAGGGAGGAAA
TTAA

Upstream 100 bases:

>100_bases
TCGAAGCGCAGCGCAACGACTTGATCAGCCAGCTTGAAGCGCAACTCCAACAGCAGGTCGAGGAGCGCACGCTGTTCACT
GTCGAGTGGGAGCTGGTCTG

Downstream 100 bases:

>100_bases
TAGTGCAAGCGAACATCAAAGGTCTGGTGGATCGGCTGGAGCTTTCCCAGGGCAAGGCAATGATGCCTCTTTACGAGGCT
ATCTCGAATGCCGTCGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 587; Mature: 586

Protein sequence:

>587_residues
MATVIARPLELDLLCQKLDADYANRITGTGNTPESRRSNYLSKAIAAFVLHEDAGANLDEAVAASIDGGQDHGIDSVFVS
TDQTIWLVQSKYKESGTGEPELGDVSKFRDGVTDLLQGRWNRFNNALQNRQAAITNALNSGVCRIKVVLAYSGTAVSDDR
RDMFSDLERAFNGANPGFLRCHAYGLTTLHDLHLDGVSAQPIEAEVELKDFGHTQEPYRAFYGRMDGKRLAELWAAHEEH
LVDRNIRRFKGTTTVNAGLTETLRQEAQHFFYFNNGVTFLCDSITEQHPRDPHRQTGTFRIRGLSIINGAQTVGAIAREP
LAHYDAHPTVVMATFVCLENAPDGFGDRVTQSRNRQNAVELEDFAALDERQTMWQQTLQMAGVTYLVKQGEDDPPLSPTC
FSARELAPFLACTVTTNDWQDYVTAAKADKKKLFGREGLVSATDPLRQSYERLFADSLTARQMWRIVQIGRVVVEKVRAR
ATAEGDPAGLPAGTLPAREILTHGAWLVLHVIFIRLQLQNGPTLALTQDELTAISREVDLVCERLVSSVQGVQWNKQARS
VFENKTDCRTVKGRLMAALAQQGQGGN

Sequences:

>Translated_587_residues
MATVIARPLELDLLCQKLDADYANRITGTGNTPESRRSNYLSKAIAAFVLHEDAGANLDEAVAASIDGGQDHGIDSVFVS
TDQTIWLVQSKYKESGTGEPELGDVSKFRDGVTDLLQGRWNRFNNALQNRQAAITNALNSGVCRIKVVLAYSGTAVSDDR
RDMFSDLERAFNGANPGFLRCHAYGLTTLHDLHLDGVSAQPIEAEVELKDFGHTQEPYRAFYGRMDGKRLAELWAAHEEH
LVDRNIRRFKGTTTVNAGLTETLRQEAQHFFYFNNGVTFLCDSITEQHPRDPHRQTGTFRIRGLSIINGAQTVGAIAREP
LAHYDAHPTVVMATFVCLENAPDGFGDRVTQSRNRQNAVELEDFAALDERQTMWQQTLQMAGVTYLVKQGEDDPPLSPTC
FSARELAPFLACTVTTNDWQDYVTAAKADKKKLFGREGLVSATDPLRQSYERLFADSLTARQMWRIVQIGRVVVEKVRAR
ATAEGDPAGLPAGTLPAREILTHGAWLVLHVIFIRLQLQNGPTLALTQDELTAISREVDLVCERLVSSVQGVQWNKQARS
VFENKTDCRTVKGRLMAALAQQGQGGN
>Mature_586_residues
ATVIARPLELDLLCQKLDADYANRITGTGNTPESRRSNYLSKAIAAFVLHEDAGANLDEAVAASIDGGQDHGIDSVFVST
DQTIWLVQSKYKESGTGEPELGDVSKFRDGVTDLLQGRWNRFNNALQNRQAAITNALNSGVCRIKVVLAYSGTAVSDDRR
DMFSDLERAFNGANPGFLRCHAYGLTTLHDLHLDGVSAQPIEAEVELKDFGHTQEPYRAFYGRMDGKRLAELWAAHEEHL
VDRNIRRFKGTTTVNAGLTETLRQEAQHFFYFNNGVTFLCDSITEQHPRDPHRQTGTFRIRGLSIINGAQTVGAIAREPL
AHYDAHPTVVMATFVCLENAPDGFGDRVTQSRNRQNAVELEDFAALDERQTMWQQTLQMAGVTYLVKQGEDDPPLSPTCF
SARELAPFLACTVTTNDWQDYVTAAKADKKKLFGREGLVSATDPLRQSYERLFADSLTARQMWRIVQIGRVVVEKVRARA
TAEGDPAGLPAGTLPAREILTHGAWLVLHVIFIRLQLQNGPTLALTQDELTAISREVDLVCERLVSSVQGVQWNKQARSV
FENKTDCRTVKGRLMAALAQQGQGGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65019; Mature: 64888

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVIARPLELDLLCQKLDADYANRITGTGNTPESRRSNYLSKAIAAFVLHEDAGANLDE
CCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
AVAASIDGGQDHGIDSVFVSTDQTIWLVQSKYKESGTGEPELGDVSKFRDGVTDLLQGRW
HHHHCCCCCCCCCCCEEEEECCCEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
NRFNNALQNRQAAITNALNSGVCRIKVVLAYSGTAVSDDRRDMFSDLERAFNGANPGFLR
HHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEE
CHAYGLTTLHDLHLDGVSAQPIEAEVELKDFGHTQEPYRAFYGRMDGKRLAELWAAHEEH
EEEECCCEEEEEECCCCCCCCCCEEEEHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHH
LVDRNIRRFKGTTTVNAGLTETLRQEAQHFFYFNNGVTFLCDSITEQHPRDPHRQTGTFR
HHHHHHHHHCCCCEECCCHHHHHHHHHHHEEEECCCHHHHHHHHHHCCCCCCCCCCCCEE
IRGLSIINGAQTVGAIAREPLAHYDAHPTVVMATFVCLENAPDGFGDRVTQSRNRQNAVE
EEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC
LEDFAALDERQTMWQQTLQMAGVTYLVKQGEDDPPLSPTCFSARELAPFLACTVTTNDWQ
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHCCEEEEEEECCCHH
DYVTAAKADKKKLFGREGLVSATDPLRQSYERLFADSLTARQMWRIVQIGRVVVEKVRAR
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAEGDPAGLPAGTLPAREILTHGAWLVLHVIFIRLQLQNGPTLALTQDELTAISREVDL
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEHHHHHHHHHHHHH
VCERLVSSVQGVQWNKQARSVFENKTDCRTVKGRLMAALAQQGQGGN
HHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ATVIARPLELDLLCQKLDADYANRITGTGNTPESRRSNYLSKAIAAFVLHEDAGANLDE
CCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
AVAASIDGGQDHGIDSVFVSTDQTIWLVQSKYKESGTGEPELGDVSKFRDGVTDLLQGRW
HHHHCCCCCCCCCCCEEEEECCCEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
NRFNNALQNRQAAITNALNSGVCRIKVVLAYSGTAVSDDRRDMFSDLERAFNGANPGFLR
HHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEE
CHAYGLTTLHDLHLDGVSAQPIEAEVELKDFGHTQEPYRAFYGRMDGKRLAELWAAHEEH
EEEECCCEEEEEECCCCCCCCCCEEEEHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHH
LVDRNIRRFKGTTTVNAGLTETLRQEAQHFFYFNNGVTFLCDSITEQHPRDPHRQTGTFR
HHHHHHHHHCCCCEECCCHHHHHHHHHHHEEEECCCHHHHHHHHHHCCCCCCCCCCCCEE
IRGLSIINGAQTVGAIAREPLAHYDAHPTVVMATFVCLENAPDGFGDRVTQSRNRQNAVE
EEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC
LEDFAALDERQTMWQQTLQMAGVTYLVKQGEDDPPLSPTCFSARELAPFLACTVTTNDWQ
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHCCEEEEEEECCCHH
DYVTAAKADKKKLFGREGLVSATDPLRQSYERLFADSLTARQMWRIVQIGRVVVEKVRAR
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAEGDPAGLPAGTLPAREILTHGAWLVLHVIFIRLQLQNGPTLALTQDELTAISREVDL
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEHHHHHHHHHHHHH
VCERLVSSVQGVQWNKQARSVFENKTDCRTVKGRLMAALAQQGQGGN
HHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA