| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316936
Identifier: 74316936
GI number: 74316936
Start: 972925
End: 973761
Strand: Direct
Name: 74316936
Synonym: Tbd_0918
Alternate gene names: NA
Gene position: 972925-973761 (Clockwise)
Preceding gene: 74316935
Following gene: 74316938
Centisome position: 33.44
GC content: 63.68
Gene sequence:
>837_bases ATGAAGAAAACGGTATCAATCCTGTTCTGCCTCGGCGCACTCGTGCTCGCGACCGGCGCCCAGGCGACCACGCCCGAGGA AGGGCGCGCGAAGATCGTGAAGGCGGTGCAGAAGGCGTATCCCGAGATCAAGTTCGAGGATTACGTGCACGGCGCGATGG CCTTCAGCCCCGACGCGCTCGCGCAATACGAGGCGATCATGGCTTTTCCGCCTTTCGACGGTGAAATCGAGAAGGGCGCA AAGTTATGGGAAACCCCATTCAAGAACGGGCGGCGCTACGCCGACTGCTTTCCGCGCGGCGGCAAGAATGTCGCCGGCAA CTACCCGCAGTTCGACCGGGCGACGAAGAAGGTCGTGACCTTCGAAATGGCGCTCAACCAGTGCCGCACGGCGAACGGCG AAGCGCCCTACAAGCACGGCGACATGAATACGATGGGCGTGCTCACGGCCTACGCGCGGACGCTGTCGGACGGCATGAAA ATGAACATCAAGGTCGAAGGCGCCGACGCACGGGCCGCGTTCGAGGCGGGCGAGCGCTTTTTCCACCAGCGCCGCGGCCA GCTCAACTTCTCGTGCGCGGGCTGCCATCTCGGCAACGCTGGCAAGATCCTGCGCACCGAATACCTCTCGATGGCGCCCG GGCAGGCGACGCACTGGCCGGCCTTCCGCGGCGGCGACTACACGCTGTTCACGCTGCAGCGCCGCTATGCCGCGTGCAAC CAGATGGTGCGCTTCGCGCCGCTGGAAATCGGCGGAGAGGAATACAACAACCTCGAGTACTACCACAGCTATCTGAGCAA CGGTCTGCCGCTCAAGGCGGCGGTGTTCCGCAAATGA
Upstream 100 bases:
>100_bases CCTTCGGCAAGCACAAGATCCTCAGCGACGAAGAAATCGACAAGGTCGTCGATTACGTCTACGGCCTCTGACGACCGCCG GCCCCCATACGGAGACAATG
Downstream 100 bases:
>100_bases CCCGCGCGCGGACGCAACGCGCCCTTGACCTGATCGAGGAGAAAACGATGAAGCGAATCCATGACACGCTCCCCGCGCTC GCCGCCGCATTGCTGCTCGG
Product: diheme cytochrome SoxA
Products: NA
Alternate protein names: Diheme Cytochrome C SoxA; Sulfur Oxidation Protein; Sulfur Oxidation Protein SoxA; Diheme Cytochrome C; Diheme Cytochrome C Sulfur Oxidising Protein SoxA; Sulfur Oxidation Protein SoxXA Diheme Cytochrome C Subunit; Cytochrome C; Secreted Protein-Like Protein; Chain G Soxax Complex; Sulfur Oxidation Diheme Cytochrome SoxA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MKKTVSILFCLGALVLATGAQATTPEEGRAKIVKAVQKAYPEIKFEDYVHGAMAFSPDALAQYEAIMAFPPFDGEIEKGA KLWETPFKNGRRYADCFPRGGKNVAGNYPQFDRATKKVVTFEMALNQCRTANGEAPYKHGDMNTMGVLTAYARTLSDGMK MNIKVEGADARAAFEAGERFFHQRRGQLNFSCAGCHLGNAGKILRTEYLSMAPGQATHWPAFRGGDYTLFTLQRRYAACN QMVRFAPLEIGGEEYNNLEYYHSYLSNGLPLKAAVFRK
Sequences:
>Translated_278_residues MKKTVSILFCLGALVLATGAQATTPEEGRAKIVKAVQKAYPEIKFEDYVHGAMAFSPDALAQYEAIMAFPPFDGEIEKGA KLWETPFKNGRRYADCFPRGGKNVAGNYPQFDRATKKVVTFEMALNQCRTANGEAPYKHGDMNTMGVLTAYARTLSDGMK MNIKVEGADARAAFEAGERFFHQRRGQLNFSCAGCHLGNAGKILRTEYLSMAPGQATHWPAFRGGDYTLFTLQRRYAACN QMVRFAPLEIGGEEYNNLEYYHSYLSNGLPLKAAVFRK >Mature_278_residues MKKTVSILFCLGALVLATGAQATTPEEGRAKIVKAVQKAYPEIKFEDYVHGAMAFSPDALAQYEAIMAFPPFDGEIEKGA KLWETPFKNGRRYADCFPRGGKNVAGNYPQFDRATKKVVTFEMALNQCRTANGEAPYKHGDMNTMGVLTAYARTLSDGMK MNIKVEGADARAAFEAGERFFHQRRGQLNFSCAGCHLGNAGKILRTEYLSMAPGQATHWPAFRGGDYTLFTLQRRYAACN QMVRFAPLEIGGEEYNNLEYYHSYLSNGLPLKAAVFRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30878; Mature: 30878
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTVSILFCLGALVLATGAQATTPEEGRAKIVKAVQKAYPEIKFEDYVHGAMAFSPDAL CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHH AQYEAIMAFPPFDGEIEKGAKLWETPFKNGRRYADCFPRGGKNVAGNYPQFDRATKKVVT HHHHHEEEECCCCCCHHHCCHHHCCHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHH FEMALNQCRTANGEAPYKHGDMNTMGVLTAYARTLSDGMKMNIKVEGADARAAFEAGERF HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHH FHQRRGQLNFSCAGCHLGNAGKILRTEYLSMAPGQATHWPAFRGGDYTLFTLQRRYAACN HHHHCCCCCEEEECCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHH QMVRFAPLEIGGEEYNNLEYYHSYLSNGLPLKAAVFRK HHHHHCCCEECCCCCCCHHHHHHHHCCCCCCCHHCCCC >Mature Secondary Structure MKKTVSILFCLGALVLATGAQATTPEEGRAKIVKAVQKAYPEIKFEDYVHGAMAFSPDAL CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHH AQYEAIMAFPPFDGEIEKGAKLWETPFKNGRRYADCFPRGGKNVAGNYPQFDRATKKVVT HHHHHEEEECCCCCCHHHCCHHHCCHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHH FEMALNQCRTANGEAPYKHGDMNTMGVLTAYARTLSDGMKMNIKVEGADARAAFEAGERF HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHH FHQRRGQLNFSCAGCHLGNAGKILRTEYLSMAPGQATHWPAFRGGDYTLFTLQRRYAACN HHHHCCCCCEEEECCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHH QMVRFAPLEIGGEEYNNLEYYHSYLSNGLPLKAAVFRK HHHHHCCCEECCCCCCCHHHHHHHHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA