| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316935
Identifier: 74316935
GI number: 74316935
Start: 972530
End: 972895
Strand: Direct
Name: 74316935
Synonym: Tbd_0917
Alternate gene names: NA
Gene position: 972530-972895 (Clockwise)
Preceding gene: 74316934
Following gene: 74316936
Centisome position: 33.42
GC content: 61.48
Gene sequence:
>366_bases ATGTATCGAATCACCAGAAACGCCCGTGCGCTCGCGTGCCTAATCGCGATCGCGGGCTTGGCGCAGCCCCTGTATGCAGC GGAATCCAAATCCCCGAGCGGGCAGGAACTTGCCTTCGACAACCGCAAGGGCAATTGCCTCGCGTGCCACATGGTGCCCG GTGACGCGAAAGCCGTGACTCAGGCGAACATCGCGCCGCCGCTCATCGAGATGAAGGCGCGATTCCCCGATCGCGCGAAA CTCTACGCGCAGTTGTGGGATGCCTCGAAGGCCAACCCCGACAGCCTGATGCCGCCCTTCGGCAAGCACAAGATCCTCAG CGACGAAGAAATCGACAAGGTCGTCGATTACGTCTACGGCCTCTGA
Upstream 100 bases:
>100_bases GGCATGCGGACCGACGGCCGCACCACCTGCGTCGACCTGAAGCCCGGGCCGTGCAGGCTCGATTAACCCGGGCGGCGACA CCCGAACACAAGGAGCAGTC
Downstream 100 bases:
>100_bases CGACCGCCGGCCCCCATACGGAGACAATGATGAAGAAAACGGTATCAATCCTGTTCTGCCTCGGCGCACTCGTGCTCGCG ACCGGCGCCCAGGCGACCAC
Product: monoheme cytochrome SoxX
Products: NA
Alternate protein names: Sulfur Oxidation Protein SoxX; Monoheme Cytochrome SoxX; Sulfur Oxidation Protein; Cytochrome C
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MYRITRNARALACLIAIAGLAQPLYAAESKSPSGQELAFDNRKGNCLACHMVPGDAKAVTQANIAPPLIEMKARFPDRAK LYAQLWDASKANPDSLMPPFGKHKILSDEEIDKVVDYVYGL
Sequences:
>Translated_121_residues MYRITRNARALACLIAIAGLAQPLYAAESKSPSGQELAFDNRKGNCLACHMVPGDAKAVTQANIAPPLIEMKARFPDRAK LYAQLWDASKANPDSLMPPFGKHKILSDEEIDKVVDYVYGL >Mature_121_residues MYRITRNARALACLIAIAGLAQPLYAAESKSPSGQELAFDNRKGNCLACHMVPGDAKAVTQANIAPPLIEMKARFPDRAK LYAQLWDASKANPDSLMPPFGKHKILSDEEIDKVVDYVYGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13247; Mature: 13247
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRITRNARALACLIAIAGLAQPLYAAESKSPSGQELAFDNRKGNCLACHMVPGDAKAVT CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEECCCCCCHHH QANIAPPLIEMKARFPDRAKLYAQLWDASKANPDSLMPPFGKHKILSDEEIDKVVDYVYG HCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC L C >Mature Secondary Structure MYRITRNARALACLIAIAGLAQPLYAAESKSPSGQELAFDNRKGNCLACHMVPGDAKAVT CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEECCCCCCHHH QANIAPPLIEMKARFPDRAKLYAQLWDASKANPDSLMPPFGKHKILSDEEIDKVVDYVYG HCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA