| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74316932
Identifier: 74316932
GI number: 74316932
Start: 969862
End: 971328
Strand: Direct
Name: 74316932
Synonym: Tbd_0914
Alternate gene names: NA
Gene position: 969862-971328 (Clockwise)
Preceding gene: 74316931
Following gene: 74316933
Centisome position: 33.33
GC content: 62.85
Gene sequence:
>1467_bases ATGAGCATCAACAGAAGGCAGTTCATGAAGAACGCGATCGCCGCCGGCATGGCGGGAACCGCGACGATGCTGGGATCGCG CAGCGCGTTTTCGGCGGTCCACGACCCGGTTGGCGAGGCACAGGCCGACCTGTTCAGGAAATTCAAGGGCAACGTCGTGC TGTTGCCGAGCAAGTACGGCGGCTACGTGCAGGCAATGGACCTGTCGACGCCGGAAACGCTGGCCTGGTATTCCTACGGC CTGCATGGCATCGACATGCCGATTCCCCACCACATCGCTGCCATGCCGTCGAAGGACCCCTACAAGGGCTTCGACTTCTA CCAGACGATGCAGCCGCCGGCGGCGCCCTACGTCAACGAGAACTCGCCCGAGTGGCGCAACCGCGGCGACTTCAAGATGT TCAAGATGCGCTACGACGGCAGCGGCAAGCAGAACTCGATCACGGTCGTCAACGACATCGGCGAAACCACCGGCATGTCG CTCGGCGTGCACGTGTCGATCGGTGTCGGTGAAAACGCGAACAAGTACGTCGCCTTCGCCGACGGCCAGAAGGACATGGT GCTGATCACCGACATCGGCGACAACCCGAAGATCGTCAAGGCCTTCCGCGCCGACTACGATCCCGTCGCGCGCCAGCTCA ACATCAGCCACGTCTTCCCCGATTCGACGACCGGCAAGTTCGACTACGTCGGGCGCAAGGGCATGAAGACGTCGCATGAG GCGATGCTCGGCGAGGAACTGATGCCGGCCGACCCGACCGCGGTCTTCGTCGACGCGTTCACTTGGCATCCGACGCTGCC GTTCGGTGCGATCCTGATCCGCCGTCTCGGCTGCTGCGCGATCGTCGACACGCGGACCTGGGAAGTCGTCTCGCTGCTGT CGACCGCCAAGGGCTCGCCCGACAACTTCCCGCTCGTCAAGCAGACGGGGTTCACCTGGACCTTCGCGGTGCCGTCGGTG CTGACGCCGCTGCACGAGGCGGGATTCGTCACCAGCGGGGAGTATTTCGTCGCCTGCAACAACGTGCTGCAGAACAACAT CGCGGTCTACCGCTCGACCGACGAAAACCCCAACAAGTGGAAGAAGGAGACCTTCGTCGAAGGCTTCGGCACCAAGTACC TGCCGCTGCACATGGGCAACGTGCCGGATTCGCGCTTCGCCTTCTTCACGATGTGGGCGCGCAAACCCAACAACGGCTAC ATCTGCAAGGTCGACACCAAGACCTGGAAAGTCGTCGCCAAGTGGGATACCGGTCCTGATCCGCACACCTGCGACTGCAC CGTCGACGGCAAGTACATGACCACCGTGTACAGCGGGCACCAGGCCGGTCAGTCGGGCCTCGTGGTGATCAACATCGCCA ACGACAAGATCGAGGCGCGTCTGCCGTGTCCGGGCGGCATGCACGACCACGTCGTCGTTCCCGAAAGCTGGGAAGGCCTG AAGTACTCGCGCAGCACCTCGGTGTAA
Upstream 100 bases:
>100_bases AGAACGGCGTGATCGAGAAGGTGTTCGTGGGCCCGCAGGACTGGAACAAGAAGGGCGCCATCTGAGCTTCGCTGGTACCG ACAGAATCTAGGAGAAAGTA
Downstream 100 bases:
>100_bases GCGGCGTCCCGCCGGCGCTCTGCCGCCGGCAGGATTTTTCCGCAAGGGTTGTAACAACCAGGAGATTCCAGATGACTACG AGCGTTCAGAACCCGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MSINRRQFMKNAIAAGMAGTATMLGSRSAFSAVHDPVGEAQADLFRKFKGNVVLLPSKYGGYVQAMDLSTPETLAWYSYG LHGIDMPIPHHIAAMPSKDPYKGFDFYQTMQPPAAPYVNENSPEWRNRGDFKMFKMRYDGSGKQNSITVVNDIGETTGMS LGVHVSIGVGENANKYVAFADGQKDMVLITDIGDNPKIVKAFRADYDPVARQLNISHVFPDSTTGKFDYVGRKGMKTSHE AMLGEELMPADPTAVFVDAFTWHPTLPFGAILIRRLGCCAIVDTRTWEVVSLLSTAKGSPDNFPLVKQTGFTWTFAVPSV LTPLHEAGFVTSGEYFVACNNVLQNNIAVYRSTDENPNKWKKETFVEGFGTKYLPLHMGNVPDSRFAFFTMWARKPNNGY ICKVDTKTWKVVAKWDTGPDPHTCDCTVDGKYMTTVYSGHQAGQSGLVVINIANDKIEARLPCPGGMHDHVVVPESWEGL KYSRSTSV
Sequences:
>Translated_488_residues MSINRRQFMKNAIAAGMAGTATMLGSRSAFSAVHDPVGEAQADLFRKFKGNVVLLPSKYGGYVQAMDLSTPETLAWYSYG LHGIDMPIPHHIAAMPSKDPYKGFDFYQTMQPPAAPYVNENSPEWRNRGDFKMFKMRYDGSGKQNSITVVNDIGETTGMS LGVHVSIGVGENANKYVAFADGQKDMVLITDIGDNPKIVKAFRADYDPVARQLNISHVFPDSTTGKFDYVGRKGMKTSHE AMLGEELMPADPTAVFVDAFTWHPTLPFGAILIRRLGCCAIVDTRTWEVVSLLSTAKGSPDNFPLVKQTGFTWTFAVPSV LTPLHEAGFVTSGEYFVACNNVLQNNIAVYRSTDENPNKWKKETFVEGFGTKYLPLHMGNVPDSRFAFFTMWARKPNNGY ICKVDTKTWKVVAKWDTGPDPHTCDCTVDGKYMTTVYSGHQAGQSGLVVINIANDKIEARLPCPGGMHDHVVVPESWEGL KYSRSTSV >Mature_487_residues SINRRQFMKNAIAAGMAGTATMLGSRSAFSAVHDPVGEAQADLFRKFKGNVVLLPSKYGGYVQAMDLSTPETLAWYSYGL HGIDMPIPHHIAAMPSKDPYKGFDFYQTMQPPAAPYVNENSPEWRNRGDFKMFKMRYDGSGKQNSITVVNDIGETTGMSL GVHVSIGVGENANKYVAFADGQKDMVLITDIGDNPKIVKAFRADYDPVARQLNISHVFPDSTTGKFDYVGRKGMKTSHEA MLGEELMPADPTAVFVDAFTWHPTLPFGAILIRRLGCCAIVDTRTWEVVSLLSTAKGSPDNFPLVKQTGFTWTFAVPSVL TPLHEAGFVTSGEYFVACNNVLQNNIAVYRSTDENPNKWKKETFVEGFGTKYLPLHMGNVPDSRFAFFTMWARKPNNGYI CKVDTKTWKVVAKWDTGPDPHTCDCTVDGKYMTTVYSGHQAGQSGLVVINIANDKIEARLPCPGGMHDHVVVPESWEGLK YSRSTSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53882; Mature: 53751
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINRRQFMKNAIAAGMAGTATMLGSRSAFSAVHDPVGEAQADLFRKFKGNVVLLPSKYG CCCCHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCC GYVQAMDLSTPETLAWYSYGLHGIDMPIPHHIAAMPSKDPYKGFDFYQTMQPPAAPYVNE CEEEEEECCCCCEEEHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCC NSPEWRNRGDFKMFKMRYDGSGKQNSITVVNDIGETTGMSLGVHVSIGVGENANKYVAFA CCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEE DGQKDMVLITDIGDNPKIVKAFRADYDPVARQLNISHVFPDSTTGKFDYVGRKGMKTSHE CCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHEEEEEECCCCCCCCEEECCCCCCCCHHH AMLGEELMPADPTAVFVDAFTWHPTLPFGAILIRRLGCCAIVDTRTWEVVSLLSTAKGSP HHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCC DNFPLVKQTGFTWTFAVPSVLTPLHEAGFVTSGEYFVACNNVLQNNIAVYRSTDENPNKW CCCCEEEECCCEEEEECHHHHHHHHHCCCEECCCEEEEECHHHHCCEEEEECCCCCCCHH KKETFVEGFGTKYLPLHMGNVPDSRFAFFTMWARKPNNGYICKVDTKTWKVVAKWDTGPD HHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEECCCEEEEEEEECCCCC PHTCDCTVDGKYMTTVYSGHQAGQSGLVVINIANDKIEARLPCPGGMHDHVVVPESWEGL CCEEEEEECCCEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCEECCCCCCCC KYSRSTSV CCCCCCCC >Mature Secondary Structure SINRRQFMKNAIAAGMAGTATMLGSRSAFSAVHDPVGEAQADLFRKFKGNVVLLPSKYG CCCHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCC GYVQAMDLSTPETLAWYSYGLHGIDMPIPHHIAAMPSKDPYKGFDFYQTMQPPAAPYVNE CEEEEEECCCCCEEEHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCC NSPEWRNRGDFKMFKMRYDGSGKQNSITVVNDIGETTGMSLGVHVSIGVGENANKYVAFA CCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEE DGQKDMVLITDIGDNPKIVKAFRADYDPVARQLNISHVFPDSTTGKFDYVGRKGMKTSHE CCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHEEEEEECCCCCCCCEEECCCCCCCCHHH AMLGEELMPADPTAVFVDAFTWHPTLPFGAILIRRLGCCAIVDTRTWEVVSLLSTAKGSP HHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCC DNFPLVKQTGFTWTFAVPSVLTPLHEAGFVTSGEYFVACNNVLQNNIAVYRSTDENPNKW CCCCEEEECCCEEEEECHHHHHHHHHCCCEECCCEEEEECHHHHCCEEEEECCCCCCCHH KKETFVEGFGTKYLPLHMGNVPDSRFAFFTMWARKPNNGYICKVDTKTWKVVAKWDTGPD HHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEECCCEEEEEEEECCCCC PHTCDCTVDGKYMTTVYSGHQAGQSGLVVINIANDKIEARLPCPGGMHDHVVVPESWEGL CCEEEEEECCCEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCEECCCCCCCC KYSRSTSV CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA