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The map label for this gene is sodC2 [H]

Identifier: 74316924

GI number: 74316924

Start: 962154

End: 962732

Strand: Direct

Name: sodC2 [H]

Synonym: Tbd_0906

Alternate gene names: 74316924

Gene position: 962154-962732 (Clockwise)

Preceding gene: 74316923

Following gene: 74316925

Centisome position: 33.07

GC content: 71.16

Gene sequence:

>579_bases
ATGTCTTTCCGCACCCAATCCGCCACCCCCGTCGCCGCGCGCCGGGGCCGTCTCGTCGCCGCCGCGCTGCTGGGCGGCAC
CGCCGTGGCGTCGCTCGTCGCCCACGGTCACGGCAACATGATGACGTCGACCGCGGTGCTGGTCGCCACCTCGGGCAGCT
CGGTCAGCGGGACACTCAAGTTTCATGAAGCGCAGGACCGCGTCGTGCATATCCGCGGCACGGTCGAGGGCCTGGCGCCG
GGCAAGCACGGCTTCCACATCCACGTGAACGGCAACTGCGATTCGCCCGACGGCATGAGCGCGGGCGGCCACTACGCACC
CGCCGGCGGCCGCCACGGCGCGCCCGACGCGAAAGAGCGGCACATGGGCGACCTCGGCAACATCGTCGCCGACGCGAGCG
GCCGTGCCGAGGTCGACGTGACGGTGCAGGGCATCACGATCGCGCTGATGGGGACGGCCTCGGTCGGCGACCGCAGCATC
GTGATTCACGCCGCCGAGGACGATTTCTCCGATCCGGCCGGCAACTCGGGGGCGCGCGTGGCCTGCGGCGTGATCGAGTC
GGACATGATGCGGATGTAG

Upstream 100 bases:

>100_bases
CAAGGCGCTCCTGGCCGAGCTCGCGCAAGGCGGGTTCTGAACCGCGCTTTCCACTTTGAAACACGACGAAACATCCCCTC
GATCCCGGCAAGGAGCCACC

Downstream 100 bases:

>100_bases
GGAAGCGTCCCGGGGGGCATGGCAAGCGCGCCGCCCCGTCAGCGAGGCCAGGGTGCGTCAATTTGTCACATTCCGGCATC
GCGCGAGCGGCACTAACCTC

Product: superoxide dismutase, Cu/Zn

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSFRTQSATPVAARRGRLVAAALLGGTAVASLVAHGHGNMMTSTAVLVATSGSSVSGTLKFHEAQDRVVHIRGTVEGLAP
GKHGFHIHVNGNCDSPDGMSAGGHYAPAGGRHGAPDAKERHMGDLGNIVADASGRAEVDVTVQGITIALMGTASVGDRSI
VIHAAEDDFSDPAGNSGARVACGVIESDMMRM

Sequences:

>Translated_192_residues
MSFRTQSATPVAARRGRLVAAALLGGTAVASLVAHGHGNMMTSTAVLVATSGSSVSGTLKFHEAQDRVVHIRGTVEGLAP
GKHGFHIHVNGNCDSPDGMSAGGHYAPAGGRHGAPDAKERHMGDLGNIVADASGRAEVDVTVQGITIALMGTASVGDRSI
VIHAAEDDFSDPAGNSGARVACGVIESDMMRM
>Mature_191_residues
SFRTQSATPVAARRGRLVAAALLGGTAVASLVAHGHGNMMTSTAVLVATSGSSVSGTLKFHEAQDRVVHIRGTVEGLAPG
KHGFHIHVNGNCDSPDGMSAGGHYAPAGGRHGAPDAKERHMGDLGNIVADASGRAEVDVTVQGITIALMGTASVGDRSIV
IHAAEDDFSDPAGNSGARVACGVIESDMMRM

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI4507149, Length=153, Percent_Identity=37.9084967320261, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI4826665, Length=177, Percent_Identity=37.2881355932203, Blast_Score=97, Evalue=1e-20,
Organism=Escherichia coli, GI1787934, Length=184, Percent_Identity=32.6086956521739, Blast_Score=72, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71981876, Length=157, Percent_Identity=42.0382165605096, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71981879, Length=157, Percent_Identity=42.0382165605096, Blast_Score=101, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17554806, Length=137, Percent_Identity=45.2554744525547, Blast_Score=100, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17537871, Length=146, Percent_Identity=41.0958904109589, Blast_Score=87, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6322564, Length=156, Percent_Identity=39.7435897435897, Blast_Score=84, Evalue=1e-17,
Organism=Drosophila melanogaster, GI85725006, Length=147, Percent_Identity=41.4965986394558, Blast_Score=100, Evalue=5e-22,
Organism=Drosophila melanogaster, GI45551081, Length=147, Percent_Identity=41.4965986394558, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24652737, Length=147, Percent_Identity=41.4965986394558, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI116007680, Length=147, Percent_Identity=41.4965986394558, Blast_Score=100, Evalue=7e-22,
Organism=Drosophila melanogaster, GI17136496, Length=139, Percent_Identity=43.1654676258993, Blast_Score=95, Evalue=3e-20,
Organism=Drosophila melanogaster, GI281363087, Length=117, Percent_Identity=43.5897435897436, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24652342, Length=117, Percent_Identity=43.5897435897436, Blast_Score=73, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 19461; Mature: 19330

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS00332 SOD_CU_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRTQSATPVAARRGRLVAAALLGGTAVASLVAHGHGNMMTSTAVLVATSGSSVSGTLK
CCCCCCCCCCHHHHCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCEEEEE
FHEAQDRVVHIRGTVEGLAPGKHGFHIHVNGNCDSPDGMSAGGHYAPAGGRHGAPDAKER
EECCCCEEEEEEECEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
HMGDLGNIVADASGRAEVDVTVQGITIALMGTASVGDRSIVIHAAEDDFSDPAGNSGARV
HCCCHHHEEECCCCCEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEE
ACGVIESDMMRM
EEEEECHHHHCC
>Mature Secondary Structure 
SFRTQSATPVAARRGRLVAAALLGGTAVASLVAHGHGNMMTSTAVLVATSGSSVSGTLK
CCCCCCCCCHHHHCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCEEEEE
FHEAQDRVVHIRGTVEGLAPGKHGFHIHVNGNCDSPDGMSAGGHYAPAGGRHGAPDAKER
EECCCCEEEEEEECEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
HMGDLGNIVADASGRAEVDVTVQGITIALMGTASVGDRSIVIHAAEDDFSDPAGNSGARV
HCCCHHHEEECCCCCEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEE
ACGVIESDMMRM
EEEEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]