| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316874
Identifier: 74316874
GI number: 74316874
Start: 904908
End: 906053
Strand: Direct
Name: 74316874
Synonym: Tbd_0856
Alternate gene names: NA
Gene position: 904908-906053 (Clockwise)
Preceding gene: 74316872
Following gene: 74316875
Centisome position: 31.1
GC content: 68.24
Gene sequence:
>1146_bases ATGCGTGCGACCTGGGACGTCTTCTGCAACGTCATCGACAATTACGGCGATATCGGCATCGCGTGGCGGCTTGCCCGCGA GCTTGCGCGCCAACCCGATCTCGACGTGCGGCTGTGGGTCGACGACCTCGAAGCATTTCGACGGATCTGGCCCAGCATCG ACGCGGATCGGAGCGAGCAACTCGACGCGGGGGTGACCGTCCGCGCCTGGCGTACGCCGTTCGACGACACGGCGGCCGCC GACGTCGTGATCGAGGCCTTCGGCTGTGCGCTGCCCGAGAGCTACCTGCACGCGATGAGCGCGCGCGCGTCCGCGCCGGT CTGGATCAATCTCGAATACCTGACCGCGGAATCCTGGGCGGACGCGCATCACGGCTTGCCGTCGCCGCATCCGAGCCTGC CGCTGACCAAGCACTTCTTCTTTCCGGGTTACACCGAGGCGACCGGGGGCTTGCTGATCGAGCCTGATCTTGCCGAGAGG AGGCGTGCCTTTCTCGACGACGGCGTCGCCGATTTCTGGCGTCGGCTCGACGTCGTGTCGCCGCGGCCGGACGAACTGCG CGTGTCGCTCTTCGCCTACCAAAACGCGGCGCTGCCGGCGCTGCTCGACGCCTGGGCAGGCGACCCCGCGCCCGTGAGCT GCATCGTGCCCGAAGGCCGCGTCATTCCGCAACTCGCGGCGTGGCTCGGCGTCGCGGGCTTGCGCGCCGGCGAGACGCAC CGGCGCGGCGCGCTCCAGGTGTACGTCCTGCCCTTCCTGAGCCAGGACGATTACGACCGCTTGTTGTGGGCGTGTGCCGT CAACTTCGTGCGCGGCGAGGATTCGTGCGTGCACGCGCAACTCGCGGCGAGGCCGCTCGTGTGGCAGGCCTATCCGCAGA CAGAAGGCGCGCACGCGCAAAAGGTCGAGGCCCTGCTCGCGCGCTACAGCGAAGGTCTGGACGCAGCGTCGGCCGCCGCA ATCGGCGGACTTTGGCGGCACTGGAACGGCACCCCCGCAGCGCCGGAGCTCGCTTCCTGCTGGCGTACCTTCAGGGTGCG CCACGAGACGATGACGCGGCACGCCGACGCGTGGGCTGCGCGCCTGAGCGGGCAGGGGCGGCTGACTGGAAAGCTGTTGG AGTTTGTGGAAAAAAGGATAAAATAG
Upstream 100 bases:
>100_bases TCGTTGACTTCCGTGATTTATATGCTATCTGGGCGTTTTTTGCGGCTTCGGATCGCCCCGGGTCCCGTCGTCGGCGAGGG GCTGGGGTAGGATTCCGGCG
Downstream 100 bases:
>100_bases CGGGTTTTCTAAAATCCCCACCAGCTCTCGCAGCGGATATACAGCCATGAAAATCGCACAGGAACTCCGGGCCGGCAACG TCGTGATGATCGGGAAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MRATWDVFCNVIDNYGDIGIAWRLARELARQPDLDVRLWVDDLEAFRRIWPSIDADRSEQLDAGVTVRAWRTPFDDTAAA DVVIEAFGCALPESYLHAMSARASAPVWINLEYLTAESWADAHHGLPSPHPSLPLTKHFFFPGYTEATGGLLIEPDLAER RRAFLDDGVADFWRRLDVVSPRPDELRVSLFAYQNAALPALLDAWAGDPAPVSCIVPEGRVIPQLAAWLGVAGLRAGETH RRGALQVYVLPFLSQDDYDRLLWACAVNFVRGEDSCVHAQLAARPLVWQAYPQTEGAHAQKVEALLARYSEGLDAASAAA IGGLWRHWNGTPAAPELASCWRTFRVRHETMTRHADAWAARLSGQGRLTGKLLEFVEKRIK
Sequences:
>Translated_381_residues MRATWDVFCNVIDNYGDIGIAWRLARELARQPDLDVRLWVDDLEAFRRIWPSIDADRSEQLDAGVTVRAWRTPFDDTAAA DVVIEAFGCALPESYLHAMSARASAPVWINLEYLTAESWADAHHGLPSPHPSLPLTKHFFFPGYTEATGGLLIEPDLAER RRAFLDDGVADFWRRLDVVSPRPDELRVSLFAYQNAALPALLDAWAGDPAPVSCIVPEGRVIPQLAAWLGVAGLRAGETH RRGALQVYVLPFLSQDDYDRLLWACAVNFVRGEDSCVHAQLAARPLVWQAYPQTEGAHAQKVEALLARYSEGLDAASAAA IGGLWRHWNGTPAAPELASCWRTFRVRHETMTRHADAWAARLSGQGRLTGKLLEFVEKRIK >Mature_381_residues MRATWDVFCNVIDNYGDIGIAWRLARELARQPDLDVRLWVDDLEAFRRIWPSIDADRSEQLDAGVTVRAWRTPFDDTAAA DVVIEAFGCALPESYLHAMSARASAPVWINLEYLTAESWADAHHGLPSPHPSLPLTKHFFFPGYTEATGGLLIEPDLAER RRAFLDDGVADFWRRLDVVSPRPDELRVSLFAYQNAALPALLDAWAGDPAPVSCIVPEGRVIPQLAAWLGVAGLRAGETH RRGALQVYVLPFLSQDDYDRLLWACAVNFVRGEDSCVHAQLAARPLVWQAYPQTEGAHAQKVEALLARYSEGLDAASAAA IGGLWRHWNGTPAAPELASCWRTFRVRHETMTRHADAWAARLSGQGRLTGKLLEFVEKRIK
Specific function: Unknown
COG id: COG4394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42437; Mature: 42437
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRATWDVFCNVIDNYGDIGIAWRLARELARQPDLDVRLWVDDLEAFRRIWPSIDADRSEQ CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCCCHH LDAGVTVRAWRTPFDDTAAADVVIEAFGCALPESYLHAMSARASAPVWINLEYLTAESWA CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEECCHHH DAHHGLPSPHPSLPLTKHFFFPGYTEATGGLLIEPDLAERRRAFLDDGVADFWRRLDVVS HHHCCCCCCCCCCCCCCEECCCCCCCCCCCEEECCCHHHHHHHHHCCCHHHHHHHHCCCC PRPDELRVSLFAYQNAALPALLDAWAGDPAPVSCIVPEGRVIPQLAAWLGVAGLRAGETH CCCCHHEEEEEEECCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCC RRGALQVYVLPFLSQDDYDRLLWACAVNFVRGEDSCVHAQLAARPLVWQAYPQTEGAHAQ CCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEECCCCCCCHHH KVEALLARYSEGLDAASAAAIGGLWRHWNGTPAAPELASCWRTFRVRHETMTRHADAWAA HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RLSGQGRLTGKLLEFVEKRIK HHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRATWDVFCNVIDNYGDIGIAWRLARELARQPDLDVRLWVDDLEAFRRIWPSIDADRSEQ CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCCCHH LDAGVTVRAWRTPFDDTAAADVVIEAFGCALPESYLHAMSARASAPVWINLEYLTAESWA CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEECCHHH DAHHGLPSPHPSLPLTKHFFFPGYTEATGGLLIEPDLAERRRAFLDDGVADFWRRLDVVS HHHCCCCCCCCCCCCCCEECCCCCCCCCCCEEECCCHHHHHHHHHCCCHHHHHHHHCCCC PRPDELRVSLFAYQNAALPALLDAWAGDPAPVSCIVPEGRVIPQLAAWLGVAGLRAGETH CCCCHHEEEEEEECCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCC RRGALQVYVLPFLSQDDYDRLLWACAVNFVRGEDSCVHAQLAARPLVWQAYPQTEGAHAQ CCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEECCCCCCCHHH KVEALLARYSEGLDAASAAAIGGLWRHWNGTPAAPELASCWRTFRVRHETMTRHADAWAA HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RLSGQGRLTGKLLEFVEKRIK HHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA