| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316866
Identifier: 74316866
GI number: 74316866
Start: 896951
End: 898039
Strand: Reverse
Name: 74316866
Synonym: Tbd_0848
Alternate gene names: NA
Gene position: 898039-896951 (Counterclockwise)
Preceding gene: 74316868
Following gene: 74316859
Centisome position: 30.86
GC content: 66.02
Gene sequence:
>1089_bases TTGCTTAACCCGGCGATCTCATGCAGACAAAATGGCCTGTTCGGGCCCGGGCTTTTAGACCTGAGCGAAGTGACAGCAAC GGGTCGAGAGCGTCCGGTCACCGATGATTCCAGGCCGGCCAAGATAAAACGCGGCGGGGAAGGCAGTAAGAAGAGCCCAT TAGCGCCTGCGAGTCCTTCAGCGACAATTCAGGCCCCTGGATTCCGCGCTCCCGTCCCTGGCACGCCGGGATGGACTTCC CCTCCACTCATGCCCCCCGTCAGCTACCGGTTGCTGTTGGCCCTCGCGCTCTCGCTGGGGGCTCATACCAGCCTGCTGGT GCTGGGCAAGGTGCAGGCGGTTCCTCCTCCGCCCGCGGCAACAGAGGAACCATTACGGGTCGATCTCACCCTGGTGCCCG CGCAGCCGGTAAAGCCCGCCCGGCCCGCCCCTGCGACGCCCCGTCTAGAAACAAAACCCACAAAGCCCGTTCACGCGCCC GAGATGCCCTCGCCTCCCGCGGACGAGAAGACGCCTGCGGAGCTGGCCGCGCCGCCCGCCCCGACAGCCGAGGAATGGGC GCTCGCCTCGACCTACACGCCCAAGAACAGCAAGCGCTACCGTTACGCCTGGGGCCAGCAGGTGCGCAGCATGATGGGGA CGGCGATCGAGGGCGAGCGGCAGGGGATGGTGCGCTTGCGGATCGAGATCGCGCCCGACGGCAAGCTGGTGAAGGCGGAC GTGCTGTGGTCGACGTCGGAGATCGCGGAGACGCTCGCGCTGCAGGCGATCCGCTCGATGCCATCATTGCCGCGGACGCC AACGGGGAAACCTCTGGTGTTCGAGAAGACGATTTCGCTCATGCCCTTCGAGACCGGCTGGCCGCCGATCTACAAGTACG ACTGTCTGCCCGATCCGCCGTCTTTCAGCAACCGGTTCGCGTGGGACGGCTCGTCGCCGCAGCCTGCTTCTCGGGCGCCT CGAGAAAATACGGCCGCATCACGCGAGGCCGCGCCGACCGAATGTCCCGACGCCGGACCGGACTCGATCGAGGCCGAGGA AAAGGATATGGAACGCCAGTTCAAGGAGTGGGGCTCGCTCGGCGAGTGA
Upstream 100 bases:
>100_bases CCGGCACCGCCTTCCTTGTAGCCCGGTATCGTGGTAACCATCTCCGGAGCAAACCGGCACCCGTCCTTGCCATCTGCTTC CTCCGGGTAGATCAGGGCCA
Downstream 100 bases:
>100_bases GCTATTTGAGCCGGTCCGCGAATTTCTGCTCGGCCTTCGCGACCTTGGGTGCGACGACATACTGGCAATACGGCTGCCGC GGGTTGGCCTCGTAGTAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MLNPAISCRQNGLFGPGLLDLSEVTATGRERPVTDDSRPAKIKRGGEGSKKSPLAPASPSATIQAPGFRAPVPGTPGWTS PPLMPPVSYRLLLALALSLGAHTSLLVLGKVQAVPPPPAATEEPLRVDLTLVPAQPVKPARPAPATPRLETKPTKPVHAP EMPSPPADEKTPAELAAPPAPTAEEWALASTYTPKNSKRYRYAWGQQVRSMMGTAIEGERQGMVRLRIEIAPDGKLVKAD VLWSTSEIAETLALQAIRSMPSLPRTPTGKPLVFEKTISLMPFETGWPPIYKYDCLPDPPSFSNRFAWDGSSPQPASRAP RENTAASREAAPTECPDAGPDSIEAEEKDMERQFKEWGSLGE
Sequences:
>Translated_362_residues MLNPAISCRQNGLFGPGLLDLSEVTATGRERPVTDDSRPAKIKRGGEGSKKSPLAPASPSATIQAPGFRAPVPGTPGWTS PPLMPPVSYRLLLALALSLGAHTSLLVLGKVQAVPPPPAATEEPLRVDLTLVPAQPVKPARPAPATPRLETKPTKPVHAP EMPSPPADEKTPAELAAPPAPTAEEWALASTYTPKNSKRYRYAWGQQVRSMMGTAIEGERQGMVRLRIEIAPDGKLVKAD VLWSTSEIAETLALQAIRSMPSLPRTPTGKPLVFEKTISLMPFETGWPPIYKYDCLPDPPSFSNRFAWDGSSPQPASRAP RENTAASREAAPTECPDAGPDSIEAEEKDMERQFKEWGSLGE >Mature_362_residues MLNPAISCRQNGLFGPGLLDLSEVTATGRERPVTDDSRPAKIKRGGEGSKKSPLAPASPSATIQAPGFRAPVPGTPGWTS PPLMPPVSYRLLLALALSLGAHTSLLVLGKVQAVPPPPAATEEPLRVDLTLVPAQPVKPARPAPATPRLETKPTKPVHAP EMPSPPADEKTPAELAAPPAPTAEEWALASTYTPKNSKRYRYAWGQQVRSMMGTAIEGERQGMVRLRIEIAPDGKLVKAD VLWSTSEIAETLALQAIRSMPSLPRTPTGKPLVFEKTISLMPFETGWPPIYKYDCLPDPPSFSNRFAWDGSSPQPASRAP RENTAASREAAPTECPDAGPDSIEAEEKDMERQFKEWGSLGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38860; Mature: 38860
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNPAISCRQNGLFGPGLLDLSEVTATGRERPVTDDSRPAKIKRGGEGSKKSPLAPASPS CCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC ATIQAPGFRAPVPGTPGWTSPPLMPPVSYRLLLALALSLGAHTSLLVLGKVQAVPPPPAA CEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCC TEEPLRVDLTLVPAQPVKPARPAPATPRLETKPTKPVHAPEMPSPPADEKTPAELAAPPA CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC PTAEEWALASTYTPKNSKRYRYAWGQQVRSMMGTAIEGERQGMVRLRIEIAPDGKLVKAD CCHHHHEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEE VLWSTSEIAETLALQAIRSMPSLPRTPTGKPLVFEKTISLMPFETGWPPIYKYDCLPDPP EEECHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHEECCCCCCCCCCEEECCCCCCC SFSNRFAWDGSSPQPASRAPRENTAASREAAPTECPDAGPDSIEAEEKDMERQFKEWGSL CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC GE CC >Mature Secondary Structure MLNPAISCRQNGLFGPGLLDLSEVTATGRERPVTDDSRPAKIKRGGEGSKKSPLAPASPS CCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC ATIQAPGFRAPVPGTPGWTSPPLMPPVSYRLLLALALSLGAHTSLLVLGKVQAVPPPPAA CEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCC TEEPLRVDLTLVPAQPVKPARPAPATPRLETKPTKPVHAPEMPSPPADEKTPAELAAPPA CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC PTAEEWALASTYTPKNSKRYRYAWGQQVRSMMGTAIEGERQGMVRLRIEIAPDGKLVKAD CCHHHHEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEE VLWSTSEIAETLALQAIRSMPSLPRTPTGKPLVFEKTISLMPFETGWPPIYKYDCLPDPP EEECHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHEECCCCCCCCCCEEECCCCCCC SFSNRFAWDGSSPQPASRAPRENTAASREAAPTECPDAGPDSIEAEEKDMERQFKEWGSL CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC GE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA