| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is msrA [H]
Identifier: 74316865
GI number: 74316865
Start: 896416
End: 896949
Strand: Direct
Name: msrA [H]
Synonym: Tbd_0847
Alternate gene names: 74316865
Gene position: 896416-896949 (Clockwise)
Preceding gene: 74316864
Following gene: 74316867
Centisome position: 30.81
GC content: 62.55
Gene sequence:
>534_bases ATGGCGCATGAAATCGCAACGCTGGCGGGCGGCTGCTTCTGGTGCATCGAGACCGTCTTCAATCGCCTGCAAGGCGTCGA ATCCGCCGTCTCGGGCTACATGGGCGGGCATACCGAAACGCCCAGCTACGAAGCCGTCTGCAACGGCGACACCGGCCACG CTGAAGTCGTACAGATCACGTTCGACCCCGACGTGATTTCCTATCGCGACCTGCTCGATGTCTTCTTCACGATCCACGAC CCGACCCAGCTCAACCGGCAAGGCAACGACGTCGGCACGCAATACCGCTCGGCGATCTTCTGGCATACGCCCGCGCAGAA GGCCGAAGCCGAAGCTGCAATCGCGGCCCTCGACGCATCGAAACAATACGGCTCGCCCGTCGTCACCGAAGTCGCCGAGG CGACGACGTTCTACCCCGCCGAGACCTATCACCAGCGCTACTACGAGGCCAACCCGCGGCAGCCGTATTGCCAGTATGTC GTCGCACCCAAGGTCGCGAAGGCCGAGCAGAAATTCGCGGACCGGCTCAAATAG
Upstream 100 bases:
>100_bases TGATGACGCGCGCCTCGTTCAAGGATTCGGTGCCCGTCGCCTGAGTCGCATGGCCGCGCCGTTCGCGGACGGCGCGAATT CCACTTCGCGGGAGTCGATC
Downstream 100 bases:
>100_bases CTCACTCGCCGAGCGAGCCCCACTCCTTGAACTGGCGTTCCATATCCTTTTCCTCGGCCTCGATCGAGTCCGGTCCGGCG TCGGGACATTCGGTCGGCGC
Product: methionine sulfoxide reductase A
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MAHEIATLAGGCFWCIETVFNRLQGVESAVSGYMGGHTETPSYEAVCNGDTGHAEVVQITFDPDVISYRDLLDVFFTIHD PTQLNRQGNDVGTQYRSAIFWHTPAQKAEAEAAIAALDASKQYGSPVVTEVAEATTFYPAETYHQRYYEANPRQPYCQYV VAPKVAKAEQKFADRLK
Sequences:
>Translated_177_residues MAHEIATLAGGCFWCIETVFNRLQGVESAVSGYMGGHTETPSYEAVCNGDTGHAEVVQITFDPDVISYRDLLDVFFTIHD PTQLNRQGNDVGTQYRSAIFWHTPAQKAEAEAAIAALDASKQYGSPVVTEVAEATTFYPAETYHQRYYEANPRQPYCQYV VAPKVAKAEQKFADRLK >Mature_176_residues AHEIATLAGGCFWCIETVFNRLQGVESAVSGYMGGHTETPSYEAVCNGDTGHAEVVQITFDPDVISYRDLLDVFFTIHDP TQLNRQGNDVGTQYRSAIFWHTPAQKAEAEAAIAALDASKQYGSPVVTEVAEATTFYPAETYHQRYYEANPRQPYCQYVV APKVAKAEQKFADRLK
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=159, Percent_Identity=44.6540880503145, Blast_Score=137, Evalue=6e-33, Organism=Homo sapiens, GI208609995, Length=159, Percent_Identity=44.6540880503145, Blast_Score=137, Evalue=6e-33, Organism=Homo sapiens, GI208609993, Length=113, Percent_Identity=46.0176991150442, Blast_Score=99, Evalue=3e-21, Organism=Escherichia coli, GI1790665, Length=152, Percent_Identity=52.6315789473684, Blast_Score=154, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17533973, Length=145, Percent_Identity=33.7931034482759, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6320881, Length=162, Percent_Identity=39.5061728395062, Blast_Score=116, Evalue=2e-27, Organism=Drosophila melanogaster, GI24664627, Length=166, Percent_Identity=34.3373493975904, Blast_Score=96, Evalue=9e-21, Organism=Drosophila melanogaster, GI45553131, Length=161, Percent_Identity=34.1614906832298, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI24664631, Length=166, Percent_Identity=33.7349397590361, Blast_Score=92, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 19650; Mature: 19519
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHEIATLAGGCFWCIETVFNRLQGVESAVSGYMGGHTETPSYEAVCNGDTGHAEVVQIT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEEEE FDPDVISYRDLLDVFFTIHDPTQLNRQGNDVGTQYRSAIFWHTPAQKAEAEAAIAALDAS ECCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHHHHCH KQYGSPVVTEVAEATTFYPAETYHQRYYEANPRQPYCQYVVAPKVAKAEQKFADRLK HHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHEECCCHHHHHHHHHHHHCC >Mature Secondary Structure AHEIATLAGGCFWCIETVFNRLQGVESAVSGYMGGHTETPSYEAVCNGDTGHAEVVQIT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEEEE FDPDVISYRDLLDVFFTIHDPTQLNRQGNDVGTQYRSAIFWHTPAQKAEAEAAIAALDAS ECCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHHHHCH KQYGSPVVTEVAEATTFYPAETYHQRYYEANPRQPYCQYVVAPKVAKAEQKFADRLK HHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]