| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316838
Identifier: 74316838
GI number: 74316838
Start: 862180
End: 863709
Strand: Direct
Name: 74316838
Synonym: Tbd_0820
Alternate gene names: NA
Gene position: 862180-863709 (Clockwise)
Preceding gene: 74316837
Following gene: 74316839
Centisome position: 29.63
GC content: 66.54
Gene sequence:
>1530_bases ATGAGAAAACATCGCGCTGCCGTTCTGGGGATTGTCTGCTCCGGTTTCATGCTGACCGCTTCGGCCGCCGACCCGGCGCG CCTGTCCGACGGTCGACTCGAGGACGCGGTGGAGGACGTGCAGACGCCGCGCACGCCTGCGGTGACGCGGCCCGAGCAGA AGCTCAACGCGCACGACCGCTCGGGTGATTTCGTCGCGCCCAGCGCCAAGCCGTCGTCGCCTGCGTTCCGGAACCAGCCT GACAAGGGCAAGGTGCTCGGCTTCGATTTCGCGCGCGATCCGCTGAACGCGAAGGCGCCGATGCAGACCTTCCAGGAGAC GATGAAGGCCGACATCGACGCGCTGCCCAAGGTCAAGGCGACTCAGCGCGCGCTGCTCGAGGAGCGCTACAACCTGACGC CGCGGCTCGACCCGAGCGCGAAAATGTCGCGCGGCAAGCCGCTGCCGGTCGGGCCGACCGCGCGCCTCGCGCGGGGGCTG AGCTGGGAGAAGCTCGCCGAGATGAAGCCGGAGGAGATCCGCGACCAGGGCGCGTTTCCGTATCCCTCGCTGCCGCACCC CAAGCAGTCGACGGGCGGCCAGGTCTTCCCGCAGATCCAGATCGACCAGTTCCCGCGGCTGCAGCGTTTCGACGTCGAGT TCGACCTGCCCGACGCCTTCCTGCCCGAGTTCCCGCCGGCGATCTTTCTGCAGAACCGGCCCGAGCTCGGCGACGTCTCG CGCGGCGAAGTCGTGTCGATCAACAACTTCCACCGCCTGTTCAAGGATCTCGTGACGCCGGTGCAGCTCGACGGGCTGCG CCTGCTGGTGACGCCTTTCGCGCAGGAGGAGTTCAACGCGACCGACGACCGCAAGGTCAAGCGCCCGAGCCTCGGCGTCG CGTGCATGGACTGCCACGTCAACGGCCACACCACGGCGCAGTTCCACCTCAATCCCGACACGCGCCCGCAGGAACGCCGC ATGCGGCTCGACACGACGAGCCTGCGCGGGCTCTTCAACCAGCAGATCCACGGTTCGAAGCGCAGCCTGCGCTCGGTCGA GGACTTCACCGAGTTCGAGTTCCGCACGGCCTACTTCAACGGCGACCCGATCCACGCGATGAAGAAGGGGATCACGATCT TCGACCGCATCCAGGTCAGCCACATGGCGCAGATGCAGAACATGTTCGACTTTCCGCCCGCGCCGAAACTCAGTGCAGAA GGGCAGCTCGACGCGGCCAAGGCGACGCCGGCCGAATTGCGCGGGCGTGACGTGTTCTTCAACAAGGGCCGTTGCGCCTC GTGCCACACGCCGCCGGGCTACCTCGACCACCAGATGCACGACCTCAAGCTCGAGCGCTTCGTCAACGAGCCCGGCGACG GGCCGATGAAGACCTTCACGCTGCGCGGCATCAAGGACAGCCCGCCCTACCTGCACGACGGGCGCCTGCTCACGCTCGAG GACACGGTTGAATTCTTCAACCTCGTGCTCGGCACGAAGCTGACCAAGGAAGAGAAATCCGATCTCGTGGCCTTCATGCG CCAGCTCTGA
Upstream 100 bases:
>100_bases GAATCCCGCGCGGCGCGCGGCTTTCGCGCGCTTGTAAACGCATGCTTGCGCTCTATCGTTCTTAAGGTCGTCCGCCAGGG TCAACCCGTTCGAGGGTCTT
Downstream 100 bases:
>100_bases TTTTCGCGCCAGCTGGGCCCTGGCTCGGGGGCCGGGCGGCTACACGCCGCTTCAATAACAGGGAGGGGGAATCATGCCGA GAACAGCATCGTCGACCGTG
Product: cytochrome c peroxidase
Products: NA
Alternate protein names: Cytochrome C Hsc; Cytochrome C; Cytochrome; Cytochrome C Peroxidase-Like Protein; Cytochrome-C Peroxidase; Cytochrome C Catalase CCC
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MRKHRAAVLGIVCSGFMLTASAADPARLSDGRLEDAVEDVQTPRTPAVTRPEQKLNAHDRSGDFVAPSAKPSSPAFRNQP DKGKVLGFDFARDPLNAKAPMQTFQETMKADIDALPKVKATQRALLEERYNLTPRLDPSAKMSRGKPLPVGPTARLARGL SWEKLAEMKPEEIRDQGAFPYPSLPHPKQSTGGQVFPQIQIDQFPRLQRFDVEFDLPDAFLPEFPPAIFLQNRPELGDVS RGEVVSINNFHRLFKDLVTPVQLDGLRLLVTPFAQEEFNATDDRKVKRPSLGVACMDCHVNGHTTAQFHLNPDTRPQERR MRLDTTSLRGLFNQQIHGSKRSLRSVEDFTEFEFRTAYFNGDPIHAMKKGITIFDRIQVSHMAQMQNMFDFPPAPKLSAE GQLDAAKATPAELRGRDVFFNKGRCASCHTPPGYLDHQMHDLKLERFVNEPGDGPMKTFTLRGIKDSPPYLHDGRLLTLE DTVEFFNLVLGTKLTKEEKSDLVAFMRQL
Sequences:
>Translated_509_residues MRKHRAAVLGIVCSGFMLTASAADPARLSDGRLEDAVEDVQTPRTPAVTRPEQKLNAHDRSGDFVAPSAKPSSPAFRNQP DKGKVLGFDFARDPLNAKAPMQTFQETMKADIDALPKVKATQRALLEERYNLTPRLDPSAKMSRGKPLPVGPTARLARGL SWEKLAEMKPEEIRDQGAFPYPSLPHPKQSTGGQVFPQIQIDQFPRLQRFDVEFDLPDAFLPEFPPAIFLQNRPELGDVS RGEVVSINNFHRLFKDLVTPVQLDGLRLLVTPFAQEEFNATDDRKVKRPSLGVACMDCHVNGHTTAQFHLNPDTRPQERR MRLDTTSLRGLFNQQIHGSKRSLRSVEDFTEFEFRTAYFNGDPIHAMKKGITIFDRIQVSHMAQMQNMFDFPPAPKLSAE GQLDAAKATPAELRGRDVFFNKGRCASCHTPPGYLDHQMHDLKLERFVNEPGDGPMKTFTLRGIKDSPPYLHDGRLLTLE DTVEFFNLVLGTKLTKEEKSDLVAFMRQL >Mature_509_residues MRKHRAAVLGIVCSGFMLTASAADPARLSDGRLEDAVEDVQTPRTPAVTRPEQKLNAHDRSGDFVAPSAKPSSPAFRNQP DKGKVLGFDFARDPLNAKAPMQTFQETMKADIDALPKVKATQRALLEERYNLTPRLDPSAKMSRGKPLPVGPTARLARGL SWEKLAEMKPEEIRDQGAFPYPSLPHPKQSTGGQVFPQIQIDQFPRLQRFDVEFDLPDAFLPEFPPAIFLQNRPELGDVS RGEVVSINNFHRLFKDLVTPVQLDGLRLLVTPFAQEEFNATDDRKVKRPSLGVACMDCHVNGHTTAQFHLNPDTRPQERR MRLDTTSLRGLFNQQIHGSKRSLRSVEDFTEFEFRTAYFNGDPIHAMKKGITIFDRIQVSHMAQMQNMFDFPPAPKLSAE GQLDAAKATPAELRGRDVFFNKGRCASCHTPPGYLDHQMHDLKLERFVNEPGDGPMKTFTLRGIKDSPPYLHDGRLLTLE DTVEFFNLVLGTKLTKEEKSDLVAFMRQL
Specific function: Unknown
COG id: COG1858
COG function: function code P; Cytochrome c peroxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57265; Mature: 57265
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKHRAAVLGIVCSGFMLTASAADPARLSDGRLEDAVEDVQTPRTPAVTRPEQKLNAHDR CCCHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCC SGDFVAPSAKPSSPAFRNQPDKGKVLGFDFARDPLNAKAPMQTFQETMKADIDALPKVKA CCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH TQRALLEERYNLTPRLDPSAKMSRGKPLPVGPTARLARGLSWEKLAEMKPEEIRDQGAFP HHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHCCCCHHHHHHCCCHHHHHCCCCC YPSLPHPKQSTGGQVFPQIQIDQFPRLQRFDVEFDLPDAFLPEFPPAIFLQNRPELGDVS CCCCCCCCCCCCCEECEEEECCCCCCCCCCCEEECCCHHHCCCCCCEEEECCCCCCCCCC RGEVVSINNFHRLFKDLVTPVQLDGLRLLVTPFAQEEFNATDDRKVKRPSLGVACMDCHV CCCEEECHHHHHHHHHHCCCEECCCEEEEEECCCHHHCCCCCCCCCCCCCCCEEEEEEEC NGHTTAQFHLNPDTRPQERRMRLDTTSLRGLFNQQIHGSKRSLRSVEDFTEFEFRTAYFN CCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEEC GDPIHAMKKGITIFDRIQVSHMAQMQNMFDFPPAPKLSAEGQLDAAKATPAELRGRDVFF CCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEE NKGRCASCHTPPGYLDHQMHDLKLERFVNEPGDGPMKTFTLRGIKDSPPYLHDGRLLTLE CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEECCEEEEHH DTVEFFNLVLGTKLTKEEKSDLVAFMRQL HHHHHHHHHHCCCCCHHHHHHHHHHHHHC >Mature Secondary Structure MRKHRAAVLGIVCSGFMLTASAADPARLSDGRLEDAVEDVQTPRTPAVTRPEQKLNAHDR CCCHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCC SGDFVAPSAKPSSPAFRNQPDKGKVLGFDFARDPLNAKAPMQTFQETMKADIDALPKVKA CCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH TQRALLEERYNLTPRLDPSAKMSRGKPLPVGPTARLARGLSWEKLAEMKPEEIRDQGAFP HHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHCCCCHHHHHHCCCHHHHHCCCCC YPSLPHPKQSTGGQVFPQIQIDQFPRLQRFDVEFDLPDAFLPEFPPAIFLQNRPELGDVS CCCCCCCCCCCCCEECEEEECCCCCCCCCCCEEECCCHHHCCCCCCEEEECCCCCCCCCC RGEVVSINNFHRLFKDLVTPVQLDGLRLLVTPFAQEEFNATDDRKVKRPSLGVACMDCHV CCCEEECHHHHHHHHHHCCCEECCCEEEEEECCCHHHCCCCCCCCCCCCCCCEEEEEEEC NGHTTAQFHLNPDTRPQERRMRLDTTSLRGLFNQQIHGSKRSLRSVEDFTEFEFRTAYFN CCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEEC GDPIHAMKKGITIFDRIQVSHMAQMQNMFDFPPAPKLSAEGQLDAAKATPAELRGRDVFF CCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEE NKGRCASCHTPPGYLDHQMHDLKLERFVNEPGDGPMKTFTLRGIKDSPPYLHDGRLLTLE CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEECCEEEEHH DTVEFFNLVLGTKLTKEEKSDLVAFMRQL HHHHHHHHHHCCCCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA