Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316822

Identifier: 74316822

GI number: 74316822

Start: 845549

End: 846757

Strand: Reverse

Name: 74316822

Synonym: Tbd_0804

Alternate gene names: NA

Gene position: 846757-845549 (Counterclockwise)

Preceding gene: 74316827

Following gene: 74316821

Centisome position: 29.1

GC content: 67.25

Gene sequence:

>1209_bases
ATGGAAACTCCCCAAAACGCGCATTCTGAAGCAAAGGTCCCCGCGACGGAAGCCGTGATCCGCGTCGTGACGCGCATCGC
GGCGCTGTCGGCCGAGGCGTGGAACACGCTCGCCGGCGACTCGCCTTTCGTGCAGCACGCCTTCCTCGACGCACTGGAAA
CCAGCGGCTGCGTCGACGCATCGCTCGGCTGGGAACCCGTTCACCTCGCGCTCTTTCGCGATGGCCGGCTCGACGCCGCA
ATGCCGCTCTACGTCAAGCATCACTCCTGGGGCGAGTTCGTCTTCGACTGGGCCTGGGCCGACGCCTATCGTCGCGAGGG
CCTCGCCTACTATCCCAAGCTCGTCTGCTGCGTGCCCTTCTCCCCCGTCGCCGGCCCGCGCCTGCTGGCGCGCAGCGACG
AGGATCGCGCCGCCCTGCTCACCGCGGCGCAGACGCTCACGCGCGACCTCGGCGCCTCGTCCTTCCATGTGCTGTTCCCG
TCCGAGGCCGACCACGCGGCGCTCGCGGCGTCGCCGCTGCTGCATCGCACCGGCTTCCAGTTCCACTGGCATGCGTCCGC
CGAGGGCGACGAGGCTCGCTACGCCAGCTTCGACGACTTCCTCGCCGCACTCACCCACGACAAGCGCAAGAAGATCCGCC
AGGAAAGGAAGAAGCTCGCGAATCTCGGCATACGCTTCCGCTGGGTCGAAGGGCGGCAAAGCAGCGACGCCGACTGGGAC
TTCTTCTACCGCTGCTACGCCGACACCTATGCCCGTCATCGCAGCGAGCCGCACCTCAACCGAGCGTTCTTCGCGACGCT
GCGCGAGAAGGCACCGGAGTCGCTGCTCCTCATCATCGCCGAGCGCGACAACGTGCCGGTCGCCTGCTCGTTCTGCATGA
AGGACGGCCGGCGGCTGTACGGCCGCCATTGGGGCGCGCTGGAATACGTGCCCGGCCTGCATTTCGAGACCTGCTACCAA
CAGGGCATCGAATACGCGATCGCCCAGGGTCTGCAGGTATTCGAAGGTGGTGCCCAGGGCGAACACAAGCTCGCACGCGG
CCTCACGCCGACGCCGACCCATTCCTGGCACTGGCTCGAGAACGCCGAATTCCGCAAGGCCGTCGACCGCTTCCTCGAGC
GCGAGACCGACGCCATCGGGCACTACATCGACGAGTTGGACGGACCCTTCCGCCACCCGCCGCCACCGTCTACAGTGGGG
AAGACCTAG

Upstream 100 bases:

>100_bases
GCGGCGTCGGCGCTCGTCGCAGCGATGCCGCGCGGCGTGTTAAGGTTGCTCGACCGCAAGACTTGTTTGGCCTGGTATTC
GTGCAGGTTCATCGCTGTTG

Downstream 100 bases:

>100_bases
TCCCTGTCGCCGTCAGATTCGCCGCAGCAGCCGCGGCTGCGTGTTCGCACGCGCCATTGTCGACCCCCCCCCCGGACCCA
AGAATAGGAGCCAGCCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
METPQNAHSEAKVPATEAVIRVVTRIAALSAEAWNTLAGDSPFVQHAFLDALETSGCVDASLGWEPVHLALFRDGRLDAA
MPLYVKHHSWGEFVFDWAWADAYRREGLAYYPKLVCCVPFSPVAGPRLLARSDEDRAALLTAAQTLTRDLGASSFHVLFP
SEADHAALAASPLLHRTGFQFHWHASAEGDEARYASFDDFLAALTHDKRKKIRQERKKLANLGIRFRWVEGRQSSDADWD
FFYRCYADTYARHRSEPHLNRAFFATLREKAPESLLLIIAERDNVPVACSFCMKDGRRLYGRHWGALEYVPGLHFETCYQ
QGIEYAIAQGLQVFEGGAQGEHKLARGLTPTPTHSWHWLENAEFRKAVDRFLERETDAIGHYIDELDGPFRHPPPPSTVG
KT

Sequences:

>Translated_402_residues
METPQNAHSEAKVPATEAVIRVVTRIAALSAEAWNTLAGDSPFVQHAFLDALETSGCVDASLGWEPVHLALFRDGRLDAA
MPLYVKHHSWGEFVFDWAWADAYRREGLAYYPKLVCCVPFSPVAGPRLLARSDEDRAALLTAAQTLTRDLGASSFHVLFP
SEADHAALAASPLLHRTGFQFHWHASAEGDEARYASFDDFLAALTHDKRKKIRQERKKLANLGIRFRWVEGRQSSDADWD
FFYRCYADTYARHRSEPHLNRAFFATLREKAPESLLLIIAERDNVPVACSFCMKDGRRLYGRHWGALEYVPGLHFETCYQ
QGIEYAIAQGLQVFEGGAQGEHKLARGLTPTPTHSWHWLENAEFRKAVDRFLERETDAIGHYIDELDGPFRHPPPPSTVG
KT
>Mature_402_residues
METPQNAHSEAKVPATEAVIRVVTRIAALSAEAWNTLAGDSPFVQHAFLDALETSGCVDASLGWEPVHLALFRDGRLDAA
MPLYVKHHSWGEFVFDWAWADAYRREGLAYYPKLVCCVPFSPVAGPRLLARSDEDRAALLTAAQTLTRDLGASSFHVLFP
SEADHAALAASPLLHRTGFQFHWHASAEGDEARYASFDDFLAALTHDKRKKIRQERKKLANLGIRFRWVEGRQSSDADWD
FFYRCYADTYARHRSEPHLNRAFFATLREKAPESLLLIIAERDNVPVACSFCMKDGRRLYGRHWGALEYVPGLHFETCYQ
QGIEYAIAQGLQVFEGGAQGEHKLARGLTPTPTHSWHWLENAEFRKAVDRFLERETDAIGHYIDELDGPFRHPPPPSTVG
KT

Specific function: Unknown

COG id: COG3146

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45360; Mature: 45360

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPQNAHSEAKVPATEAVIRVVTRIAALSAEAWNTLAGDSPFVQHAFLDALETSGCVDA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEC
SLGWEPVHLALFRDGRLDAAMPLYVKHHSWGEFVFDWAWADAYRREGLAYYPKLVCCVPF
CCCCCEEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECC
SPVAGPRLLARSDEDRAALLTAAQTLTRDLGASSFHVLFPSEADHAALAASPLLHRTGFQ
CCCCCCHHEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCE
FHWHASAEGDEARYASFDDFLAALTHDKRKKIRQERKKLANLGIRFRWVEGRQSSDADWD
EEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHH
FFYRCYADTYARHRSEPHLNRAFFATLREKAPESLLLIIAERDNVPVACSFCMKDGRRLY
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEHHHHHHCCHHHH
GRHWGALEYVPGLHFETCYQQGIEYAIAQGLQVFEGGAQGEHKLARGLTPTPTHSWHWLE
HCCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCC
NAEFRKAVDRFLERETDAIGHYIDELDGPFRHPPPPSTVGKT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
METPQNAHSEAKVPATEAVIRVVTRIAALSAEAWNTLAGDSPFVQHAFLDALETSGCVDA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEC
SLGWEPVHLALFRDGRLDAAMPLYVKHHSWGEFVFDWAWADAYRREGLAYYPKLVCCVPF
CCCCCEEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECC
SPVAGPRLLARSDEDRAALLTAAQTLTRDLGASSFHVLFPSEADHAALAASPLLHRTGFQ
CCCCCCHHEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCE
FHWHASAEGDEARYASFDDFLAALTHDKRKKIRQERKKLANLGIRFRWVEGRQSSDADWD
EEEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHH
FFYRCYADTYARHRSEPHLNRAFFATLREKAPESLLLIIAERDNVPVACSFCMKDGRRLY
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEHHHHHHCCHHHH
GRHWGALEYVPGLHFETCYQQGIEYAIAQGLQVFEGGAQGEHKLARGLTPTPTHSWHWLE
HCCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCC
NAEFRKAVDRFLERETDAIGHYIDELDGPFRHPPPPSTVGKT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA