| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316820
Identifier: 74316820
GI number: 74316820
Start: 843511
End: 844512
Strand: Direct
Name: 74316820
Synonym: Tbd_0802
Alternate gene names: NA
Gene position: 843511-844512 (Clockwise)
Preceding gene: 74316818
Following gene: 74316823
Centisome position: 28.99
GC content: 63.97
Gene sequence:
>1002_bases ATGCTTTTTCTCGAACTCCTCGGCTATCTGCTGCTCATCCTCGTTGCGGCGGAAATCTTTGTCAACGCGCTCGAGCACCT AGGGGAAAAACTGCGCATCTCCGAAGGGGTGACCGGTTCGCTGTTCGCCGCGGTCGGCACGGCGATGCCTGAAACGCTCG TGCCGCTGCTCGCGATTTTCGCCGGCACGGGCAACGCGACGACCAACGAGGAGATCGGCGTCGGCGCGATTCTCGGCGCC CCGCTGATGCTCTCGACGCTGTCGCTGTTCCTCATGAGCGTCGCTGTGCTCGGACGGCGCGGCCTGCGCGGCCACCTCAC ACCCGAAAAGACCGGCCTCAAGCGCGATCTCGATTTCTTCCTGATGGCCTTCGTGCTGGCCTTCGTCGCGATGTTCGTGC CACACACGCAAAGCTGGGCGCGCGGCGCGCTCGCCTTCGTCATGGTGATGATCTACTTTTTCTACGTCATGCTCACCTTG CGTGCGTCGAGCAAGCTCGTCGACGAGGGCCACGCGACCGAGGCCGGCTCGCCCATGCTGCTGACCCGGCTGGGCATGCC GCAGAACCTGCTCTTCATCATCGTGCAGCTCGCGCTCGGCCTGGGCTTGCTCGTTGCCGGCGCCAAGGGTTTCATCCACG GCGTCGAGGCCGCCGCGCCGATCATTGGCATCTCCGCCTTGCTGCTCTCGCTGATGATCATCCCGATCGCCACCGAACTG CCCGAAAAGGTCAATTCGATCCTGTGGATACGCAAGCACAAGGACACATTGGCCTTCGGCAACATCACCGGCGCGATGGT GTTCCAGGGCACGCTGCTGCCTGCGATCGGCATCTCGCTGACGCCCTGGGCGCCGCAGAAGGAAGTGCTGCTCGGTGTGC TGGTCACGCTCGTCGCCGCGTTCTGGCTGCGCTGGGCGGCAGTCACCGGAGGCCTGCGGGTCTGGCACCTGTTCGTGAAC GGCGCGCTGTACATCACCTATCTCACCGTGGTGCTGGCTTAA
Upstream 100 bases:
>100_bases TGCGATCCGGTGATGGAAATCGCCCTCAGTGAGGCGTTCGAAAGCGCGGACGGCGGAGGCGCCGCTGGTAGAATCGCGCT TTCGCTCCGGACGCCCGCCC
Downstream 100 bases:
>100_bases TCAGCAAACGGCGGGGCGCCCGCCAACCTTCGGCCGGTCAGCGACGAGGCGCGCGCCGTCGCGCGACGCCACCGACCAGG GCCAGGCCGCTCAGCATCAT
Product: Ca2+/H+ antiporter
Products: NA
Alternate protein names: Ca2+/Na+ Antiporter; Sodium/Calcium Antiporter; Sodium/Calcium Exchanger Protein; Sodium/Calcium Exchanger; Cation Antiporter; Na+/Ca+ Exchanger Protein; Ca2+Cation Antiporter CaCA Family; Sodium/Calcium Exchanger Family Protein; Ca2+/H+ Antiporter
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MLFLELLGYLLLILVAAEIFVNALEHLGEKLRISEGVTGSLFAAVGTAMPETLVPLLAIFAGTGNATTNEEIGVGAILGA PLMLSTLSLFLMSVAVLGRRGLRGHLTPEKTGLKRDLDFFLMAFVLAFVAMFVPHTQSWARGALAFVMVMIYFFYVMLTL RASSKLVDEGHATEAGSPMLLTRLGMPQNLLFIIVQLALGLGLLVAGAKGFIHGVEAAAPIIGISALLLSLMIIPIATEL PEKVNSILWIRKHKDTLAFGNITGAMVFQGTLLPAIGISLTPWAPQKEVLLGVLVTLVAAFWLRWAAVTGGLRVWHLFVN GALYITYLTVVLA
Sequences:
>Translated_333_residues MLFLELLGYLLLILVAAEIFVNALEHLGEKLRISEGVTGSLFAAVGTAMPETLVPLLAIFAGTGNATTNEEIGVGAILGA PLMLSTLSLFLMSVAVLGRRGLRGHLTPEKTGLKRDLDFFLMAFVLAFVAMFVPHTQSWARGALAFVMVMIYFFYVMLTL RASSKLVDEGHATEAGSPMLLTRLGMPQNLLFIIVQLALGLGLLVAGAKGFIHGVEAAAPIIGISALLLSLMIIPIATEL PEKVNSILWIRKHKDTLAFGNITGAMVFQGTLLPAIGISLTPWAPQKEVLLGVLVTLVAAFWLRWAAVTGGLRVWHLFVN GALYITYLTVVLA >Mature_333_residues MLFLELLGYLLLILVAAEIFVNALEHLGEKLRISEGVTGSLFAAVGTAMPETLVPLLAIFAGTGNATTNEEIGVGAILGA PLMLSTLSLFLMSVAVLGRRGLRGHLTPEKTGLKRDLDFFLMAFVLAFVAMFVPHTQSWARGALAFVMVMIYFFYVMLTL RASSKLVDEGHATEAGSPMLLTRLGMPQNLLFIIVQLALGLGLLVAGAKGFIHGVEAAAPIIGISALLLSLMIIPIATEL PEKVNSILWIRKHKDTLAFGNITGAMVFQGTLLPAIGISLTPWAPQKEVLLGVLVTLVAAFWLRWAAVTGGLRVWHLFVN GALYITYLTVVLA
Specific function: Unknown
COG id: COG0530
COG function: function code P; Ca2+/Na+ antiporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35719; Mature: 35719
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLELLGYLLLILVAAEIFVNALEHLGEKLRISEGVTGSLFAAVGTAMPETLVPLLAIF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHH AGTGNATTNEEIGVGAILGAPLMLSTLSLFLMSVAVLGRRGLRGHLTPEKTGLKRDLDFF HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH LMAFVLAFVAMFVPHTQSWARGALAFVMVMIYFFYVMLTLRASSKLVDEGHATEAGSPML HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH LTRLGMPQNLLFIIVQLALGLGLLVAGAKGFIHGVEAAAPIIGISALLLSLMIIPIATEL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PEKVNSILWIRKHKDTLAFGNITGAMVFQGTLLPAIGISLTPWAPQKEVLLGVLVTLVAA HHHHHHHEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH FWLRWAAVTGGLRVWHLFVNGALYITYLTVVLA HHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHC >Mature Secondary Structure MLFLELLGYLLLILVAAEIFVNALEHLGEKLRISEGVTGSLFAAVGTAMPETLVPLLAIF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHH AGTGNATTNEEIGVGAILGAPLMLSTLSLFLMSVAVLGRRGLRGHLTPEKTGLKRDLDFF HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH LMAFVLAFVAMFVPHTQSWARGALAFVMVMIYFFYVMLTLRASSKLVDEGHATEAGSPML HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH LTRLGMPQNLLFIIVQLALGLGLLVAGAKGFIHGVEAAAPIIGISALLLSLMIIPIATEL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PEKVNSILWIRKHKDTLAFGNITGAMVFQGTLLPAIGISLTPWAPQKEVLLGVLVTLVAA HHHHHHHEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH FWLRWAAVTGGLRVWHLFVNGALYITYLTVVLA HHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA