| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316791
Identifier: 74316791
GI number: 74316791
Start: 818033
End: 819289
Strand: Reverse
Name: 74316791
Synonym: Tbd_0773
Alternate gene names: NA
Gene position: 819289-818033 (Counterclockwise)
Preceding gene: 74316792
Following gene: 74316790
Centisome position: 28.16
GC content: 69.29
Gene sequence:
>1257_bases ATGAGACGCTTCCTGGCCTGGAGCCTCGCACTGCTTCTGCTGCTCGGCGTGACCGTGTTGCCCTGGATGATGCTGGACGA CGCACCGGCGGTCGAACCGGTCGGCGAGTTCCGCCGCAAGGATCTCGCGTGGATCAAGTCGCTGTTCCAGAAACACGATC CGCGACGCCAGACCCCCGACGTGGTCCACAGCATCCGGCTCGACGAATCCGAACTCAACCGCCTTCTCAACTACGCGGTG GAACTGCACCGCGTGACCGGCATCGCCGCCGAACTCACGCCCGGGGGCGCGACGCTGACCGCGACGCTGACCGCGCCGCG CAATCCCTTCGGGGCCTACCTCAACGTCACGGCCGAGGTCGCCGAGGCGCCGGGCGGCGTCCGCATCGAAAGCCTGCAGC TCGGCAGCCTGCCGGTTCCGGGCGTGATCGCCGACTGGATCGCACGCCGCGTCCACGCGCGGCTGCGCCGCGACGAGACC TACGCCGCCCTGGCCGACGCGTTTTATCGCGTCAATTTCGACGAGAACCAGGCGACGCTCGACTACCGATGGCGGCCCGA ACTGCTTACCGAAATCGAGCAGAAAAGCGTCGAGATCCTGGTCCCGCCGGCCGACCAGGCACGCATGCTCGACTATGCGC AATACCTCGACGGCCTGCTCAAGCGCCACCGGGAAGGCAGCACGGTGCCACTCGTGCAGGTGGTCGCGCCGCTGTTCGAG CACGCCCGGCGCGCCGGCGGCGACCCGCGCGAGCATAATCGCGCCGCGCTCACGGCGATCGCGGCGCACCTGTCCGGCAT CAGTCTCGCCAAGCTACTCGAGGGTGAGGGCCGCTCGATACGGCGCAGTCCGCGCGTGCTGCTCTCGCTGCACGGCAGGC GCGATTTCGCCGAGCATTTCATCATTTCGGCGGCGCTGTCGGCCAATGGCGGCAGCCGGCTCGCCAACGCGATCGGCCTG ATCAAGGAGGAGGAAGACGCGAACCGGGGCTCGGGCTTCAGCTTCACCGACCTTGCCGCCAACCGCGCTGGCGTGCGGCT CGGCGACCGCGCCACCGGCGAGCCGGCCGCACGCGTGCTGCAGCACCTCGCGGCGGCACGAAACGACGACGCGCTGCTGC CGGACTTCCGCGATCTGCCCGAATTCATGGCGCAGGCCGAGTTCGATCGGCGTTTCGGCCCGGTCGGGGGGCCGCGCTAC CTGGCCGTGATCGAGCGCATCGACGCGCGCCTCGCCGCACATCCGCTCACCAGATAG
Upstream 100 bases:
>100_bases CGGGCGATGCAGGACGTCGGGCTCGACGCCGCGCTACAGCAGGAACTGACCGCTGCGCTTTTCCAGACGGCGGACTTCAT GCGTAACCAGCCGCAGTGAC
Downstream 100 bases:
>100_bases CAAAAACCCGGTTATAATGCCGGGTTTCCCGCAAGCCTGCCGACCGCTCGAATCGAGTGGAACTGCCCCGCACTGAAGGC CGGAAGCGGATTTCCACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MRRFLAWSLALLLLLGVTVLPWMMLDDAPAVEPVGEFRRKDLAWIKSLFQKHDPRRQTPDVVHSIRLDESELNRLLNYAV ELHRVTGIAAELTPGGATLTATLTAPRNPFGAYLNVTAEVAEAPGGVRIESLQLGSLPVPGVIADWIARRVHARLRRDET YAALADAFYRVNFDENQATLDYRWRPELLTEIEQKSVEILVPPADQARMLDYAQYLDGLLKRHREGSTVPLVQVVAPLFE HARRAGGDPREHNRAALTAIAAHLSGISLAKLLEGEGRSIRRSPRVLLSLHGRRDFAEHFIISAALSANGGSRLANAIGL IKEEEDANRGSGFSFTDLAANRAGVRLGDRATGEPAARVLQHLAAARNDDALLPDFRDLPEFMAQAEFDRRFGPVGGPRY LAVIERIDARLAAHPLTR
Sequences:
>Translated_418_residues MRRFLAWSLALLLLLGVTVLPWMMLDDAPAVEPVGEFRRKDLAWIKSLFQKHDPRRQTPDVVHSIRLDESELNRLLNYAV ELHRVTGIAAELTPGGATLTATLTAPRNPFGAYLNVTAEVAEAPGGVRIESLQLGSLPVPGVIADWIARRVHARLRRDET YAALADAFYRVNFDENQATLDYRWRPELLTEIEQKSVEILVPPADQARMLDYAQYLDGLLKRHREGSTVPLVQVVAPLFE HARRAGGDPREHNRAALTAIAAHLSGISLAKLLEGEGRSIRRSPRVLLSLHGRRDFAEHFIISAALSANGGSRLANAIGL IKEEEDANRGSGFSFTDLAANRAGVRLGDRATGEPAARVLQHLAAARNDDALLPDFRDLPEFMAQAEFDRRFGPVGGPRY LAVIERIDARLAAHPLTR >Mature_418_residues MRRFLAWSLALLLLLGVTVLPWMMLDDAPAVEPVGEFRRKDLAWIKSLFQKHDPRRQTPDVVHSIRLDESELNRLLNYAV ELHRVTGIAAELTPGGATLTATLTAPRNPFGAYLNVTAEVAEAPGGVRIESLQLGSLPVPGVIADWIARRVHARLRRDET YAALADAFYRVNFDENQATLDYRWRPELLTEIEQKSVEILVPPADQARMLDYAQYLDGLLKRHREGSTVPLVQVVAPLFE HARRAGGDPREHNRAALTAIAAHLSGISLAKLLEGEGRSIRRSPRVLLSLHGRRDFAEHFIISAALSANGGSRLANAIGL IKEEEDANRGSGFSFTDLAANRAGVRLGDRATGEPAARVLQHLAAARNDDALLPDFRDLPEFMAQAEFDRRFGPVGGPRY LAVIERIDARLAAHPLTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46221; Mature: 46221
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFLAWSLALLLLLGVTVLPWMMLDDAPAVEPVGEFRRKDLAWIKSLFQKHDPRRQTPD CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH VVHSIRLDESELNRLLNYAVELHRVTGIAAELTPGGATLTATLTAPRNPFGAYLNVTAEV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCHHEEEEHHH AEAPGGVRIESLQLGSLPVPGVIADWIARRVHARLRRDETYAALADAFYRVNFDENQATL HCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEE DYRWRPELLTEIEQKSVEILVPPADQARMLDYAQYLDGLLKRHREGSTVPLVQVVAPLFE EEECCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH HARRAGGDPREHNRAALTAIAAHLSGISLAKLLEGEGRSIRRSPRVLLSLHGRRDFAEHF HHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHCCCCEEEEECCCHHHHHHH IISAALSANGGSRLANAIGLIKEEEDANRGSGFSFTDLAANRAGVRLGDRATGEPAARVL HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCHHHHHH QHLAAARNDDALLPDFRDLPEFMAQAEFDRRFGPVGGPRYLAVIERIDARLAAHPLTR HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRRFLAWSLALLLLLGVTVLPWMMLDDAPAVEPVGEFRRKDLAWIKSLFQKHDPRRQTPD CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH VVHSIRLDESELNRLLNYAVELHRVTGIAAELTPGGATLTATLTAPRNPFGAYLNVTAEV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCHHEEEEHHH AEAPGGVRIESLQLGSLPVPGVIADWIARRVHARLRRDETYAALADAFYRVNFDENQATL HCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEE DYRWRPELLTEIEQKSVEILVPPADQARMLDYAQYLDGLLKRHREGSTVPLVQVVAPLFE EEECCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH HARRAGGDPREHNRAALTAIAAHLSGISLAKLLEGEGRSIRRSPRVLLSLHGRRDFAEHF HHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHCCCCEEEEECCCHHHHHHH IISAALSANGGSRLANAIGLIKEEEDANRGSGFSFTDLAANRAGVRLGDRATGEPAARVL HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCHHHHHH QHLAAARNDDALLPDFRDLPEFMAQAEFDRRFGPVGGPRYLAVIERIDARLAAHPLTR HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA