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The map label for this gene is rmuC [H]

Identifier: 74316788

GI number: 74316788

Start: 813554

End: 814846

Strand: Reverse

Name: rmuC [H]

Synonym: Tbd_0770

Alternate gene names: 74316788

Gene position: 814846-813554 (Counterclockwise)

Preceding gene: 74316790

Following gene: 74316787

Centisome position: 28.0

GC content: 67.05

Gene sequence:

>1293_bases
ATGCCAGCCTTCGAAATCGCCCTCCTGATTGGACTCGCCGTCCTCCTCGCCGTCAGCGTGATCCTGCTCGTGCGGCTCCA
GTCCCTGCGCCGCGACCAGCAGGCCCTGCCCGCCCAGCTCGTGCACGACATGGAAGCGCGCCATCGCGCGGTGCTGAGCG
ATCTCCACGGCGGGCTCACCCAGCAGTCCGACCGCATGCAGGCCCAGTTCGCCGCGCTGCAGGTCGCGCAGACCGAGCGT
CTGGCCGACACACGCGCCGGGGTCAGCGAACACCTCGGCCAGTTCCAGACCGCGATGCTCGAGAAGCTGATCGAGCAGGG
CCGCGCCGAGCAGGCGCTGCTGCAGGACACGCTCAAAGGCATGAGCGCGCAGTTCGGCGAACGCGTCCAGCAGCTGTCGC
AGACCGTCGACGGCCGCCTCAACGAAATTTCGGGCAAGGTCGCCGAACGGCTCGACGAGGGCTTCAAGAAGACCAACGAC
ACCTTCACCTCGGTGATGACGCGGCTGGCCGTCATCGACGAGGCGCAAAAGAAGATCGAGGGCCTCGCGAGCAACGTCGT
GAGCCTGCAGGAAATCCTCGGCGACAAGCGCTCGCGCGGCGCGTTCGGCGAGGTGCAACTCGAGGCGCTGGTTCGCAACA
GCCTGCCGCCCGACGCCTACGCCTTCCAGCACACCTTGAAGGGCGGCGCCCGCGCCGACTGCGTGCTGATCCTGCCGGAA
CCGACCGGCACCGTCTGCGTCGACGCCAAGTTCCCCCTCGAAAACTACAGCCGCATGTTCGACGACGCGCTGCCGGCCGC
AGAACGCGAGGCGGCACGGCGCCAGTTCAAGATGGACGTCCGAAAGCACGTCGACGACATCGGCACGAAGTACGTCGTCG
CCGGCGAGACCTCCGATGGCGCGGTGATGTTCCTGCCGGCCGAGGCGGTGTTCGCCGAAATCCACGCCTACCACCCCGAT
CTCGTCGAACACGCGCAGAAGAAGCGGGTCTGGCTGACCTCGCCGACGACGCTGATGGCCGTGCTCAACACCGCGCGCGC
GGTGATCCGCGATTCCGAGACGCGGCGCATGGCGCACGTCATCAAGGACGAACTCGCGAAACTCGCCAAGGACTTTGCGC
GCTTCGACGAGCGCATGAAGAAGCTCGCCACGCACATCGAACAGGCGAGCAAGGACGTCGGCGACGTGCGCATCTCGAGC
GACAAGATCACCAAGCGCTTTGCGCAGATCGAGCGGGTCGAGCTCGAGCACCCCGACGCGGTGACGGCCCGCCTGCTCGA
CGCCGACGAATGA

Upstream 100 bases:

>100_bases
CGCAACATCCGTGTTTTCTTGATCTCCGCGTCTAGCCATAGAAGATTCAAGGGCGACAAGTTACCAAATGGCGTCATCGC
GAGCAGGTAGAATTCACGCC

Downstream 100 bases:

>100_bases
GCTGGTTCGCGCGCTGGCGTCGCGAGCGCATCCTCCGCACCCACCTCGTTCCCGAACCGGTCTTCGACGACGCGGTCGCG
CGCCTTCCAATCCTGCAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MPAFEIALLIGLAVLLAVSVILLVRLQSLRRDQQALPAQLVHDMEARHRAVLSDLHGGLTQQSDRMQAQFAALQVAQTER
LADTRAGVSEHLGQFQTAMLEKLIEQGRAEQALLQDTLKGMSAQFGERVQQLSQTVDGRLNEISGKVAERLDEGFKKTND
TFTSVMTRLAVIDEAQKKIEGLASNVVSLQEILGDKRSRGAFGEVQLEALVRNSLPPDAYAFQHTLKGGARADCVLILPE
PTGTVCVDAKFPLENYSRMFDDALPAAEREAARRQFKMDVRKHVDDIGTKYVVAGETSDGAVMFLPAEAVFAEIHAYHPD
LVEHAQKKRVWLTSPTTLMAVLNTARAVIRDSETRRMAHVIKDELAKLAKDFARFDERMKKLATHIEQASKDVGDVRISS
DKITKRFAQIERVELEHPDAVTARLLDADE

Sequences:

>Translated_430_residues
MPAFEIALLIGLAVLLAVSVILLVRLQSLRRDQQALPAQLVHDMEARHRAVLSDLHGGLTQQSDRMQAQFAALQVAQTER
LADTRAGVSEHLGQFQTAMLEKLIEQGRAEQALLQDTLKGMSAQFGERVQQLSQTVDGRLNEISGKVAERLDEGFKKTND
TFTSVMTRLAVIDEAQKKIEGLASNVVSLQEILGDKRSRGAFGEVQLEALVRNSLPPDAYAFQHTLKGGARADCVLILPE
PTGTVCVDAKFPLENYSRMFDDALPAAEREAARRQFKMDVRKHVDDIGTKYVVAGETSDGAVMFLPAEAVFAEIHAYHPD
LVEHAQKKRVWLTSPTTLMAVLNTARAVIRDSETRRMAHVIKDELAKLAKDFARFDERMKKLATHIEQASKDVGDVRISS
DKITKRFAQIERVELEHPDAVTARLLDADE
>Mature_429_residues
PAFEIALLIGLAVLLAVSVILLVRLQSLRRDQQALPAQLVHDMEARHRAVLSDLHGGLTQQSDRMQAQFAALQVAQTERL
ADTRAGVSEHLGQFQTAMLEKLIEQGRAEQALLQDTLKGMSAQFGERVQQLSQTVDGRLNEISGKVAERLDEGFKKTNDT
FTSVMTRLAVIDEAQKKIEGLASNVVSLQEILGDKRSRGAFGEVQLEALVRNSLPPDAYAFQHTLKGGARADCVLILPEP
TGTVCVDAKFPLENYSRMFDDALPAAEREAARRQFKMDVRKHVDDIGTKYVVAGETSDGAVMFLPAEAVFAEIHAYHPDL
VEHAQKKRVWLTSPTTLMAVLNTARAVIRDSETRRMAHVIKDELAKLAKDFARFDERMKKLATHIEQASKDVGDVRISSD
KITKRFAQIERVELEHPDAVTARLLDADE

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=268, Percent_Identity=27.6119402985075, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 47735; Mature: 47604

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFEIALLIGLAVLLAVSVILLVRLQSLRRDQQALPAQLVHDMEARHRAVLSDLHGGLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QQSDRMQAQFAALQVAQTERLADTRAGVSEHLGQFQTAMLEKLIEQGRAEQALLQDTLKG
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MSAQFGERVQQLSQTVDGRLNEISGKVAERLDEGFKKTNDTFTSVMTRLAVIDEAQKKIE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GLASNVVSLQEILGDKRSRGAFGEVQLEALVRNSLPPDAYAFQHTLKGGARADCVLILPE
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEC
PTGTVCVDAKFPLENYSRMFDDALPAAEREAARRQFKMDVRKHVDDIGTKYVVAGETSDG
CCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
AVMFLPAEAVFAEIHAYHPDLVEHAQKKRVWLTSPTTLMAVLNTARAVIRDSETRRMAHV
EEEEEEHHHHHHHHHHCCCHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHCHHHHHHHHH
IKDELAKLAKDFARFDERMKKLATHIEQASKDVGDVRISSDKITKRFAQIERVELEHPDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHCCCCCH
VTARLLDADE
HHHHHHCCCC
>Mature Secondary Structure 
PAFEIALLIGLAVLLAVSVILLVRLQSLRRDQQALPAQLVHDMEARHRAVLSDLHGGLT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QQSDRMQAQFAALQVAQTERLADTRAGVSEHLGQFQTAMLEKLIEQGRAEQALLQDTLKG
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MSAQFGERVQQLSQTVDGRLNEISGKVAERLDEGFKKTNDTFTSVMTRLAVIDEAQKKIE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GLASNVVSLQEILGDKRSRGAFGEVQLEALVRNSLPPDAYAFQHTLKGGARADCVLILPE
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEC
PTGTVCVDAKFPLENYSRMFDDALPAAEREAARRQFKMDVRKHVDDIGTKYVVAGETSDG
CCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
AVMFLPAEAVFAEIHAYHPDLVEHAQKKRVWLTSPTTLMAVLNTARAVIRDSETRRMAHV
EEEEEEHHHHHHHHHHCCCHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHCHHHHHHHHH
IKDELAKLAKDFARFDERMKKLATHIEQASKDVGDVRISSDKITKRFAQIERVELEHPDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHCCCCCH
VTARLLDADE
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]