| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316764
Identifier: 74316764
GI number: 74316764
Start: 790288
End: 791802
Strand: Direct
Name: 74316764
Synonym: Tbd_0746
Alternate gene names: NA
Gene position: 790288-791802 (Clockwise)
Preceding gene: 74316761
Following gene: 74316766
Centisome position: 27.16
GC content: 70.96
Gene sequence:
>1515_bases ATGACCGCTATCTTTGAAATGCTCGGCGCGATCACGCGCCGCAGAAAGGCCGAGGGTGGATCGCCGTTCGCGTCGCCGAA GGCGACCGAGCGGTGGCTCAAGCACCTGCACGCCGACTCGGACTACGACGCGCATCACCTGCTCGTCGAGGGGCTCGAGC GTTTCAACGCCGAGAACGCGGCGCCGTCGGTCGCGCGCCTCGATTCGCTGAGCCGGCTCGAAGACGCCGGCCTGCCGCTG CAGTCGCGCATCGTCGAGCAGTACGTGCGCAACCAGGCGACCTTCCGCCTGGCGCGCCAGGCCCTGTGGCGCGAGTCCTG GATGTTCTGGTCGCTGCTCGCCGAAGCCTGGCTCGGACTGCTCAAGGAAGCCTACCGGCGCGCGGCGAGCGAAGAACTCA AGGCGCAGCGTCCCGCCATCGCGGCACGGGCCCTGCGCTACGCCGGGCTGGTCATGCGCTGGGAATATCACCAGGCACGC ACGCCGGCGGAATCGGCGTGGCGCCGCCTGCACAAGATCTATCGCCTGGTCGAACGCGACGGCTACGCGCGGCACGTGCT GACGCTCGCGGGGCACGGCACGAGCTGCGTACGGGAATACACGCTCACGGTGCTGATGGGGCTGGTCAATCCGCTCGGCT ACCGCGCGCAGGAGATCGAGGCGATCGCGCGCATTCTCGAGGCCTACCCGTCCTTGCCGCTTCCGAGCCCGGTCGCGATC GACGGCGTGCACACGCATCGCGTCGATCTTTCGCTCGGCGAAGGCGCGGCGGTTCTCGACAAGGACGGCGTGCCCGGCCG CCGCCTGCGCTACTTCGCGCTCGCGCCGTTGGTCAGGCATCTGAAAGCCTTCGACGCCGGCTCGGGGCCGGAGGCCGACG GCATGCACGCGCTCACCTGCCAGGCGGCGAGCCTGATCGAGCGTGGCGGCGTCCGGCGCAGCCGCCAGCGTACCCAACGC TTCGGGCGCGTCTGGGTCGCCGCTGGGATGGAGCGGGTGCTGAGTGCGCTCGCGCACGCCGATCCCGCGCCGGCGCGCCC GGCGCTCGAGCCCTGGATGCTGCGCGACGAAAGCTGCGAGGGCATGGGCTTCGCGCTCGGCGAGCCGGCGGCGCTGCCGC ACGGCCGCCTCGTCGCCGTGACCTGGGACCCCGGCGAAAACGTCTGGCAACTGCTGGCCGTCCGCTGGAGCCGAGACGAG GGCGGCCAGCACCTGATCGGCACCGAGCGGCTGTCGCGCCATCCCAAGCGGGTCCAGGTCTATTTCGAGGCGGACGTCGC CGACGTGCCGAGCGAACAGGTCTCGGCGGTATTCCTGCCGATGGCGCCGAGCGAAGGCGGCAGCAGCCATCTACTGCTTC CCCGCACACACTACCGGCTGGGCGCCGCGATGATGCTGCGTGAAGGCGAGGCCGTCTACCGCCTGCGCCTCGGCGAGGTG CAGGAAAGCCACGAGGACTGGCTGCGCGTCGGGATGGACGTCGTCGGCCGGGAGCAGCTCGCGGCCGCGGCCTGA
Upstream 100 bases:
>100_bases GAAAACCGGAAATGGAACAGGGGCATGGCCGACGCGGACCGGACGAGAGCGTCTGGCATGGATGGTGCAGTGAACGGGTT CCGGAGGAGGATGCCCGTCG
Downstream 100 bases:
>100_bases AACCGCGGGTCAGCGGGTGCGGATGTCGCCGAAGTGGAAGTCGAAGGCGCCGGCCTTGCGGTCTTTGAAATACTGCTCGA GCGTCGCCTGCACGGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MTAIFEMLGAITRRRKAEGGSPFASPKATERWLKHLHADSDYDAHHLLVEGLERFNAENAAPSVARLDSLSRLEDAGLPL QSRIVEQYVRNQATFRLARQALWRESWMFWSLLAEAWLGLLKEAYRRAASEELKAQRPAIAARALRYAGLVMRWEYHQAR TPAESAWRRLHKIYRLVERDGYARHVLTLAGHGTSCVREYTLTVLMGLVNPLGYRAQEIEAIARILEAYPSLPLPSPVAI DGVHTHRVDLSLGEGAAVLDKDGVPGRRLRYFALAPLVRHLKAFDAGSGPEADGMHALTCQAASLIERGGVRRSRQRTQR FGRVWVAAGMERVLSALAHADPAPARPALEPWMLRDESCEGMGFALGEPAALPHGRLVAVTWDPGENVWQLLAVRWSRDE GGQHLIGTERLSRHPKRVQVYFEADVADVPSEQVSAVFLPMAPSEGGSSHLLLPRTHYRLGAAMMLREGEAVYRLRLGEV QESHEDWLRVGMDVVGREQLAAAA
Sequences:
>Translated_504_residues MTAIFEMLGAITRRRKAEGGSPFASPKATERWLKHLHADSDYDAHHLLVEGLERFNAENAAPSVARLDSLSRLEDAGLPL QSRIVEQYVRNQATFRLARQALWRESWMFWSLLAEAWLGLLKEAYRRAASEELKAQRPAIAARALRYAGLVMRWEYHQAR TPAESAWRRLHKIYRLVERDGYARHVLTLAGHGTSCVREYTLTVLMGLVNPLGYRAQEIEAIARILEAYPSLPLPSPVAI DGVHTHRVDLSLGEGAAVLDKDGVPGRRLRYFALAPLVRHLKAFDAGSGPEADGMHALTCQAASLIERGGVRRSRQRTQR FGRVWVAAGMERVLSALAHADPAPARPALEPWMLRDESCEGMGFALGEPAALPHGRLVAVTWDPGENVWQLLAVRWSRDE GGQHLIGTERLSRHPKRVQVYFEADVADVPSEQVSAVFLPMAPSEGGSSHLLLPRTHYRLGAAMMLREGEAVYRLRLGEV QESHEDWLRVGMDVVGREQLAAAA >Mature_503_residues TAIFEMLGAITRRRKAEGGSPFASPKATERWLKHLHADSDYDAHHLLVEGLERFNAENAAPSVARLDSLSRLEDAGLPLQ SRIVEQYVRNQATFRLARQALWRESWMFWSLLAEAWLGLLKEAYRRAASEELKAQRPAIAARALRYAGLVMRWEYHQART PAESAWRRLHKIYRLVERDGYARHVLTLAGHGTSCVREYTLTVLMGLVNPLGYRAQEIEAIARILEAYPSLPLPSPVAID GVHTHRVDLSLGEGAAVLDKDGVPGRRLRYFALAPLVRHLKAFDAGSGPEADGMHALTCQAASLIERGGVRRSRQRTQRF GRVWVAAGMERVLSALAHADPAPARPALEPWMLRDESCEGMGFALGEPAALPHGRLVAVTWDPGENVWQLLAVRWSRDEG GQHLIGTERLSRHPKRVQVYFEADVADVPSEQVSAVFLPMAPSEGGSSHLLLPRTHYRLGAAMMLREGEAVYRLRLGEVQ ESHEDWLRVGMDVVGREQLAAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56205; Mature: 56074
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIFEMLGAITRRRKAEGGSPFASPKATERWLKHLHADSDYDAHHLLVEGLERFNAENA CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC APSVARLDSLSRLEDAGLPLQSRIVEQYVRNQATFRLARQALWRESWMFWSLLAEAWLGL CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKEAYRRAASEELKAQRPAIAARALRYAGLVMRWEYHQARTPAESAWRRLHKIYRLVERD HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEEEEHHHHCCCHHHHHHHHHHHHHHHHCC GYARHVLTLAGHGTSCVREYTLTVLMGLVNPLGYRAQEIEAIARILEAYPSLPLPSPVAI CCHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEE DGVHTHRVDLSLGEGAAVLDKDGVPGRRLRYFALAPLVRHLKAFDAGSGPEADGMHALTC CCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH QAASLIERGGVRRSRQRTQRFGRVWVAAGMERVLSALAHADPAPARPALEPWMLRDESCE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GMGFALGEPAALPHGRLVAVTWDPGENVWQLLAVRWSRDEGGQHLIGTERLSRHPKRVQV CCCEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEECCHHHHCCCCEEEE YFEADVADVPSEQVSAVFLPMAPSEGGSSHLLLPRTHYRLGAAMMLREGEAVYRLRLGEV EEECCCCCCCCHHHCEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHCCCCEEEEHHHHH QESHEDWLRVGMDVVGREQLAAAA HHHHHHHHHHHHHHHCHHHHHHCC >Mature Secondary Structure TAIFEMLGAITRRRKAEGGSPFASPKATERWLKHLHADSDYDAHHLLVEGLERFNAENA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC APSVARLDSLSRLEDAGLPLQSRIVEQYVRNQATFRLARQALWRESWMFWSLLAEAWLGL CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKEAYRRAASEELKAQRPAIAARALRYAGLVMRWEYHQARTPAESAWRRLHKIYRLVERD HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEEEEHHHHCCCHHHHHHHHHHHHHHHHCC GYARHVLTLAGHGTSCVREYTLTVLMGLVNPLGYRAQEIEAIARILEAYPSLPLPSPVAI CCHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEE DGVHTHRVDLSLGEGAAVLDKDGVPGRRLRYFALAPLVRHLKAFDAGSGPEADGMHALTC CCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH QAASLIERGGVRRSRQRTQRFGRVWVAAGMERVLSALAHADPAPARPALEPWMLRDESCE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GMGFALGEPAALPHGRLVAVTWDPGENVWQLLAVRWSRDEGGQHLIGTERLSRHPKRVQV CCCEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEECCHHHHCCCCEEEE YFEADVADVPSEQVSAVFLPMAPSEGGSSHLLLPRTHYRLGAAMMLREGEAVYRLRLGEV EEECCCCCCCCHHHCEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHCCCCEEEEHHHHH QESHEDWLRVGMDVVGREQLAAAA HHHHHHHHHHHHHHHCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA