Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316763

Identifier: 74316763

GI number: 74316763

Start: 788923

End: 789993

Strand: Reverse

Name: 74316763

Synonym: Tbd_0745

Alternate gene names: NA

Gene position: 789993-788923 (Counterclockwise)

Preceding gene: 74316765

Following gene: 74316762

Centisome position: 27.15

GC content: 72.46

Gene sequence:

>1071_bases
ATGAGCGCGTACCCCGCCCGCGCGACGCCCCCGCGGAACGCGCCGTCCGACCCGCGCGCGAGTGCGCCCGAGGGCCTCAA
CTACATCGGCGCCGGCACGCCGGGCATCCGGCGGGTGCGCCGCGGCGCGCGCTTCGTCTACCTCGACCCGGACGGCCGGC
GCATCCGGGACCGCGAGGAAATCGCACGCATCGCCCGGCTCGCGATCCCGCCGGCCTACGTCGACGTCTGGATCTGCGCC
GATCCGCGCGGGCACCTGCAGGCGACCGGGCGCGACGCGCGGGGACGCAAGCAGTACCGCTACCATCCGGCGTGGATCGC
GGCGCGCGGCACCGACAAGTACTGCCGCATGCTCGGCTTCGGCCACGCGCTGCCGAAGCTGCGCGCGGCGATCGCGGCCC
ATCTCGACGCGCCGGGGCTGGCGGCCGACAAGGTCATGGCGACCGTCGTCGCCCTGCTCGAACAGACGCTGATCCGGGTC
GGCAACCCGCAATACGCGCGCGAGAACGCGTCCTTCGGGCTGACCACGCTGCAGAACCGGCACGTCGCGGTGCGCGGCAG
CGCCGTGCAGTTTCGCTTCACCGGCAAGAGCGGCATCAAACATTGCCGCACGCTCGAGCATCCCCGCCTCGCGCGCATCC
TCAAGCGTTGCCAGGAGCTGCCCGGGCAGCAGCTTTTTCAATATCTCGACACCGACGGCCACCCGCGGCCGGTGACTTCG
AACGACGTCAACGCCTATCTCCGGGCACACGGCGGCGGCGACTACACCGCCAAGGATTACCGCACCTGGGCCGGCAGCGC
GCTCGCGCTCGCGCTATTCCGTCGCCTGCCCTGGCAGAGCCGCGGCGAGGCCGAGCGCCGGGTCTCCGGGGTCATCGCCG
AGGTCGCCGCGCAGCTCGGCAACACGCCGGCGGTCTGCAGGAAGTGTTACGTCCATCCGGCCATCGTCGAGGCCTTCGTC
GCGGGCGAACTCGCGGCCCTCGCCCGTCCGCGGCGCCGCAAGCATCTGAACGCCGACGAGGCCGCGCTGCTCGGCTTTCT
CGAAACGCAGCACGAGGCGCGCTGCGCCTGA

Upstream 100 bases:

>100_bases
TCACGATCCTTGAACTGTCCCGCATCGGAGAAGCCATGACGCCCTGCGCACGACGCGCTCCGCCCCGTCTCGCGTTGTCG
CCGGCGCCGCGCGGCAGCCG

Downstream 100 bases:

>100_bases
GCTGCCGCGCAGCGCCGGCCCAGGTATCTGGCCAAGGCACGGCGCTTGCTGGTGCGGAACAGGGACCAAACCGCCCGGCG
TTCCGGGCGCCCGCGCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerase ; Eukaryotic-Like DNA poisomerase I; DNA poisomerasei; -Like DNA poisomerase I; Type I DNA poisomerase

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MSAYPARATPPRNAPSDPRASAPEGLNYIGAGTPGIRRVRRGARFVYLDPDGRRIRDREEIARIARLAIPPAYVDVWICA
DPRGHLQATGRDARGRKQYRYHPAWIAARGTDKYCRMLGFGHALPKLRAAIAAHLDAPGLAADKVMATVVALLEQTLIRV
GNPQYARENASFGLTTLQNRHVAVRGSAVQFRFTGKSGIKHCRTLEHPRLARILKRCQELPGQQLFQYLDTDGHPRPVTS
NDVNAYLRAHGGGDYTAKDYRTWAGSALALALFRRLPWQSRGEAERRVSGVIAEVAAQLGNTPAVCRKCYVHPAIVEAFV
AGELAALARPRRRKHLNADEAALLGFLETQHEARCA

Sequences:

>Translated_356_residues
MSAYPARATPPRNAPSDPRASAPEGLNYIGAGTPGIRRVRRGARFVYLDPDGRRIRDREEIARIARLAIPPAYVDVWICA
DPRGHLQATGRDARGRKQYRYHPAWIAARGTDKYCRMLGFGHALPKLRAAIAAHLDAPGLAADKVMATVVALLEQTLIRV
GNPQYARENASFGLTTLQNRHVAVRGSAVQFRFTGKSGIKHCRTLEHPRLARILKRCQELPGQQLFQYLDTDGHPRPVTS
NDVNAYLRAHGGGDYTAKDYRTWAGSALALALFRRLPWQSRGEAERRVSGVIAEVAAQLGNTPAVCRKCYVHPAIVEAFV
AGELAALARPRRRKHLNADEAALLGFLETQHEARCA
>Mature_355_residues
SAYPARATPPRNAPSDPRASAPEGLNYIGAGTPGIRRVRRGARFVYLDPDGRRIRDREEIARIARLAIPPAYVDVWICAD
PRGHLQATGRDARGRKQYRYHPAWIAARGTDKYCRMLGFGHALPKLRAAIAAHLDAPGLAADKVMATVVALLEQTLIRVG
NPQYARENASFGLTTLQNRHVAVRGSAVQFRFTGKSGIKHCRTLEHPRLARILKRCQELPGQQLFQYLDTDGHPRPVTSN
DVNAYLRAHGGGDYTAKDYRTWAGSALALALFRRLPWQSRGEAERRVSGVIAEVAAQLGNTPAVCRKCYVHPAIVEAFVA
GELAALARPRRRKHLNADEAALLGFLETQHEARCA

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39296; Mature: 39165

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYPARATPPRNAPSDPRASAPEGLNYIGAGTPGIRRVRRGARFVYLDPDGRRIRDREE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHH
IARIARLAIPPAYVDVWICADPRGHLQATGRDARGRKQYRYHPAWIAARGTDKYCRMLGF
HHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCCCEEECCEEEEECCCHHHHHHHHH
GHALPKLRAAIAAHLDAPGLAADKVMATVVALLEQTLIRVGNPQYARENASFGLTTLQNR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEECCC
HVAVRGSAVQFRFTGKSGIKHCRTLEHPRLARILKRCQELPGQQLFQYLDTDGHPRPVTS
EEEEECCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC
NDVNAYLRAHGGGDYTAKDYRTWAGSALALALFRRLPWQSRGEAERRVSGVIAEVAAQLG
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
NTPAVCRKCYVHPAIVEAFVAGELAALARPRRRKHLNADEAALLGFLETQHEARCA
CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAYPARATPPRNAPSDPRASAPEGLNYIGAGTPGIRRVRRGARFVYLDPDGRRIRDREE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHH
IARIARLAIPPAYVDVWICADPRGHLQATGRDARGRKQYRYHPAWIAARGTDKYCRMLGF
HHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCCCEEECCEEEEECCCHHHHHHHHH
GHALPKLRAAIAAHLDAPGLAADKVMATVVALLEQTLIRVGNPQYARENASFGLTTLQNR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEECCC
HVAVRGSAVQFRFTGKSGIKHCRTLEHPRLARILKRCQELPGQQLFQYLDTDGHPRPVTS
EEEEECCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC
NDVNAYLRAHGGGDYTAKDYRTWAGSALALALFRRLPWQSRGEAERRVSGVIAEVAAQLG
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
NTPAVCRKCYVHPAIVEAFVAGELAALARPRRRKHLNADEAALLGFLETQHEARCA
CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA