The gene/protein map for NC_007404 is currently unavailable.
Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74316738

Identifier: 74316738

GI number: 74316738

Start: 760524

End: 762446

Strand: Reverse

Name: 74316738

Synonym: Tbd_0720

Alternate gene names: NA

Gene position: 762446-760524 (Counterclockwise)

Preceding gene: 74316739

Following gene: 74316737

Centisome position: 26.2

GC content: 71.29

Gene sequence:

>1923_bases
ATGAACGCGCGCGCCCCGAAGACCGCCCTCGCCGCCGCCCCGTCACGCAACGACGACGCGTCGCCGGAGGCCTACATCTG
CCGGCGCGTCGTCGACGCCCTGCTGCGCGAAGACGTGCGTGCCTGCGTGAGCCGGGCGACGGTGCACGCGGGCGGTGCCA
CTCTCACGGGCGGCGTCGCCCCCGCGGTCGGCGCCACTCTCACTGGCGGCGCCGCCCTCGCGGAAGGCGCCGGGTCGCGG
GCGCTCGCCCGGTTCGGCGACGCCGACACCTGGCTCGAGGTCGGCCATTTCGGCGGCGGCGTGCTGTGGATTCCGGTCGT
CGCGTCGACCTTCATGCAGGCCTGGCGCGGCGCCGCCCTGCCGCCCGTATGGGACGACGGTCGACGATGCGAAGCGCTGC
ACACGGTCGACGCCGTTCTCGCCCGCTTCCAGCAAGGCCTCGAAGCGCCGGCCGCCGAGCGCTTCGCCGCCTTCGCCGAA
GAATGCCGCGTCGCCGTCGAACACCGCCGTGCCGGCGAAGCGGAACGCGAGCGCTGGTTCGCCGAATTCCGCGCGGCCTA
CGGGCGCGCGTCCGGCGCCGGGTTGCCGAACTGGCACGCGCGCCTGTTGCACTACGACCGCCTCGGCGCTTTCCTCGACC
ATCCGTTCTATCCGACCGCACGCGCCAAGCTCGGCTTCGATCGCGACGCGCTCGAAGCCTACGGTCCCGAGTTCCAGCGC
CCCTTCATGCTGCGCTGGCTCGCGGTGCCGCGCGATCTCCATCATCCGAGCGCCAAAGACGGCGTGGCGCCGCCCGCGGT
CTGGCCGACCGTCGAAGCCGTCGGCCTGCCGGCGGCGATGGCCGCCACCCATGTCCTGGTCCCGGTGCACCCCTTCGTCT
GGGCGCATCAGCTCGACGCCTTCCTCGACGAGGCCGGGCTGCATGAAACCGTCGTGCGCGCGCCGGACCCCTATCTCGCG
GTCGCGCCGACGCTGTCGGTGCGCACGGTCGTGCTGCTCGACGCGCCGGAATGGCATCTGAAGCTTCCGCTGACGATCCG
CACGCTCGGCGCCAAGAACATCCGCACGATAAAGCCGAGCACGATCCACGACGGCCACCGCTTCCAGACGCTGCTCGCCG
ACATCGCAGTGCGCGAGCCTGCGCTCGACGGTCGCGTGCTGCTGACCTTCGAGGGCTGCGGCGCGCACGTCGACCACCGC
CCCTTCCTCGGCCACATCCTGCGCCGCTACCCGGTCGCCGCGCTCGGCGAGAGCACGCTGGTTCCGGTCGCGAGCCTGCT
CGCCGCGGCGCCCGGCGGCACCACGGTGGCCGAAGAAATCGCGGCGGAATTCTATGCGGGCGACCTCGCTGCCTTCTTCG
ACGACTACCTCGATCTCACGCTGCGACTGCACCTCACGCTGTGGCTGCGGTATGGCGTCGCGCTCGAATCGAACCAGCAG
AACTCGGTCCTCGTCCTCAGCCGGAATGCCCCGCGCCTGCGCCTGCTGCTGAAGGACAACGACGCGGGGCGCATCCATTT
CGACGCCCTCGCCAGCCGCTGGCCCGATCTCGCCCAGCGCGTCGCCGGCCTGCATGACCGCAGGATATTCGTCGCCGACA
CGCTACCCCTCGCGCAGATGTTCACGACGATCACGCTGCAGCTCAACATCGCGGTGCTCGCCGAGGGCTACGCCGAACGC
CTCGGTGTGCCTGCCGGCACGCTGCACGGGCGCGTGCGCATGCGCCTCGCGGGCGTGCTCGACGAACTCGCGGCCGCAGG
CGAAGACGTCGCGCCGGCGCGCCACGTGCTGCTCGAGGACGACCGGCTTTACCTCAAATATCTGCTGATCGCGGCGACCC
TCGCCGAGAAAAGCGAGACCGGCGCGGCCGACGTCAACAAGTTCTACGGCCGCAGCGCGCCGAACTTCCTGAAGCCGGCA
TGA

Upstream 100 bases:

>100_bases
AGGACTACCTCGGCGTGCTGCGCGGCACGGGCGCCGACGTCCAGCGGCTGGGGCTCGAGATGGACCGGCTCAGCAGCGGC
CTCGCGTGGACGATCGCGGC

Downstream 100 bases:

>100_bases
GCCTCGACACGCGGCGCGTCGTCGCCACGATCATGGTCTGCCATTTCGTCGCCGCGTTCGCGGCGCTCGGGATGCCGCCT
TTCTTTGCGCTGATCCTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:

>640_residues
MNARAPKTALAAAPSRNDDASPEAYICRRVVDALLREDVRACVSRATVHAGGATLTGGVAPAVGATLTGGAALAEGAGSR
ALARFGDADTWLEVGHFGGGVLWIPVVASTFMQAWRGAALPPVWDDGRRCEALHTVDAVLARFQQGLEAPAAERFAAFAE
ECRVAVEHRRAGEAERERWFAEFRAAYGRASGAGLPNWHARLLHYDRLGAFLDHPFYPTARAKLGFDRDALEAYGPEFQR
PFMLRWLAVPRDLHHPSAKDGVAPPAVWPTVEAVGLPAAMAATHVLVPVHPFVWAHQLDAFLDEAGLHETVVRAPDPYLA
VAPTLSVRTVVLLDAPEWHLKLPLTIRTLGAKNIRTIKPSTIHDGHRFQTLLADIAVREPALDGRVLLTFEGCGAHVDHR
PFLGHILRRYPVAALGESTLVPVASLLAAAPGGTTVAEEIAAEFYAGDLAAFFDDYLDLTLRLHLTLWLRYGVALESNQQ
NSVLVLSRNAPRLRLLLKDNDAGRIHFDALASRWPDLAQRVAGLHDRRIFVADTLPLAQMFTTITLQLNIAVLAEGYAER
LGVPAGTLHGRVRMRLAGVLDELAAAGEDVAPARHVLLEDDRLYLKYLLIAATLAEKSETGAADVNKFYGRSAPNFLKPA

Sequences:

>Translated_640_residues
MNARAPKTALAAAPSRNDDASPEAYICRRVVDALLREDVRACVSRATVHAGGATLTGGVAPAVGATLTGGAALAEGAGSR
ALARFGDADTWLEVGHFGGGVLWIPVVASTFMQAWRGAALPPVWDDGRRCEALHTVDAVLARFQQGLEAPAAERFAAFAE
ECRVAVEHRRAGEAERERWFAEFRAAYGRASGAGLPNWHARLLHYDRLGAFLDHPFYPTARAKLGFDRDALEAYGPEFQR
PFMLRWLAVPRDLHHPSAKDGVAPPAVWPTVEAVGLPAAMAATHVLVPVHPFVWAHQLDAFLDEAGLHETVVRAPDPYLA
VAPTLSVRTVVLLDAPEWHLKLPLTIRTLGAKNIRTIKPSTIHDGHRFQTLLADIAVREPALDGRVLLTFEGCGAHVDHR
PFLGHILRRYPVAALGESTLVPVASLLAAAPGGTTVAEEIAAEFYAGDLAAFFDDYLDLTLRLHLTLWLRYGVALESNQQ
NSVLVLSRNAPRLRLLLKDNDAGRIHFDALASRWPDLAQRVAGLHDRRIFVADTLPLAQMFTTITLQLNIAVLAEGYAER
LGVPAGTLHGRVRMRLAGVLDELAAAGEDVAPARHVLLEDDRLYLKYLLIAATLAEKSETGAADVNKFYGRSAPNFLKPA
>Mature_640_residues
MNARAPKTALAAAPSRNDDASPEAYICRRVVDALLREDVRACVSRATVHAGGATLTGGVAPAVGATLTGGAALAEGAGSR
ALARFGDADTWLEVGHFGGGVLWIPVVASTFMQAWRGAALPPVWDDGRRCEALHTVDAVLARFQQGLEAPAAERFAAFAE
ECRVAVEHRRAGEAERERWFAEFRAAYGRASGAGLPNWHARLLHYDRLGAFLDHPFYPTARAKLGFDRDALEAYGPEFQR
PFMLRWLAVPRDLHHPSAKDGVAPPAVWPTVEAVGLPAAMAATHVLVPVHPFVWAHQLDAFLDEAGLHETVVRAPDPYLA
VAPTLSVRTVVLLDAPEWHLKLPLTIRTLGAKNIRTIKPSTIHDGHRFQTLLADIAVREPALDGRVLLTFEGCGAHVDHR
PFLGHILRRYPVAALGESTLVPVASLLAAAPGGTTVAEEIAAEFYAGDLAAFFDDYLDLTLRLHLTLWLRYGVALESNQQ
NSVLVLSRNAPRLRLLLKDNDAGRIHFDALASRWPDLAQRVAGLHDRRIFVADTLPLAQMFTTITLQLNIAVLAEGYAER
LGVPAGTLHGRVRMRLAGVLDELAAAGEDVAPARHVLLEDDRLYLKYLLIAATLAEKSETGAADVNKFYGRSAPNFLKPA

Specific function: Unknown

COG id: COG4264

COG function: function code Q; Siderophore synthetase component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iucC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007310
- InterPro:   IPR022770 [H]

Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]

EC number: NA

Molecular weight: Translated: 69410; Mature: 69410

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARAPKTALAAAPSRNDDASPEAYICRRVVDALLREDVRACVSRATVHAGGATLTGGVA
CCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCCCC
PAVGATLTGGAALAEGAGSRALARFGDADTWLEVGHFGGGVLWIPVVASTFMQAWRGAAL
HHHCCCCCCCHHHHCCCCCHHHHHCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCC
PPVWDDGRRCEALHTVDAVLARFQQGLEAPAAERFAAFAEECRVAVEHRRAGEAERERWF
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AEFRAAYGRASGAGLPNWHARLLHYDRLGAFLDHPFYPTARAKLGFDRDALEAYGPEFQR
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHCCCCCCC
PFMLRWLAVPRDLHHPSAKDGVAPPAVWPTVEAVGLPAAMAATHVLVPVHPFVWAHQLDA
CHHHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHEEEEECCHHHHHHHHHH
FLDEAGLHETVVRAPDPYLAVAPTLSVRTVVLLDAPEWHLKLPLTIRTLGAKNIRTIKPS
HHHHCCCHHHHHCCCCCCEEECCCCCEEEEEEEECCCCEEECCEEEEECCCCCCEECCCC
TIHDGHRFQTLLADIAVREPALDGRVLLTFEGCGAHVDHRPFLGHILRRYPVAALGESTL
CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHCCCCHH
VPVASLLAAAPGGTTVAEEIAAEFYAGDLAAFFDDYLDLTLRLHLTLWLRYGVALESNQQ
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCC
NSVLVLSRNAPRLRLLLKDNDAGRIHFDALASRWPDLAQRVAGLHDRRIFVADTLPLAQM
CCEEEEECCCCEEEEEEECCCCCEEEHHHHHHCCHHHHHHHHCCCCCEEEEECCCCHHHH
FTTITLQLNIAVLAEGYAERLGVPAGTLHGRVRMRLAGVLDELAAAGEDVAPARHVLLED
HHEEEEEEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECC
DRLYLKYLLIAATLAEKSETGAADVNKFYGRSAPNFLKPA
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNARAPKTALAAAPSRNDDASPEAYICRRVVDALLREDVRACVSRATVHAGGATLTGGVA
CCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCCCC
PAVGATLTGGAALAEGAGSRALARFGDADTWLEVGHFGGGVLWIPVVASTFMQAWRGAAL
HHHCCCCCCCHHHHCCCCCHHHHHCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCC
PPVWDDGRRCEALHTVDAVLARFQQGLEAPAAERFAAFAEECRVAVEHRRAGEAERERWF
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AEFRAAYGRASGAGLPNWHARLLHYDRLGAFLDHPFYPTARAKLGFDRDALEAYGPEFQR
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHCCCCCCC
PFMLRWLAVPRDLHHPSAKDGVAPPAVWPTVEAVGLPAAMAATHVLVPVHPFVWAHQLDA
CHHHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHEEEEECCHHHHHHHHHH
FLDEAGLHETVVRAPDPYLAVAPTLSVRTVVLLDAPEWHLKLPLTIRTLGAKNIRTIKPS
HHHHCCCHHHHHCCCCCCEEECCCCCEEEEEEEECCCCEEECCEEEEECCCCCCEECCCC
TIHDGHRFQTLLADIAVREPALDGRVLLTFEGCGAHVDHRPFLGHILRRYPVAALGESTL
CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHCCCCHH
VPVASLLAAAPGGTTVAEEIAAEFYAGDLAAFFDDYLDLTLRLHLTLWLRYGVALESNQQ
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCC
NSVLVLSRNAPRLRLLLKDNDAGRIHFDALASRWPDLAQRVAGLHDRRIFVADTLPLAQM
CCEEEEECCCCEEEEEEECCCCCEEEHHHHHHCCHHHHHHHHCCCCCEEEEECCCCHHHH
FTTITLQLNIAVLAEGYAERLGVPAGTLHGRVRMRLAGVLDELAAAGEDVAPARHVLLED
HHEEEEEEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECC
DRLYLKYLLIAATLAEKSETGAADVNKFYGRSAPNFLKPA
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]