| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316738
Identifier: 74316738
GI number: 74316738
Start: 760524
End: 762446
Strand: Reverse
Name: 74316738
Synonym: Tbd_0720
Alternate gene names: NA
Gene position: 762446-760524 (Counterclockwise)
Preceding gene: 74316739
Following gene: 74316737
Centisome position: 26.2
GC content: 71.29
Gene sequence:
>1923_bases ATGAACGCGCGCGCCCCGAAGACCGCCCTCGCCGCCGCCCCGTCACGCAACGACGACGCGTCGCCGGAGGCCTACATCTG CCGGCGCGTCGTCGACGCCCTGCTGCGCGAAGACGTGCGTGCCTGCGTGAGCCGGGCGACGGTGCACGCGGGCGGTGCCA CTCTCACGGGCGGCGTCGCCCCCGCGGTCGGCGCCACTCTCACTGGCGGCGCCGCCCTCGCGGAAGGCGCCGGGTCGCGG GCGCTCGCCCGGTTCGGCGACGCCGACACCTGGCTCGAGGTCGGCCATTTCGGCGGCGGCGTGCTGTGGATTCCGGTCGT CGCGTCGACCTTCATGCAGGCCTGGCGCGGCGCCGCCCTGCCGCCCGTATGGGACGACGGTCGACGATGCGAAGCGCTGC ACACGGTCGACGCCGTTCTCGCCCGCTTCCAGCAAGGCCTCGAAGCGCCGGCCGCCGAGCGCTTCGCCGCCTTCGCCGAA GAATGCCGCGTCGCCGTCGAACACCGCCGTGCCGGCGAAGCGGAACGCGAGCGCTGGTTCGCCGAATTCCGCGCGGCCTA CGGGCGCGCGTCCGGCGCCGGGTTGCCGAACTGGCACGCGCGCCTGTTGCACTACGACCGCCTCGGCGCTTTCCTCGACC ATCCGTTCTATCCGACCGCACGCGCCAAGCTCGGCTTCGATCGCGACGCGCTCGAAGCCTACGGTCCCGAGTTCCAGCGC CCCTTCATGCTGCGCTGGCTCGCGGTGCCGCGCGATCTCCATCATCCGAGCGCCAAAGACGGCGTGGCGCCGCCCGCGGT CTGGCCGACCGTCGAAGCCGTCGGCCTGCCGGCGGCGATGGCCGCCACCCATGTCCTGGTCCCGGTGCACCCCTTCGTCT GGGCGCATCAGCTCGACGCCTTCCTCGACGAGGCCGGGCTGCATGAAACCGTCGTGCGCGCGCCGGACCCCTATCTCGCG GTCGCGCCGACGCTGTCGGTGCGCACGGTCGTGCTGCTCGACGCGCCGGAATGGCATCTGAAGCTTCCGCTGACGATCCG CACGCTCGGCGCCAAGAACATCCGCACGATAAAGCCGAGCACGATCCACGACGGCCACCGCTTCCAGACGCTGCTCGCCG ACATCGCAGTGCGCGAGCCTGCGCTCGACGGTCGCGTGCTGCTGACCTTCGAGGGCTGCGGCGCGCACGTCGACCACCGC CCCTTCCTCGGCCACATCCTGCGCCGCTACCCGGTCGCCGCGCTCGGCGAGAGCACGCTGGTTCCGGTCGCGAGCCTGCT CGCCGCGGCGCCCGGCGGCACCACGGTGGCCGAAGAAATCGCGGCGGAATTCTATGCGGGCGACCTCGCTGCCTTCTTCG ACGACTACCTCGATCTCACGCTGCGACTGCACCTCACGCTGTGGCTGCGGTATGGCGTCGCGCTCGAATCGAACCAGCAG AACTCGGTCCTCGTCCTCAGCCGGAATGCCCCGCGCCTGCGCCTGCTGCTGAAGGACAACGACGCGGGGCGCATCCATTT CGACGCCCTCGCCAGCCGCTGGCCCGATCTCGCCCAGCGCGTCGCCGGCCTGCATGACCGCAGGATATTCGTCGCCGACA CGCTACCCCTCGCGCAGATGTTCACGACGATCACGCTGCAGCTCAACATCGCGGTGCTCGCCGAGGGCTACGCCGAACGC CTCGGTGTGCCTGCCGGCACGCTGCACGGGCGCGTGCGCATGCGCCTCGCGGGCGTGCTCGACGAACTCGCGGCCGCAGG CGAAGACGTCGCGCCGGCGCGCCACGTGCTGCTCGAGGACGACCGGCTTTACCTCAAATATCTGCTGATCGCGGCGACCC TCGCCGAGAAAAGCGAGACCGGCGCGGCCGACGTCAACAAGTTCTACGGCCGCAGCGCGCCGAACTTCCTGAAGCCGGCA TGA
Upstream 100 bases:
>100_bases AGGACTACCTCGGCGTGCTGCGCGGCACGGGCGCCGACGTCCAGCGGCTGGGGCTCGAGATGGACCGGCTCAGCAGCGGC CTCGCGTGGACGATCGCGGC
Downstream 100 bases:
>100_bases GCCTCGACACGCGGCGCGTCGTCGCCACGATCATGGTCTGCCATTTCGTCGCCGCGTTCGCGGCGCTCGGGATGCCGCCT TTCTTTGCGCTGATCCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MNARAPKTALAAAPSRNDDASPEAYICRRVVDALLREDVRACVSRATVHAGGATLTGGVAPAVGATLTGGAALAEGAGSR ALARFGDADTWLEVGHFGGGVLWIPVVASTFMQAWRGAALPPVWDDGRRCEALHTVDAVLARFQQGLEAPAAERFAAFAE ECRVAVEHRRAGEAERERWFAEFRAAYGRASGAGLPNWHARLLHYDRLGAFLDHPFYPTARAKLGFDRDALEAYGPEFQR PFMLRWLAVPRDLHHPSAKDGVAPPAVWPTVEAVGLPAAMAATHVLVPVHPFVWAHQLDAFLDEAGLHETVVRAPDPYLA VAPTLSVRTVVLLDAPEWHLKLPLTIRTLGAKNIRTIKPSTIHDGHRFQTLLADIAVREPALDGRVLLTFEGCGAHVDHR PFLGHILRRYPVAALGESTLVPVASLLAAAPGGTTVAEEIAAEFYAGDLAAFFDDYLDLTLRLHLTLWLRYGVALESNQQ NSVLVLSRNAPRLRLLLKDNDAGRIHFDALASRWPDLAQRVAGLHDRRIFVADTLPLAQMFTTITLQLNIAVLAEGYAER LGVPAGTLHGRVRMRLAGVLDELAAAGEDVAPARHVLLEDDRLYLKYLLIAATLAEKSETGAADVNKFYGRSAPNFLKPA
Sequences:
>Translated_640_residues MNARAPKTALAAAPSRNDDASPEAYICRRVVDALLREDVRACVSRATVHAGGATLTGGVAPAVGATLTGGAALAEGAGSR ALARFGDADTWLEVGHFGGGVLWIPVVASTFMQAWRGAALPPVWDDGRRCEALHTVDAVLARFQQGLEAPAAERFAAFAE ECRVAVEHRRAGEAERERWFAEFRAAYGRASGAGLPNWHARLLHYDRLGAFLDHPFYPTARAKLGFDRDALEAYGPEFQR PFMLRWLAVPRDLHHPSAKDGVAPPAVWPTVEAVGLPAAMAATHVLVPVHPFVWAHQLDAFLDEAGLHETVVRAPDPYLA VAPTLSVRTVVLLDAPEWHLKLPLTIRTLGAKNIRTIKPSTIHDGHRFQTLLADIAVREPALDGRVLLTFEGCGAHVDHR PFLGHILRRYPVAALGESTLVPVASLLAAAPGGTTVAEEIAAEFYAGDLAAFFDDYLDLTLRLHLTLWLRYGVALESNQQ NSVLVLSRNAPRLRLLLKDNDAGRIHFDALASRWPDLAQRVAGLHDRRIFVADTLPLAQMFTTITLQLNIAVLAEGYAER LGVPAGTLHGRVRMRLAGVLDELAAAGEDVAPARHVLLEDDRLYLKYLLIAATLAEKSETGAADVNKFYGRSAPNFLKPA >Mature_640_residues MNARAPKTALAAAPSRNDDASPEAYICRRVVDALLREDVRACVSRATVHAGGATLTGGVAPAVGATLTGGAALAEGAGSR ALARFGDADTWLEVGHFGGGVLWIPVVASTFMQAWRGAALPPVWDDGRRCEALHTVDAVLARFQQGLEAPAAERFAAFAE ECRVAVEHRRAGEAERERWFAEFRAAYGRASGAGLPNWHARLLHYDRLGAFLDHPFYPTARAKLGFDRDALEAYGPEFQR PFMLRWLAVPRDLHHPSAKDGVAPPAVWPTVEAVGLPAAMAATHVLVPVHPFVWAHQLDAFLDEAGLHETVVRAPDPYLA VAPTLSVRTVVLLDAPEWHLKLPLTIRTLGAKNIRTIKPSTIHDGHRFQTLLADIAVREPALDGRVLLTFEGCGAHVDHR PFLGHILRRYPVAALGESTLVPVASLLAAAPGGTTVAEEIAAEFYAGDLAAFFDDYLDLTLRLHLTLWLRYGVALESNQQ NSVLVLSRNAPRLRLLLKDNDAGRIHFDALASRWPDLAQRVAGLHDRRIFVADTLPLAQMFTTITLQLNIAVLAEGYAER LGVPAGTLHGRVRMRLAGVLDELAAAGEDVAPARHVLLEDDRLYLKYLLIAATLAEKSETGAADVNKFYGRSAPNFLKPA
Specific function: Unknown
COG id: COG4264
COG function: function code Q; Siderophore synthetase component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007310 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]
EC number: NA
Molecular weight: Translated: 69410; Mature: 69410
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARAPKTALAAAPSRNDDASPEAYICRRVVDALLREDVRACVSRATVHAGGATLTGGVA CCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCCCC PAVGATLTGGAALAEGAGSRALARFGDADTWLEVGHFGGGVLWIPVVASTFMQAWRGAAL HHHCCCCCCCHHHHCCCCCHHHHHCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCC PPVWDDGRRCEALHTVDAVLARFQQGLEAPAAERFAAFAEECRVAVEHRRAGEAERERWF CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AEFRAAYGRASGAGLPNWHARLLHYDRLGAFLDHPFYPTARAKLGFDRDALEAYGPEFQR HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHCCCCCCC PFMLRWLAVPRDLHHPSAKDGVAPPAVWPTVEAVGLPAAMAATHVLVPVHPFVWAHQLDA CHHHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHEEEEECCHHHHHHHHHH FLDEAGLHETVVRAPDPYLAVAPTLSVRTVVLLDAPEWHLKLPLTIRTLGAKNIRTIKPS HHHHCCCHHHHHCCCCCCEEECCCCCEEEEEEEECCCCEEECCEEEEECCCCCCEECCCC TIHDGHRFQTLLADIAVREPALDGRVLLTFEGCGAHVDHRPFLGHILRRYPVAALGESTL CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHCCCCHH VPVASLLAAAPGGTTVAEEIAAEFYAGDLAAFFDDYLDLTLRLHLTLWLRYGVALESNQQ HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCC NSVLVLSRNAPRLRLLLKDNDAGRIHFDALASRWPDLAQRVAGLHDRRIFVADTLPLAQM CCEEEEECCCCEEEEEEECCCCCEEEHHHHHHCCHHHHHHHHCCCCCEEEEECCCCHHHH FTTITLQLNIAVLAEGYAERLGVPAGTLHGRVRMRLAGVLDELAAAGEDVAPARHVLLED HHEEEEEEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECC DRLYLKYLLIAATLAEKSETGAADVNKFYGRSAPNFLKPA CHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNARAPKTALAAAPSRNDDASPEAYICRRVVDALLREDVRACVSRATVHAGGATLTGGVA CCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCCCC PAVGATLTGGAALAEGAGSRALARFGDADTWLEVGHFGGGVLWIPVVASTFMQAWRGAAL HHHCCCCCCCHHHHCCCCCHHHHHCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCC PPVWDDGRRCEALHTVDAVLARFQQGLEAPAAERFAAFAEECRVAVEHRRAGEAERERWF CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AEFRAAYGRASGAGLPNWHARLLHYDRLGAFLDHPFYPTARAKLGFDRDALEAYGPEFQR HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHCCCCCCC PFMLRWLAVPRDLHHPSAKDGVAPPAVWPTVEAVGLPAAMAATHVLVPVHPFVWAHQLDA CHHHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHEEEEECCHHHHHHHHHH FLDEAGLHETVVRAPDPYLAVAPTLSVRTVVLLDAPEWHLKLPLTIRTLGAKNIRTIKPS HHHHCCCHHHHHCCCCCCEEECCCCCEEEEEEEECCCCEEECCEEEEECCCCCCEECCCC TIHDGHRFQTLLADIAVREPALDGRVLLTFEGCGAHVDHRPFLGHILRRYPVAALGESTL CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHCCCCHH VPVASLLAAAPGGTTVAEEIAAEFYAGDLAAFFDDYLDLTLRLHLTLWLRYGVALESNQQ HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCC NSVLVLSRNAPRLRLLLKDNDAGRIHFDALASRWPDLAQRVAGLHDRRIFVADTLPLAQM CCEEEEECCCCEEEEEEECCCCCEEEHHHHHHCCHHHHHHHHCCCCCEEEEECCCCHHHH FTTITLQLNIAVLAEGYAERLGVPAGTLHGRVRMRLAGVLDELAAAGEDVAPARHVLLED HHEEEEEEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECC DRLYLKYLLIAATLAEKSETGAADVNKFYGRSAPNFLKPA CHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]